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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400025747

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G75820.1 PGSC0003DMT400025747 AT1G75820.1 9294234
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g081590.2.1 Tomato plasma membrane 97.15 96.75
VIT_18s0001g14610.t01 Wine grape plasma membrane 67.52 67.65
Bra015812.1-P Field mustard cytosol 51.83 66.97
CDX73202 Canola plasma membrane 63.14 62.82
AT1G75820.1 Thale cress plasma membrane 62.53 62.65
CDX87661 Canola plasma membrane 61.41 62.49
KRH29397 Soybean plasma membrane 60.29 60.35
KRH24413 Soybean plasma membrane 60.49 60.18
GSMUA_Achr9P24170_001 Banana plasma membrane 48.37 58.28
TraesCS7A01G533800.1 Wheat cytosol, plasma membrane, plastid 42.46 55.09
KRH29398 Soybean cytosol 35.13 54.59
Os06t0717200-01 Rice plasma membrane 54.38 53.72
KXG20897 Sorghum plasma membrane 54.07 53.1
Zm00001d014793_P001 Maize plasma membrane 53.56 52.81
GSMUA_Achr3P26680_001 Banana extracellular, plasma membrane 32.18 51.72
PGSC0003DMT400043020 Potato plasma membrane 52.75 50.68
PGSC0003DMT400078706 Potato plasma membrane 51.53 49.75
HORVU0Hr1G022670.2 Barley mitochondrion 53.67 49.25
PGSC0003DMT400064038 Potato plasma membrane 49.39 48.55
PGSC0003DMT400016060 Potato plasma membrane 45.62 46.67
TraesCS7D01G521200.1 Wheat plasma membrane 51.63 45.84
HORVU5Hr1G085130.1 Barley endoplasmic reticulum, plasma membrane 19.65 43.18
TraesCSU01G171600.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 19.45 42.44
PGSC0003DMT400010618 Potato plasma membrane 40.12 38.93
PGSC0003DMT400022119 Potato plasma membrane 40.53 38.72
PGSC0003DMT400018675 Potato plasma membrane 40.12 38.7
PGSC0003DMT400048524 Potato plasma membrane 39.31 38.03
PGSC0003DMT400030278 Potato plasma membrane 39.21 34.75
PGSC0003DMT400079864 Potato plasma membrane 38.8 34.36
PGSC0003DMT400064535 Potato plasma membrane 37.68 34.01
PGSC0003DMT400043459 Potato plasma membrane 37.78 33.82
PGSC0003DMT400059664 Potato plasma membrane 36.97 33.67
PGSC0003DMT400063787 Potato plasma membrane, plastid 35.85 33.43
PGSC0003DMT400030886 Potato plasma membrane 31.47 32.22
PGSC0003DMT400040886 Potato plasma membrane 36.56 31.8
PGSC0003DMT400046807 Potato plasma membrane 35.74 31.71
PGSC0003DMT400057334 Potato plasma membrane 34.93 31.67
PGSC0003DMT400023681 Potato plasma membrane 34.11 30.34
PGSC0003DMT400059346 Potato plasma membrane 36.15 28.29
PGSC0003DMT400076250 Potato plasma membrane 35.34 28.21
PGSC0003DMT400008336 Potato plasma membrane 31.98 28.16
PGSC0003DMT400008335 Potato plasma membrane 32.08 27.95
PGSC0003DMT400076247 Potato cytosol 3.36 19.08
Protein Annotations
Gene3D:1.10.510.10EntrezGene:102602562MapMan:18.4.1.11Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000003
GO:GO:0000166GO:GO:0000325GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007275
GO:GO:0008150GO:GO:0008152GO:GO:0009506GO:GO:0009653GO:GO:0009791GO:GO:0009908
GO:GO:0009934GO:GO:0009987GO:GO:0010080GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538GO:GO:0033612GO:GO:0040007GO:GO:0043621GO:GO:0048833
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypUniProt:M1ALZ9PFAM:PF00560PFAM:PF07714PFAM:PF08263
PFAM:PF13855EnsemblPlantsGene:PGSC0003DMG400009941PGSC:PGSC0003DMG400009941EnsemblPlants:PGSC0003DMT400025747ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27000PANTHER:PTHR27000:SF231InterPro:Prot_kinase_domSMART:SM00220SMART:SM00369SUPFAM:SSF52047
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI000296A678RefSeq:XP_006342066.1SEG:seg:::
Description
Receptor protein kinase CLAVATA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400009941]
Coordinates
chr4:-:70953027..70957437
Molecular Weight (calculated)
108290.0 Da
IEP (calculated)
6.717
GRAVY (calculated)
0.031
Length
982 amino acids
Sequence
(BLAST)
001: MSLPKKISLF LQIFIFFVFS INANSDLETL LKLKESMVAP GTSALLDWNN NTNYPFSHCS FSGVTCNNNS HVISINITNV PLFGTIPPEI GLLLNLENLI
101: IFGDNITGTL PLEMSQLSSI KHVNLSYNNF SGPFPREILL GLIKLESFDI YNNNFTGELP TEFVKLKKLE TLHLGGNYFH GEIPEVYSHI VSLKWLGLEG
201: NSLTGKIPKS LASLPNLEEL RLGYYNSYEG GIPSEFGNIS TLKLLDLGNC NLDGEVPPSL GNLKKLHTLF LQVNRLTGRI PSELSGLESL MSFDLSFNQL
301: TGEIPESFVK LQNLTLINLF RNNLHGPIPP FIGDLPNLEV LQIWGNNFTL ELPENLGRNG RFLFLDISIN HFTGRIPPDL CKGGKLKTLI LMENYFFGPI
401: PEQLGECKSL ARIRVRKNYL NGTIPAGFFK LPALDMLELD NNYFTGELPT EINANNLTKL VLSNNWITGN IPPSLGNLKN LVTLSLDMNR LSGEIPQEIA
501: SLNKLVTINL SGNNLTGEIP SSIALCSELT LVDLSRNQLV GEVPKEITKL NSLNALNLSR NQLSGAIPGE VGVMNGLTVL DLSYNDLSGR RPTNGQLKFF
601: NDTYFVGNPK LCSPHATFCP SASNSPQNAL KIHSGKFTTI QLVITIIILV TVALLLAVTV LFIKKEKFKN SKLWKLTAFQ KLDFRAEDVL ECLKEENIIG
701: KGGAGVVYRG SMSNGIDVAI KKLVGRGTGH HDHGFSAEIQ TLGRIRHRNI VRLLGYVSNK DTNLLLYEYM SNGSLGEMLH GAKGAHLKWE TRYRIAVEAA
801: KGLCYLHHDC SPSIIHRDVK SNNILLDSDY EAHVADFGLA KFLQDAGASE CMSSIAGSYG YIAPEYAYTL KVDQKSDVYS FGVVLLELIT GHKPVGEFGD
901: GVDIVRWVNK TMSELSQPSD AASVLAVVDS RLHSYPLASV INLFKIAIMC VEEESCARPT MREVVHMLTN LPQSTTTTLL AL
Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)
001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
Arabidopsis Description
CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.