Factsheet for Solyc04g081590.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g081590.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	Solyc04g081590.2.1	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025747	Potato	plasma membrane	96.75	97.15
VIT_18s0001g14610.t01	Wine grape	plasma membrane	67.44	67.86
Bra015812.1-P	Field mustard	cytosol	51.32	66.58
AT1G75820.1	Thale cress	plasma membrane	62.07	62.45
CDX73202	Canola	plasma membrane	62.47	62.41
CDX87661	Canola	plasma membrane	60.65	61.97
KRH29397	Soybean	plasma membrane	59.94	60.24
KRH24413	Soybean	plasma membrane	60.24	60.18
GSMUA_Achr9P24170_001	Banana	plasma membrane	48.38	58.53
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	42.49	55.35
KRH29398	Soybean	cytosol	35.09	54.75
Os06t0717200-01	Rice	plasma membrane	54.36	53.92
KXG20897	Sorghum	plasma membrane	54.16	53.4
Zm00001d014793_P001	Maize	plasma membrane	53.65	53.11
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	32.45	52.37
Solyc02g091840.2.1	Tomato	extracellular	51.12	49.61
HORVU0Hr1G022670.2	Barley	mitochondrion	53.75	49.53
Solyc01g103530.2.1	Tomato	plasma membrane	49.8	49.35
Solyc01g080770.2.1	Tomato	plasma membrane	45.94	47.19
TraesCS7D01G521200.1	Wheat	plasma membrane	51.72	46.11
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	19.88	43.85
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	19.37	42.44
Solyc05g051640.2.1	Tomato	plasma membrane	40.16	39.13
Solyc09g064520.2.1	Tomato	plasma membrane	40.26	38.92
Solyc03g093330.2.1	Tomato	vacuole	38.44	38.59
Solyc04g050170.2.1	Tomato	plasma membrane	39.55	38.54
Solyc09g091260.2.1	Tomato	plasma membrane	39.45	35.11
Solyc12g056730.1.1	Tomato	plasma membrane, vacuole	37.63	34.45
Solyc12g098100.1.1	Tomato	plasma membrane	37.73	33.91
Solyc07g056410.2.1	Tomato	plasma membrane	38.03	33.81
Solyc04g064940.2.1	Tomato	plasma membrane	36.0	32.63
Solyc07g065860.2.1	Tomato	plasma membrane	35.4	32.26
Solyc03g112580.2.1	Tomato	plasma membrane	36.11	32.22
Solyc07g005010.2.1	Tomato	plasma membrane	31.14	32.01
Solyc09g061940.1.1	Tomato	plasma membrane	35.8	31.29
Solyc09g091400.2.1	Tomato	plasma membrane	35.29	30.88
Solyc03g123860.2.1	Tomato	plasma membrane	33.77	30.16
Solyc03g082470.2.1	Tomato	plasma membrane	31.54	27.89
Solyc03g082450.2.1	Tomato	plasma membrane	31.44	27.8

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000003	GO:GO:0000166
GO:GO:0000325	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005102	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009934
GO:GO:0009987	GO:GO:0010080	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0033612	GO:GO:0040007	GO:GO:0043621	GO:GO:0048833	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	UniProt:K4BVN8	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc04g081590.2	EnsemblPlants:Solyc04g081590.2.1	TMHMM:TMhelix	UniParc:UPI0002766071	SEG:seg

Description

Receptor protein kinase CLAVATA1 [Source:Projected from Arabidopsis thaliana (AT1G75820) UniProtKB/Swiss-Prot;Acc:Q9SYQ8]

Coordinates

chr4:-:65533005..65537274

Molecular Weight (calculated)

108617.0 Da

IEP (calculated)

6.743

GRAVY (calculated)

0.005

Length

986 amino acids

Sequence
(BLAST)

001: MSLPKKISLF LQIFIFFVFT INANSDLEAL LKLKESMVAP GTSALLDWNN NTKNYPFSHC SFSGITCNNN SHVISINITN VPLFGTIPPE IGLLQNLENL
101: TIFGDNLTGT LPLEMSQLSS IKHVNLSYNN FSGPFPREIL LGLIKLESFD IYNNNFTGEL PIEVVKLKNL ETLHLGGNYF HGEIPEVYSH IVSLKWLGLE
201: GNSLTGKIPK SLALLPNLEE LRLGYYNSYE GGIPSEFGNI STLKLLDLGN CNLDGEVPPS LGNLKKLHSL FLQVNRLTGH IPSELSGLES LMSFDLSFNQ
301: LTGEIPESFV KLQKLTLINL FRNNLHGPIP SFIGDLPNLE VLQIWGNNFT LELPENLGRN GRLLFLDISI NHFTGRIPPD LCKGGKLKTL ILMENYFFGP
401: IPEQLGECKS LTRIRVRKNY LNGTIPAGFF KLPALDMLEL DNNYFTGELP TEINANNLTK LVLSNNWITG NIPPSLGNLK NLVTLSLDVN RLSGEIPQEI
501: ASLNKLVTIN LSGNNLTGEI PSSIALCSEL TLVDLSRNQL VGEVPKEITK LNSLNALNLS RNQLSGAIPG EVGVMNGLTV LDLSYNDLSG RRPTNGQLKF
601: FNDTYFVGNP KLCSPHATFC PSASNSPQNA LKIHAGKFTT TQLVITIIIL VTVALLLAVT VLFIKKEKFK NSQLWKLTAF QKLDFRADDV LECLKEENII
701: GKGGAGVVYR GSMSNGIDVA IKKLVGRGTG HHDHGFSAEI QTLGRIRHRN IVRLLGYVSN KDTNLLLYEY MSNGSLGEML HGAKGAHLKW ETRYRIAVEA
801: AKGLCYLHHD CSPSIIHRDV KSNNILLDSD YEAHVADFGL AKFLQDAGAS ECMSSIAGSY GYIAPEYAYT LKVDQKSDVY SFGVVLLELI TGHKPVGEFG
901: DGVDIVRWVN KTMSELSQPS DAASVLAVVD SRLHSYPLAS VVNLFKIAMM CVEEESCARP SMREVVHMLT NPPPQSTNTT TTLRAL

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.