Factsheet for VIT_00s1353g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3
nucleus 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28297	Soybean	plasma membrane	82.3	82.71
KRH77190	Soybean	plasma membrane	81.91	82.31
KRH04350	Soybean	plasma membrane	81.51	82.08
KRH58184	Soybean	plasma membrane	80.83	81.55
PGSC0003DMT400078706	Potato	plasma membrane	80.04	80.04
Solyc02g091840.2.1	Tomato	extracellular	79.65	79.72
CDY45620	Canola	plasma membrane	76.2	79.65
CDY08759	Canola	plasma membrane	76.01	79.61
AT5G65700.1	Thale cress	plasma membrane	78.07	79.16
PGSC0003DMT400043020	Potato	plasma membrane	79.55	79.16
Bra024413.1-P	Field mustard	plasma membrane, plastid	77.29	78.84
GSMUA_Achr4P14590_001	Banana	cytosol	54.57	77.51
GSMUA_Achr4P03140_001	Banana	plasma membrane	57.62	76.8
CDY23037	Canola	plasma membrane	72.76	76.53
AT3G49670.1	Thale cress	plasma membrane	75.02	76.15
CDY02112	Canola	plasma membrane	72.37	75.95
Os03t0773700-01	Rice	plasma membrane	65.78	75.59
Bra012925.1-P	Field mustard	plasma membrane	73.65	75.43
HORVU5Hr1G098840.2	Barley	cytosol, plasma membrane	63.91	73.7
GSMUA_Achr5P02010_001	Banana	plasma membrane, vacuole	52.9	73.2
EER93376	Sorghum	plasma membrane	73.25	72.33
HORVU2Hr1G061090.3	Barley	plasma membrane, plastid	68.04	71.71
Zm00001d034240_P004	Maize	plasma membrane	72.96	71.69
GSMUA_Achr4P07370_001	Banana	plasma membrane	54.77	71.14
Zm00001d013162_P001	Maize	plasma membrane	71.78	71.01
Os07t0134200-01	Rice	plasma membrane	70.99	70.58
GSMUA_Achr7P00790_001	Banana	plasma membrane	53.98	70.29
GSMUA_Achr4P32160_001	Banana	plasma membrane	51.62	70.09
EER97948	Sorghum	plasma membrane	70.8	69.84
TraesCS2B01G266700.1	Wheat	plasma membrane	70.01	69.6
TraesCS2A01G268300.1	Wheat	vacuole	69.71	69.31
TraesCS5D01G417400.1	Wheat	plasma membrane	70.3	69.08
TraesCS5B01G412400.1	Wheat	plasma membrane	70.01	69.06
TraesCS5A01G407500.2	Wheat	plasma membrane	69.91	68.83
Zm00001d018752_P001	Maize	mitochondrion, plasma membrane	69.81	68.47
GSMUA_Achr7P27590_001	Banana	golgi, plasma membrane	41.59	68.23
TraesCS2D01G255900.1	Wheat	plastid	69.71	66.57
GSMUA_Achr3P30640_001	Banana	plasma membrane	52.31	64.64
HORVU4Hr1G065620.1	Barley	plasma membrane	62.05	63.42
TraesCS4B01G234600.1	Wheat	plasma membrane	62.14	63.39
TraesCS4A01G059000.1	Wheat	plasma membrane	62.05	63.29
TraesCS4D01G235800.1	Wheat	plasma membrane	62.05	63.29
Os03t0228800-01	Rice	plasma membrane	62.34	62.96
KXG39823	Sorghum	plasma membrane	61.75	62.74
Zm00001d028317_P001	Maize	plasma membrane	61.95	60.99
VIT_01s0010g00330.t01	Wine grape	plasma membrane	56.54	58.2
VIT_12s0035g00990.t01	Wine grape	plasma membrane	54.47	56.76
VIT_18s0001g14610.t01	Wine grape	plasma membrane	53.59	55.61
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	40.61	39.79
VIT_18s0001g02590.t01	Wine grape	plastid	33.83	36.71
VIT_04s0008g03240.t01	Wine grape	plasma membrane	34.41	36.19
VIT_05s0051g00460.t01	Wine grape	plasma membrane	38.64	35.57
VIT_19s0027g00010.t01	Wine grape	plasma membrane	37.95	34.74
VIT_18s0001g15720.t01	Wine grape	plasma membrane	36.09	33.73
VIT_07s0005g05420.t01	Wine grape	plasma membrane	31.86	33.16
VIT_11s0149g00090.t01	Wine grape	plasma membrane	31.37	32.82
VIT_17s0000g08900.t01	Wine grape	plasma membrane	35.0	32.72
VIT_05s0051g00540.t01	Wine grape	plasma membrane	36.58	32.6
VIT_09s0018g01900.t01	Wine grape	plasma membrane	31.76	32.01
VIT_19s0015g01120.t01	Wine grape	plasma membrane	31.17	31.02
VIT_01s0010g00380.t01	Wine grape	plasma membrane	35.2	28.55
VIT_07s0005g04390.t01	Wine grape	plasma membrane	37.27	26.73
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	27.83	26.7

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100855393	wikigene:100855393	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB59174	ProteinID:CCB59174.1	UniProt:F6HWW0	EMBL:FN596319	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100855393	wikigene:LOC100855393	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF49	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TIGR:TC68389	TMHMM:TMhelix	UniParc:UPI000210A1FF	ArrayExpress:VIT_00s1353g00010	EnsemblPlantsGene:VIT_00s1353g00010	EnsemblPlants:VIT_00s1353g00010.t01
unigene:Vvi.9727	RefSeq:XP_003635561	RefSeq:XP_003635561.1	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:38754848..38758800

