Factsheet for PGSC0003DMT400064535

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g02590.t01	Wine grape	plastid	72.06	83.67
PGSC0003DMT400059664	Potato	plasma membrane	82.72	83.49
KRH35050	Soybean	plasma membrane	80.24	80.76
KRG91721	Soybean	plasma membrane	79.96	80.63
AT1G34110.1	Thale cress	extracellular, plasma membrane	74.54	75.65
Bra034446.1-P	Field mustard	plasma membrane	74.08	73.61
CDY28391	Canola	plasma membrane	72.43	73.58
CDX73290	Canola	plasma membrane	74.08	73.41
GSMUA_Achr2P15820_001	Banana	plasma membrane	58.36	73.24
TraesCS7B01G260400.1	Wheat	plasma membrane	68.29	69.5
TraesCS7D01G354700.1	Wheat	plasma membrane	68.11	69.32
TraesCS7A01G368200.1	Wheat	plasma membrane	68.01	69.22
Os06t0589800-01	Rice	extracellular	68.2	69.22
EER89985	Sorghum	plasma membrane	68.38	69.14
Zm00001d046485_P001	Maize	plasma membrane	67.74	68.3
HORVU7Hr1G085600.1	Barley	plasma membrane	66.45	67.19
GSMUA_Achr10P...	Banana	plastid	44.94	65.2
PGSC0003DMT400063787	Potato	plasma membrane, plastid	44.21	45.68
PGSC0003DMT400040886	Potato	plasma membrane	46.23	44.55
PGSC0003DMT400057334	Potato	plasma membrane	42.19	42.38
PGSC0003DMT400046807	Potato	plasma membrane	42.19	41.46
PGSC0003DMT400076250	Potato	plasma membrane	46.05	40.73
PGSC0003DMT400016060	Potato	plasma membrane	33.73	38.23
PGSC0003DMT400043459	Potato	plasma membrane	38.42	38.1
PGSC0003DMT400064038	Potato	plasma membrane	34.83	37.94
PGSC0003DMT400078706	Potato	plasma membrane	35.39	37.86
PGSC0003DMT400043020	Potato	plasma membrane	35.48	37.77
PGSC0003DMT400025747	Potato	plasma membrane	34.01	37.68
PGSC0003DMT400079864	Potato	plasma membrane	38.33	37.6
PGSC0003DMT400030278	Potato	plasma membrane	38.05	37.36
PGSC0003DMT400018675	Potato	plasma membrane	34.28	36.64
PGSC0003DMT400010618	Potato	plasma membrane	33.64	36.17
PGSC0003DMT400048524	Potato	plasma membrane	32.72	35.07
PGSC0003DMT400022119	Potato	plasma membrane	33.09	35.02
PGSC0003DMT400023681	Potato	plasma membrane	34.19	33.7
PGSC0003DMT400076247	Potato	cytosol	5.15	32.37
PGSC0003DMT400008336	Potato	plasma membrane	32.9	32.11
PGSC0003DMT400008335	Potato	plasma membrane	33.0	31.85
PGSC0003DMT400059346	Potato	plasma membrane	36.4	31.55
PGSC0003DMT400030886	Potato	plasma membrane	27.76	31.49

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590576	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CCI8	PFAM:PF00069
PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400025076	PGSC:PGSC0003DMG400025076	EnsemblPlants:PGSC0003DMT400064535	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF33
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI00029603C3	RefSeq:XP_006359059.1	SEG:seg	:

Description

Leucine-rich repeat receptor protein kinase EXS [Source:PGSC_GENE;Acc:PGSC0003DMG400025076]

Coordinates

chr4:+:61438028..61442579

Molecular Weight (calculated)

118930.0 Da

IEP (calculated)

6.384

GRAVY (calculated)

0.108

Length

1088 amino acids

Sequence
(BLAST)

