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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 5
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034446.1-P Field mustard plasma membrane 100.0 97.81
CDX73290 Canola plasma membrane 96.17 93.81
AT1G34110.1 Thale cress extracellular, plasma membrane 87.02 86.94
VIT_18s0001g02590.t01 Wine grape plastid 63.87 73.0
PGSC0003DMT400064535 Potato plasma membrane 73.58 72.43
KRH35050 Soybean plasma membrane 73.02 72.34
KRG91721 Soybean plasma membrane 72.64 72.1
Solyc12g056730.1.1 Tomato plasma membrane, vacuole 70.4 70.01
PGSC0003DMT400059664 Potato plasma membrane 70.4 69.94
GSMUA_Achr2P15820_001 Banana plasma membrane 54.25 67.01
TraesCS7B01G260400.1 Wheat plasma membrane 64.8 64.92
Os06t0589800-01 Rice extracellular 64.61 64.55
TraesCS7D01G354700.1 Wheat plasma membrane 64.33 64.45
TraesCS7A01G368200.1 Wheat plasma membrane 64.33 64.45
EER89985 Sorghum plasma membrane 64.52 64.22
Zm00001d046485_P001 Maize plasma membrane 64.43 63.95
HORVU7Hr1G085600.1 Barley plasma membrane 63.68 63.38
GSMUA_Achr10P... Banana plastid 42.86 61.2
CDY19929 Canola cytosol 35.01 44.91
CDY56672 Canola cytosol 34.83 44.72
CDX89328 Canola cytosol 38.0 44.14
CDX94319 Canola cytosol 37.82 43.93
CDY28619 Canola plasma membrane 43.6 43.81
CDY17379 Canola plasma membrane 43.98 43.33
CDX85146 Canola plasma membrane 44.54 43.21
CDX77472 Canola plasma membrane 45.28 42.81
CDX98665 Canola cytosol, nucleus, plasma membrane 32.87 41.71
CDX93999 Canola cytosol, nucleus, plasma membrane 32.87 41.71
CDX89518 Canola cytosol 0.47 41.67
CDY54567 Canola cytosol, plasma membrane, plastid 32.31 41.0
CDY31445 Canola cytosol, plasma membrane, plastid 31.65 40.17
CDY45620 Canola plasma membrane 35.57 39.16
CDY08759 Canola plasma membrane 35.39 39.03
CDY02112 Canola plasma membrane 35.11 38.8
CDY23037 Canola plasma membrane 34.73 38.47
CDY62258 Canola plasma membrane 30.72 37.77
CDY02141 Canola plasma membrane 31.28 37.6
CDY66353 Canola plasma membrane 30.07 37.49
CDX87661 Canola plasma membrane 33.71 37.41
CDY26259 Canola plastid 37.63 37.35
CDY48481 Canola plasma membrane 38.38 37.09
CDX73202 Canola plasma membrane 34.08 36.98
CDY37749 Canola plasma membrane 31.75 36.52
CDY23764 Canola plasma membrane 36.04 36.24
CDY23065 Canola plasma membrane 34.27 36.12
CDY35204 Canola plasma membrane 33.89 36.12
CDY37560 Canola plasma membrane 32.77 36.07
CDY68314 Canola plasma membrane 30.53 35.97
CDY38373 Canola plasma membrane 32.03 35.65
CDX97498 Canola plasma membrane 33.24 34.87
CDY31136 Canola plasma membrane 33.05 34.71
CDY65166 Canola plasma membrane 32.03 33.4
CDX73169 Canola plasma membrane 27.82 33.3
CDY14942 Canola plasma membrane 38.28 32.98
CDX96976 Canola plasma membrane 38.1 32.82
CDX68246 Canola plasma membrane 33.71 32.73
CDY59496 Canola plasma membrane 31.09 32.65
CDY11130 Canola plasma membrane 31.19 32.3
CDX72170 Canola plasma membrane 25.4 30.56
CDY27242 Canola plasma membrane 25.12 30.02
CDY06535 Canola plasma membrane 42.3 28.76
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.1.8.2MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078GS84
UniProt:A0A078GS84EnsemblPlants:CDY28391ProteinID:CDY28391ProteinID:CDY28391.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00040218001InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF00560
PFAM:PF08263PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF33InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EF02E9
SEG:seg:::::
Description
BnaA05g18490DBnaA05g18490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS84]
Coordinates
chrLK032219:-:83697..87221
Molecular Weight (calculated)
116895.0 Da
IEP (calculated)
7.613
GRAVY (calculated)
0.056
Length
1071 amino acids
Sequence
(BLAST)
0001: MEKEPNHFTR LFPFNHFYII KRPSFDCCIK QSNLLFLILF LFGSWVSMAQ PTLSLSSDGQ ALLSLKRQSL SSSSSILSSW DPQDKTPCSW YGITCSADNR
0101: VISFLNLSST NLSGLIPPSF GKLTHLRLLD LSSNALSGPV PSELGRLSSL QFLILNANKL SGSIPSQISN LFSLQVLCLQ DNLLNGSIPS SLGSLVSLQE
0201: FRLGGNPNLG GPIPAQIGLL KNLTTLGLAA SGLTGSIPST FGNLVNLQTL ALYDTDVSGT IPPQLGLCSE LRNLYLHMNK LTGSIPKELG KLQKITSLLL
0301: WGNSLSGAIP PEISNSSSLV VFDVSANDLS GEIPGDLGKL VWLEQLQLSD NMFTGHIPWE ISNCSSLIAL QLDKNKLSGS IPSQIGNLKS LESFFLWENS
0401: VSGTIPSSFG NCTDLVALDL SRNKLTGRIP EELFSLKRLS KLLLLGNSLS GGLPKSVAKC QSLVRLRLGE NQLSGQVPKE IGELQNLVFL DLYMNHFSGG
0501: LPYEISNITV LELLDVHNNY ITGDIPAQLG NLVNLEQLDL SRNSFTGYIP LSFGNFSYLN KLILNNNLLT GQIPKSIKNL QKLTLLDLSF NSLSGEIPLE
0601: LGRVTTLTIN LDLSYNAFTG DIPGTFSGLT QLQSLDLSHN MLNGDIKVLG SLTSLASLNI SFNNFSGPFP ATPFFKTISA TSYLQNKNLC HTIDGITCSS
0701: RTGRSKSPKM VALVTVILAS TTIALLAAWL LVLRNNHRYK TQKQTTTTTT SSTAEDLSYP WTFIPFQKLG ISVNNIVSSL TDENVIGKGC SGVVYRAEMP
0801: NGETIAVKKL WRTKDNDDEP TTKMEIQILG SIRHRNIVKL LGYCSNKSVK LLLYNYFPNG NLQQLLQGNR SLDWETRYKI AIGTAQGLAY LHHDCLPAIL
0901: HRDVKCNNIL LDSKFEAILA DFGLAKVMNH TAMSQVAGSY GYIAPEYGYT MNITEKSDVY SYGVVLLEIL SGRSAVEPQI GDGLHIVEWV KKKMGSFEPA
1001: LSVLDVKLQG LPDQIVQEML QTLGVAMFCV NSSPVERPTM KEVVALLTEV KCSPEEWGKT SQPLIKPSSS L
Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)
0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.