CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77472	Canola	plasma membrane	98.19	95.68
AT3G24240.1	Thale cress	plasma membrane	90.85	87.91
PGSC0003DMT400076247	Potato	cytosol	10.69	68.21
VIT_05s0051g00540.t01	Wine grape	plasma membrane	69.02	66.78
Solyc09g091400.2.1	Tomato	plasma membrane	66.67	65.31
KRH70959	Soybean	plastid	66.58	64.53
KRH75100	Soybean	plasma membrane, plastid	64.76	64.3
CDY19929	Canola	cytosol	46.29	61.2
CDY56672	Canola	cytosol	46.11	61.03
PGSC0003DMT400076250	Potato	plasma membrane	66.76	59.92
GSMUA_Achr8P12880_001	Banana	plasma membrane	34.42	54.52
TraesCS2D01G013700.1	Wheat	plasma membrane	56.79	54.19
Os04t0132500-01	Rice	plasma membrane	56.16	54.05
EES10396	Sorghum	plasma membrane	57.16	53.84
Zm00001d025002_P001	Maize	plasma membrane	56.52	53.84
TraesCS2B01G005000.1	Wheat	plasma membrane	56.79	53.82
TraesCS2A01G012900.1	Wheat	plasma membrane	56.7	53.64
GSMUA_Achr11P...	Banana	plasma membrane	34.33	52.35
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	47.37	52.14
TraesCS4D01G005000.1	Wheat	plasma membrane	49.46	50.98
TraesCSU01G061100.1	Wheat	plastid	46.29	48.07
CDX94319	Canola	cytosol	39.67	47.51
CDX89328	Canola	cytosol	39.49	47.29
CDY17379	Canola	plasma membrane	45.92	46.64
CDY28619	Canola	plasma membrane	44.93	46.53
CDY28391	Canola	plasma membrane	43.21	44.54
CDX73290	Canola	plasma membrane	43.84	44.08
TraesCS3D01G534900.1	Wheat	plasma membrane	39.86	43.52
CDX98665	Canola	cytosol, nucleus, plasma membrane	29.26	38.27
CDX93999	Canola	cytosol, nucleus, plasma membrane	29.17	38.15
CDY23037	Canola	plasma membrane	32.97	37.64
CDY54567	Canola	cytosol, plasma membrane, plastid	28.71	37.56
CDY02112	Canola	plasma membrane	32.7	37.25
CDY31445	Canola	cytosol, plasma membrane, plastid	28.26	36.97
CDY26259	Canola	plastid	36.05	36.89
CDY08759	Canola	plasma membrane	32.16	36.56
CDY45620	Canola	plasma membrane	32.16	36.49
CDY37749	Canola	plasma membrane	30.62	36.3
CDY62258	Canola	plasma membrane	28.53	36.17
CDY35204	Canola	plasma membrane	32.88	36.12
CDY38373	Canola	plasma membrane	31.43	36.07
CDY48481	Canola	plasma membrane	36.14	36.01
CDY23764	Canola	plasma membrane	34.6	35.87
CDY66353	Canola	plasma membrane	27.63	35.51
CDY02141	Canola	plasma membrane	28.44	35.24
CDY23065	Canola	plasma membrane	32.34	35.14
CDY31136	Canola	plasma membrane	32.43	35.1
CDX97498	Canola	plasma membrane	32.43	35.06
CDY37560	Canola	plasma membrane	29.62	33.61
CDY68314	Canola	plasma membrane	27.63	33.55
CDX89518	Canola	cytosol	0.36	33.33
CDX87661	Canola	plasma membrane	28.71	32.85
CDX73202	Canola	plasma membrane	29.35	32.83
CDY65166	Canola	plasma membrane	30.53	32.81
CDX73169	Canola	plasma membrane	26.36	32.51
CDY11130	Canola	plasma membrane	30.43	32.5
CDX68246	Canola	plasma membrane	31.88	31.91
CDY14942	Canola	plasma membrane	34.87	30.97
CDY59496	Canola	plasma membrane	28.44	30.78
CDX96976	Canola	plasma membrane	34.6	30.73
CDY06535	Canola	plasma membrane	42.39	29.71
CDX72170	Canola	plasma membrane	22.74	28.2
CDY27242	Canola	plasma membrane	22.74	28.01

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078D769
EnsemblPlants:CDX85146	ProteinID:CDX85146	ProteinID:CDX85146.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00142710001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF92	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEF84E	SEG:seg

Description

BnaC07g07600D

Coordinates

chrLK031840:-:1374886..1378463

Molecular Weight (calculated)

119827.0 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.061

Length

1104 amino acids

Sequence
(BLAST)

0001: MSSPHTLISS SSSSFFIFIL CFSLSNAEQN PEASILYSWL HSSSLPPSSL SLFNWNSADN TPCNNNWTFV TCSPQGFVTD IDIQAVQVEL PLPKNLPELR
0101: SLQKLTISGA NVTGTIPESL GDCLALTVLD LSSNSLVGDI PWSLSKLRNL ETLILNSNQL TGRIPPEISK CSKLKSLILF DNLLTGGIPS ELGKLSGLEE
0201: IRIGGNKELS GKIPPEIGDC SNLTVLGLAE TSVSGNLPSS LGNLKKLQTL SIYTTMISGE IPPELGNCSE LVEIFLYENS LSGSIPREIA KLAKLEQLFL
0301: WQNSLVGGIP EDIGNCSNLK MIDLSLNLLS GSIPVSIGRL SFLEEFMISD NNFSGSIPTT ISNCSSLVQL QLDKNKISGL IPTELGTLTK LTLFFAWSNQ
0401: LEGSIPPGLA DCTDLQALDL SRNALTGTIP SEIGNCSSLV RLRLGFNRIT GEIPTGIGSL KKLNFLDLSS NRLHGKVPDE IGSCSELQMI DLSNNSLQGS
0501: LPNAASSLSG LQVLDVSANQ LSGKIPASLG RLASLNKLIL GKNLFSGSIP GSLGMCSGLQ LLDLGSNELS GEIPSELGDI ENLEIALNLS SNRLSGKIPS
0601: KFASLNKLSI LDISHNMLEG DLAPLANIEN LVSLNISYNS FSGYLPDNKL FRQLPPQDLE GNKKLCSTST KDSCFLAYGN SNGLADDKET SRARNLRLAL
0701: ALLISLTVVL MILGAVAVIR ARRNNENERD SELGESYKWQ FTPFQKLNFS VDQIIRCLVE PNVIGKGCSG VVYRADVDNG DVIAVKKLWP AMKPDKNVRD
0801: SFSAEVKTLG TIRHKNIVRF LGCCWNRNTR LLMYDYMPNG SLGSLLHERR GSALDWDLRY RILLGAAQGL AYLHHDCLPP IVHRDIKANN ILIGLDFEPY
0901: IADFGLAKLV DEGDIGRCSN TVAGSYGYIA PEYGYSMKIT EKSDVYSYGV VVLEVLTGKQ PIDPTVPEGL HLVDWVRQNR GSLEVLDSSL RSRTEAEADE
1001: MMQVLGTALL CVNASPDERP TMKDVAAMLK EIKQEREEYA KVDLLLKKSP PPTAKTQEEG SKNEMTVATA SSSKEMRREE RIVKSNNTGF SASSLLYSPS
1101: SSIE

Best Arabidopsis Sequence Match ( AT3G24240.1 )
(BLAST)

0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E

Arabidopsis Description

RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.