0001: MEKKSYHFYT FPSCYFLFLL ISWLSLSPKI VFLVSSVSSD GQALLSLLKA AEPYTKSSSS VLSSWNPSSL TPCSWQGITC SPQERVISLS IPNTFLNLSY
0101: LPSELSSLSS LQLLNLSSTN ISGTIPPSFG SFSHLRLLDL SSNSLLGSIP SELGRLSSLQ FLFLNSNRLT GKIPPELANL SSLEIFCLQD NLLNGSIPSQ
0201: LGSLVSLQQF RIGGNPYLSG EIPAQLGLLT NLTMFGVAAT GLSGVIPPTF GNLINLQTLA IYDTEVFGSI PPELGMISEL RYLYLHMNKL TGSIPPQLGK
0301: LQKLTSLLLW GNSLTGPIPA EVSNCSSLVI LDVSANELSG EIPGDLGKLL VLEQLHLSDN ALTGSIPWQL SNCTSLTALQ LDKNQLSGQI PWQVGKLKYL
0401: QSFFLWGNSV SGTIPAAFGN CTELYALDLS RNKLTGSIPE EIFDLKQLSK LLLLGNSLTG RLPRSVARCQ SLVRLRLGEN QLSGQIPKEI GQLQNLVFLD
0501: LYMNHFSGGL PSEIANITVL ELLDVHNNYL TGEIPHQMGE LVNLEQLDLS RNSFTGEIPL SFGNLSYLNK FILSNNLLTG SIPKSFKNLQ KLTLLDLSSN
0601: SLSGEIPSEL GYVTSLTIGL DLSLNRFTGE LPETLSGLSQ LQSLDISHNL LSGRITILSS LTSLTSLNVS DNNFSGPIPV TPFFRTLTSD SFLENSLCQS
0701: VDGYSCSSHI MGRNGLKSPK TIALVAVILT SVAIAVVATW ILVTRNHRYV FQKSQGMSAS SVGAEDFSYP WTFIPFQKFN FTIDNILDCL KDENIIGKGC
0801: SGVVYKAEMP NGEVIAVKKL WKTKKDEEPV DSFAAEIQIL GHIRHRNILK LLGYCSNKSV KLLLYNYISN GNLHQLLQSN RNLDWEIRYK IAIGSAQGLA
0901: YLHHDCVPAI LHRDVKCNNI LIDSKFDAYI ADFGLAKLMN SPNYHHAMSS VAGSYGYIAP EYGYTANITE KSDVYSYGVV LLEILSGRSA VDSQIGDGLH
1001: IVEWVKKKMG SFEPAVTVLD TKLQGLPDQV VQEMLQTLGI AMFCVNSSPV ERPTMKEVVA LLMEVKCSPD QEFGKTSQPL IKQSSTQS

Best Arabidopsis Sequence Match ( AT1G34110.1 )
(BLAST)

0001: MERERSNFFF LFLFCSWVSM AQPTLSLSSD GQALLSLKRP SPSLFSSWDP QDQTPCSWYG ITCSADNRVI SVSIPDTFLN LSSIPDLSSL SSLQFLNLSS
0101: TNLSGPIPPS FGKLTHLRLL DLSSNSLSGP IPSELGRLST LQFLILNANK LSGSIPSQIS NLFALQVLCL QDNLLNGSIP SSFGSLVSLQ QFRLGGNTNL
0201: GGPIPAQLGF LKNLTTLGFA ASGLSGSIPS TFGNLVNLQT LALYDTEISG TIPPQLGLCS ELRNLYLHMN KLTGSIPKEL GKLQKITSLL LWGNSLSGVI
0301: PPEISNCSSL VVFDVSANDL TGDIPGDLGK LVWLEQLQLS DNMFTGQIPW ELSNCSSLIA LQLDKNKLSG SIPSQIGNLK SLQSFFLWEN SISGTIPSSF
0401: GNCTDLVALD LSRNKLTGRI PEELFSLKRL SKLLLLGNSL SGGLPKSVAK CQSLVRLRVG ENQLSGQIPK EIGELQNLVF LDLYMNHFSG GLPYEISNIT
0501: VLELLDVHNN YITGDIPAQL GNLVNLEQLD LSRNSFTGNI PLSFGNLSYL NKLILNNNLL TGQIPKSIKN LQKLTLLDLS YNSLSGEIPQ ELGQVTSLTI
0601: NLDLSYNTFT GNIPETFSDL TQLQSLDLSS NSLHGDIKVL GSLTSLASLN ISCNNFSGPI PSTPFFKTIS TTSYLQNTNL CHSLDGITCS SHTGQNNGVK
0701: SPKIVALTAV ILASITIAIL AAWLLILRNN HLYKTSQNSS SSPSTAEDFS YPWTFIPFQK LGITVNNIVT SLTDENVIGK GCSGIVYKAE IPNGDIVAVK
0801: KLWKTKDNNE EGESTIDSFA AEIQILGNIR HRNIVKLLGY CSNKSVKLLL YNYFPNGNLQ QLLQGNRNLD WETRYKIAIG AAQGLAYLHH DCVPAILHRD
0901: VKCNNILLDS KYEAILADFG LAKLMMNSPN YHNAMSRVAG SYGYIAPEYG YTMNITEKSD VYSYGVVLLE ILSGRSAVEP QIGDGLHIVE WVKKKMGTFE
1001: PALSVLDVKL QGLPDQIVQE MLQTLGIAMF CVNPSPVERP TMKEVVTLLM EVKCSPEEWG KTSQPLIKPS SS

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Source:UniProtKB/Swiss-Prot;Acc:C0LGF5]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.