Factsheet for VIT_05s0051g00540.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 3
plasma membrane 6
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g091400.2.1	Tomato	plasma membrane	74.32	75.24
KRH70959	Soybean	plastid	73.97	74.1
KRH75100	Soybean	plasma membrane, plastid	71.69	73.56
PGSC0003DMT400076247	Potato	cytosol	11.04	72.83
VIT_07s0005g05420.t01	Wine grape	plasma membrane	60.56	70.73
Bra014998.1-P	Field mustard	plasma membrane	68.8	69.29
PGSC0003DMT400076250	Potato	plasma membrane	74.58	69.19
CDX77472	Canola	plasma membrane	68.62	69.11
AT3G24240.1	Thale cress	plasma membrane	69.06	69.06
CDX85146	Canola	plasma membrane	66.78	69.02
GSMUA_Achr8P12880_001	Banana	plasma membrane	38.83	63.56
Os04t0132500-01	Rice	plasma membrane	60.39	60.07
GSMUA_Achr11P...	Banana	plasma membrane	37.86	59.67
Zm00001d025002_P001	Maize	plasma membrane	60.3	59.36
TraesCS2B01G005000.1	Wheat	plasma membrane	60.47	59.23
TraesCS2A01G012900.1	Wheat	plasma membrane	60.56	59.21
TraesCS2D01G013700.1	Wheat	plasma membrane	59.86	59.03
EES10396	Sorghum	plasma membrane	60.39	58.79
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	49.96	56.83
TraesCS4D01G005000.1	Wheat	plasma membrane	52.06	55.46
VIT_18s0001g15720.t01	Wine grape	plasma membrane	50.04	52.48
TraesCSU01G061100.1	Wheat	plastid	48.2	51.74
VIT_17s0000g08900.t01	Wine grape	plasma membrane	46.8	49.08
VIT_19s0015g01120.t01	Wine grape	plasma membrane	43.03	48.04
VIT_18s0001g02590.t01	Wine grape	plastid	38.74	47.17
TraesCS3D01G534900.1	Wheat	plasma membrane	39.88	45.0
VIT_01s0010g00330.t01	Wine grape	plasma membrane	32.6	37.65
VIT_05s0051g00460.t01	Wine grape	plasma membrane	36.28	37.47
VIT_19s0027g00010.t01	Wine grape	plasma membrane	36.11	37.08
VIT_00s1353g00010.t01	Wine grape	plasma membrane	32.6	36.58
VIT_12s0035g00990.t01	Wine grape	plasma membrane	31.11	36.37
VIT_18s0001g14610.t01	Wine grape	plasma membrane	30.94	36.02
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	31.9	35.07
VIT_04s0008g03240.t01	Wine grape	plasma membrane	28.4	33.51
VIT_09s0018g01900.t01	Wine grape	plasma membrane	27.96	31.62
VIT_01s0010g00380.t01	Wine grape	plasma membrane	33.92	30.86
VIT_11s0149g00090.t01	Wine grape	plasma membrane	25.5	29.94
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	27.34	29.43
VIT_07s0005g04390.t01	Wine grape	plasma membrane	29.62	23.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100266591	wikigene:100266591	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20
Gene3D:3.80.10.10	EMBL:AM435802	ProteinID:CAN73805	ProteinID:CAN73805.1	ProteinID:CCB57513	ProteinID:CCB57513.1
UniProt:F6HS54	EMBL:FN596241	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100266591	wikigene:LOC100266591	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF92	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000198341E	ArrayExpress:VIT_05s0051g00540	EnsemblPlantsGene:VIT_05s0051g00540	EnsemblPlants:VIT_05s0051g00540.t01	RefSeq:XP_002283104
RefSeq:XP_002283104.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:11311929..11315507

Molecular Weight (calculated)

123479.0 Da

IEP (calculated)

5.064

GRAVY (calculated)

0.031

Length

1141 amino acids

Sequence
(BLAST)

0001: MSMPSSRQPY NFSSFLVTPP PLFLSFFFLG LLTAPVFAVD NHEAFLLFSW LHSTPSPATS SLPDWNINDA TPCNWTSIVC SPRGFVTEIN IQSVHLELPI
0101: PSNLSSFQFL QKLVISDANI TGTIPPEIVG CTALRIIDLS SNSLVGTIPA SLGKLQKLED LVLNSNQLTG KIPVELSNCL NLRNLLLFDN RLGGNIPPDL
0201: GKLSNLEVIR AGGNKEITGK IPAELGECSN LTVLGLADTQ VSGSLPASLG KLSRLQTLSI YTTMLSGEIP PDIGNCSELV NLYLYENSLS GSVPPELGKL
0301: QKLQTLLLWQ NTLVGVIPEE IGNCSSLQMI DLSLNSLSGT IPPSLGDLSE LQEFMISNNN VSGSIPSVLS NARNLMQLQL DTNQISGLIP PELGKLSKLG
0401: VFFAWDNQLE GSIPSTLANC RNLQVLDLSH NSLTGTIPSG LFQLQNLTKL LLISNDISGT IPPEIGNCSS LVRMRLGNNR ITGGIPRQIG GLKNLNFLDL
0501: SRNRLSGSVP DEIESCTELQ MVDLSNNILE GPLPNSLSSL SGLQVLDVSV NRLTGQIPAS FGRLVSLNKL ILSRNSLSGS IPPSLGLCSS LQLLDLSSNE
0601: LFGSIPMELS QIEALEIALN LSCNGLTGPI PTQISALNKL SILDLSHNKL EGNLIPLAKL DNLVSLNISY NNFTGYLPDN KLFRQLPAID LAGNQGLCSW
0701: GRDSCFLNDV TGLTRNKDNV RQSRKLKLAI ALLITMTVAL VIMGTIAVIR ARTTIRGDDD SELGGDSWPW QFTPFQKLNF SVEQILRCLV DSNVIGKGCS
0801: GVVYRADMDN GEVIAVKKLW PTAMGAANGD NDKSGVRDSF SAEVKTLGSI RHKNIVRFLG CCWNRNTRLL MYDYMPNGSL GSLLHEKAGN SLEWGLRYQI
0901: LLGAAQGLAY LHHDCVPPIV HRDIKANNIL IGLEFEPYIA DFGLAKLVND ADFARSSNTV AGSYGYIAPE YGYMMKITEK SDVYSYGIVV LEVLTGKQPI
1001: DPTIPDGLHV VDWVRQKKGG VEVLDPSLLC RPESEVDEMM QALGIALLCV NSSPDERPTM KDVAAMLKEI KHEREDYAKV DVLLKGFPAT DIQDNKSSSG
1101: APATSSSTPT TQSLYPKSNN TSFSASSLLY SSSSNGKMGF N

Best Arabidopsis Sequence Match ( AT3G24240.1 )
(BLAST)

0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E

Arabidopsis Description

RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.