Factsheet for PGSC0003DMT400059346

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0010g00380.t01	Wine grape	plasma membrane	65.9	65.95
KRH58543	Soybean	plasma membrane	66.77	65.93
Bra013446.1-P	Field mustard	mitochondrion	56.1	65.06
AT4G20140.1	Thale cress	plasma membrane	63.51	63.81
KRH12156	Soybean	plasma membrane	63.03	62.93
KRH37162	Soybean	plasma membrane	62.47	62.37
Bra039525.1-P	Field mustard	plasma membrane	60.56	61.14
CDY14942	Canola	plasma membrane	60.16	60.74
CDX96976	Canola	plasma membrane	59.84	60.42
Bra025113.1-P	Field mustard	plasma membrane	58.41	59.11
EER97238	Sorghum	plasma membrane	53.63	53.54
Zm00001d021535_P001	Maize	mitochondrion, plasma membrane	53.31	53.1
TraesCS2D01G233800.1	Wheat	plasma membrane	53.23	52.81
TraesCS2B01G251700.1	Wheat	plasma membrane	52.91	52.49
PGSC0003DMT400043459	Potato	plasma membrane	32.75	37.47
PGSC0003DMT400030278	Potato	plasma membrane	32.59	36.91
PGSC0003DMT400079864	Potato	plasma membrane	32.19	36.43
PGSC0003DMT400064535	Potato	plasma membrane	31.55	36.4
PGSC0003DMT400025747	Potato	plasma membrane	28.29	36.15
PGSC0003DMT400059664	Potato	plasma membrane	30.68	35.71
PGSC0003DMT400063787	Potato	plasma membrane, plastid	29.24	34.85
PGSC0003DMT400016060	Potato	plasma membrane	26.61	34.79
PGSC0003DMT400046807	Potato	plasma membrane	30.6	34.69
PGSC0003DMT400078706	Potato	plasma membrane	28.05	34.61
PGSC0003DMT400043020	Potato	plasma membrane	28.05	34.44
PGSC0003DMT400064038	Potato	plasma membrane	27.33	34.33
PGSC0003DMT400010618	Potato	plasma membrane	27.33	33.89
PGSC0003DMT400057334	Potato	plasma membrane	29.24	33.89
PGSC0003DMT400008336	Potato	plasma membrane	29.88	33.63
PGSC0003DMT400018675	Potato	plasma membrane	27.25	33.6
PGSC0003DMT400040886	Potato	plasma membrane	29.88	33.22
PGSC0003DMT400023681	Potato	plasma membrane	29.0	32.97
PGSC0003DMT400008335	Potato	plasma membrane	29.56	32.92
PGSC0003DMT400022119	Potato	plasma membrane	26.53	32.39
PGSC0003DMT400048524	Potato	plasma membrane	25.98	32.12
PGSC0003DMT400076250	Potato	plasma membrane	30.28	30.89
PGSC0003DMT400030886	Potato	plasma membrane	22.95	30.03
PGSC0003DMT400076247	Potato	cytosol	3.03	21.97

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590832	MapMan:11.10.1.4.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0006833	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009611	GO:GO:0009653	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0030104	GO:GO:0030154	GO:GO:0030312
GO:GO:0035987	GO:GO:0042659	GO:GO:0045184	GO:GO:0048226	GO:GO:0051302	GO:GO:0055075
GO:GO:0090558	GO:GO:0090708	GO:GO:1903224	GO:GO:2000067	GO:GO:2000280	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1C450	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400023057	PGSC:PGSC0003DMG400023057	EnsemblPlants:PGSC0003DMT400059346	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF426	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0002954971	RefSeq:XP_006363236.1	SEG:seg	:	:	:

Description

Leucine Rich Repeat family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400023057]

Coordinates

chr5:+:5564035..5567888

Molecular Weight (calculated)

138091.0 Da

IEP (calculated)

4.885

GRAVY (calculated)

-0.082

Length

1255 amino acids

Sequence
(BLAST)

0001: MSMFNKLLLV WFFVVTLVLG YVFSETELEV LLEIKKSFLD DPENVLSNWS DKNQNFCQWS GVSCEEDTLK VVRLNLSDCS ISGSISPSFG FLHDLLHLDL
0101: SSNLLSGPIP PTLSNLSSLQ SLLLYSNQLT GPIPNEIGLL KNLQVLRIGD NVGLTGLIPS SIGDLENLVT LGLASCSLSG MIPPELGKLG RVENMNLQEN
0201: NLENGIPAEI GNCSSLVAFS VAVNNLNGSI PEELSMLKNL QVMNLANNSL SGQIPTQLGE MNELQYLNLL GNQLEGSIPK SLAKLSNVRN LDLSGNRLTG
0301: EIPGEFGNMD QLQFLVLTSN NLSGSIPKTI CSSNRNSSLE HMMLSENQLS GEIPVELKEC ISLKQLDLSN NTLNGSIPVE LYELVELTDL LLNNNTLVGS
0401: VSPLIANLTN LQTLALSHNN FHGNIPKEIG MVENLEILFL YENQFSGEIP MEIGNCSRLQ MIDFYGNAFS GRIPITIGGL KELNFIDFRQ NDLSGEIPAS
0501: LGNCHQLKIL DLADNRLSGS VPATFGYLRA LEQLMLYNNS LEGNLPDELI NLSNLTRINF SHNKLNGSIV SLCSSTSFLS FDVTNNAFDH EVPPHLGYSP
0601: FLERLRLGNN RFTGEIPWTL GLIRELSLLD LSGNELIGLI PPQLSLCRKL THLDLNNNRL YGSIPSWLGN LPLLGELKLS SNKFSGPLPR ELFNCSKLLV
0701: LSLEENSLNG TLPLEIGELK SLNILNFNKN QLSGPIPSTI GNLSKLYILR LSGNNLTGEI PSELGELKNL QSILDLSFNN IIGQIPPSVG TLTKLETLDL
0801: SHNHLTGEVP PQVGEMSSLG KLNLSYNNLQ GKLDKQYAHW PADAFTGNPH LCGSPLQNCE VSKSNNRGSG LSNSTVVIIS VISTTVAIIL MLLGAALFFK
0901: QRREAFRRGS EVNSAYSSSS SQGQKRPLFA SVAAKRDIRW DDIMEATNNL SNDFIIGSGG SGTVYKAELF NGEIVAIKRI PSKDDLLLDK SFAREIKTLW
1001: RIRHRHLVRL LGYCNNSGEG SNVLIYEYME NGSVWDWLHK QPANNNKRKT CLDWEARLKI AVGLAQGVEY LHHDCVPKII HRDIKSSNIL LDSNMEAHLG
1101: DFGLAKAVHD NYNSYNTESN LWLAGSFGYI APEYAYSSKA TEKSDVYSMG IVLMELVSGR MPTDGSFGED MDMVRWVESC IEMSGTVREE LIDPVLKPLL
1201: PNEESAALQV LEIALECTKT APAERPSSRK VCDLLLHAFN DKVVHSDKMS PDNYV

Best Arabidopsis Sequence Match ( AT4G20140.1 )
(BLAST)

0001: MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL

Arabidopsis Description

GSO1LRR receptor-like serine/threonine-protein kinase GSO1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGQ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.