Factsheet for PGSC0003DMT400063787

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
plastid 3
plasma membrane 3
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064940.2.1	Tomato	plasma membrane	96.87	93.75
VIT_18s0001g15720.t01	Wine grape	plasma membrane	72.74	70.4
KRH18124	Soybean	vacuole	67.14	64.98
KRH15990	Soybean	extracellular, plasma membrane, vacuole	66.86	64.77
KRH64523	Soybean	plasma membrane	66.76	64.55
KRH53418	Soybean	plasma membrane	66.57	64.37
GSMUA_Achr7P23450_001	Banana	plasma membrane, vacuole	38.94	54.52
PGSC0003DMT400040886	Potato	plasma membrane	51.57	48.1
PGSC0003DMT400057334	Potato	plasma membrane	46.82	45.52
PGSC0003DMT400076250	Potato	plasma membrane	52.14	44.63
PGSC0003DMT400059664	Potato	plasma membrane	45.39	44.34
PGSC0003DMT400064535	Potato	plasma membrane	45.68	44.21
PGSC0003DMT400046807	Potato	plasma membrane	46.15	43.9
PGSC0003DMT400076247	Potato	cytosol	6.65	40.46
PGSC0003DMT400043459	Potato	plasma membrane	38.46	36.92
PGSC0003DMT400030278	Potato	plasma membrane	38.08	36.19
PGSC0003DMT400078706	Potato	plasma membrane	34.85	36.09
PGSC0003DMT400016060	Potato	plasma membrane	32.86	36.04
PGSC0003DMT400025747	Potato	plasma membrane	33.43	35.85
PGSC0003DMT400010618	Potato	plasma membrane	34.28	35.67
PGSC0003DMT400048524	Potato	plasma membrane	34.38	35.66
PGSC0003DMT400018675	Potato	plasma membrane	34.38	35.56
PGSC0003DMT400043020	Potato	plasma membrane	34.38	35.42
PGSC0003DMT400022119	Potato	plasma membrane	34.19	35.02
PGSC0003DMT400079864	Potato	plasma membrane	36.85	34.99
PGSC0003DMT400064038	Potato	plasma membrane	32.19	33.93
PGSC0003DMT400023681	Potato	plasma membrane	32.57	31.07
PGSC0003DMT400008336	Potato	plasma membrane	32.76	30.94
PGSC0003DMT400008335	Potato	plasma membrane	32.19	30.08
PGSC0003DMT400030886	Potato	plasma membrane	27.35	30.03
PGSC0003DMT400059346	Potato	plasma membrane	34.85	29.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CB88	PFAM:PF00069	PFAM:PF00560	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400024795
PGSC:PGSC0003DMG400024795	EnsemblPlants:PGSC0003DMT400063787	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF302	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295EFC7
SEG:seg	:	:	:	:	:

Description

Brassinosteroid LRR receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400024795]

Coordinates

chr4:-:58667216..58671145

Molecular Weight (calculated)

115567.0 Da

IEP (calculated)

5.318

GRAVY (calculated)

0.006

Length

1053 amino acids

Sequence
(BLAST)

0001: MSWLSTFNSS ASVAPFSSWN PSHENPCKWD YIQCTSNGFV SDIKIRSINL PAIFPSQVLS FHFLEVLVLS NCNLTGEIPA FIGNLSSSLR ILDLSFNALT
0101: GSIPPEIGRL SQLKQLLLSS NFFEGQIPKE IGRCSELQQL ELFDNQFSGK IPEEIGQLTS LEIFRAGGNV GIQGEIPMQI SSCKELVILG LADTGVTGQI
0201: PHSIGELKKL QTLAVYTANL TGEIPPEIGN CTSLEELFVY ENQITGEIPS ELGLLKNLKK VLLWKNNLTG EIPGNLGNCS SLKVIDFSVN YLYGEIPPSF
0301: ENLGTLEELL LSENSISGEI PYYIGNFSSL KQLELDNNNI SGVIPPTIGK LKELNLFFAW QNQLHGSIPT ELADCRKLQS LDLSHNFLTG SIPNTLFNLR
0401: NLTKLLLISN VLSGGIPPDI GNCTSLSRLR LGSNRLDGPI PPEIGRLPSL SYLELSENQF TGSIPPAIGN CPQLEMVDLH GNNLQGTVPS SFVSLTGLNI
0501: LDLSMNRISG NIPEDIGKLI LLNKLILNGN NIDGTVPKSL ELCQDLQLLD LSSNRLVGLI PEEIGNLQGL DILFNVSRNF LTGQIPESFS NLSKLANMDI
0601: SHNMLTGSLR VLSNLDNLVS LNVSYNNFSG VLPNTKFFQS LPPSAFIGNQ ELCTDRAACH LSGDHHGLKS IKKITIAIVL SIFMTMLIVT ASIAIFIRTQ
0701: GEICQKDDEE NGLQWEFTPF RKLSFSVTDV VPRLSESNIV GKGCSSFVYR VETPSGQVIA VKKLLAKKIG EVPQRDFFSA EVRTLGSIRH KNIVRLLGCC
0801: NNGKTRLLLF DYISNGSLSG LLHEKRVFLD WDARFNIILG AAQGLAYLHH DCSPPIVHRD IKTNNILVGP QFEAFLADFG LAKLLNTSSD TSRASTIIAG
0901: SYGYIAPEYG YSLRITEKSD VYSYGIVLLE VLTGMEPTDS RIPEGSHIVT WVNQELRVKH KEFTTILDQQ LLLRSGTQTQ EMLQVLGVAL LCVNPCANER
1001: PTMKDVAAML MEIRHENEDL EKPNRGVVPN PKEAISCPSF SGSSQPLNRS PPQ

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.