Molecular Weight (calculated)

111365.0 Da

IEP (calculated)

6.194

GRAVY (calculated)

-0.055

Length

1017 amino acids

Sequence
(BLAST)

0001: MRFVILVLLL HLHFHYHSLA ATPPRIPEYR ALLSLRTAIS YDPESPLAAW NISTSHCTWT GVTCDARRHV VALNLSGLNL SGSLSSDIAH LRFLVNLTLA
0101: ANQFVGPIPP ELSLVSGLRQ LNLSNNVFNE TFPSQLARLK RLEVLDLYNN NMTGDLPLAV TEMPNLRHLH LGGNFFTGII PPAYGQWEFL EYLAVSGNEL
0201: HGPIPPEIGN LTSLQQLYVG YYNTYDGGIP PEIGNLTSLV RLDMANCLLS GEIPPEIGKL QNLDTLFLQV NTLSGPLTPE LGNLKSLKSM DLSNNVLAGE
0301: IPEAFAELKN LTLLNLFRNK LHGAIPEFIG DLPELEVLQL WENNFTGSIP QGLGKNGKLQ LLDVSSNKLT GNLPPDMCSG NRLQTLITLG NFLFGPIPES
0401: LGRCESLSRI RMGENFLNGS IPKGLFDLPK LTQVELQDNY LTGEFPEIDS TPDSLGQISL SNNQLTGSLP PSVGNFSGLQ KLLLDGNKFS GRIPPEIGML
0501: QQLSKMDFSN NKFSGEITPE ISQCKVLTFV DLSRNELFGD IPTEITGMRI LNYLNLSRNH LIGSIPASLA SMQSLTSVDF SYNNLSGLVP GTGQFSYFNY
0601: TSFLGNPELC GPYLGACKDG VANGTHQPHV KGPLSASLKL LLVIGLLVCS IAFAVAAIIK ARSLKKASES RSWKLTAFQR LDFTCDDVLD SLKEDNIIGK
0701: GGAGIVYKGA MPNGELVAVK RLPAMSRGSS HDHGFNAEIQ TLGRIRHRHI VRLLGFCSNH ETNLLVYEYM PNGSLGEVLH GKKGGHLHWD TRYKIAVEAA
0801: KGLCYLHHDC SPLIVHRDVK SNNILLDSSF EAHVADFGLA KFLQDSGTSE CMSAIAGSYG YIAPEYAYTL KVDEKSDVYS FGVVLLELVS GRKPVGEFGD
0901: GVDIVQWVRK MTDSNKEGVL KILDTRLPTV PLHEVMHVFY VAMLCVEEQA VERPTMREVV QILTELPKPP SSKQGDSIVT ESSPPSCTLE SPTTTIKETK
1001: DHQQQPPQSP PPDLLSI

Best Arabidopsis Sequence Match ( AT5G65700.1 )
(BLAST)

0001: MKLFLLLLFL LHISHTFTAS RPISEFRALL SLKTSLTGAG DDKNSPLSSW KVSTSFCTWI GVTCDVSRRH VTSLDLSGLN LSGTLSPDVS HLRLLQNLSL
0101: AENLISGPIP PEISSLSGLR HLNLSNNVFN GSFPDEISSG LVNLRVLDVY NNNLTGDLPV SVTNLTQLRH LHLGGNYFAG KIPPSYGSWP VIEYLAVSGN
0201: ELVGKIPPEI GNLTTLRELY IGYYNAFEDG LPPEIGNLSE LVRFDGANCG LTGEIPPEIG KLQKLDTLFL QVNVFSGPLT WELGTLSSLK SMDLSNNMFT
0301: GEIPASFAEL KNLTLLNLFR NKLHGEIPEF IGDLPELEVL QLWENNFTGS IPQKLGENGK LNLVDLSSNK LTGTLPPNMC SGNKLETLIT LGNFLFGSIP
0401: DSLGKCESLT RIRMGENFLN GSIPKGLFGL PKLTQVELQD NYLSGELPVA GGVSVNLGQI SLSNNQLSGP LPPAIGNFTG VQKLLLDGNK FQGPIPSEVG
0501: KLQQLSKIDF SHNLFSGRIA PEISRCKLLT FVDLSRNELS GEIPNEITAM KILNYLNLSR NHLVGSIPGS ISSMQSLTSL DFSYNNLSGL VPGTGQFSYF
0601: NYTSFLGNPD LCGPYLGPCK DGVAKGGHQS HSKGPLSASM KLLLVLGLLV CSIAFAVVAI IKARSLKKAS ESRAWRLTAF QRLDFTCDDV LDSLKEDNII
0701: GKGGAGIVYK GVMPNGDLVA VKRLAAMSRG SSHDHGFNAE IQTLGRIRHR HIVRLLGFCS NHETNLLVYE YMPNGSLGEV LHGKKGGHLH WDTRYKIALE
0801: AAKGLCYLHH DCSPLIVHRD VKSNNILLDS NFEAHVADFG LAKFLQDSGT SECMSAIAGS YGYIAPEYAY TLKVDEKSDV YSFGVVLLEL VTGRKPVGEF
0901: GDGVDIVQWV RKMTDSNKDS VLKVLDPRLS SIPIHEVTHV FYVAMLCVEE QAVERPTMRE VVQILTEIPK LPPSKDQPMT ESAPESELSP KSGVQSPPDL
1001: LNL

Arabidopsis Description

BAM1Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Source:UniProtKB/Swiss-Prot;Acc:O49545]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.