CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24413
KRH29397
KRH29398

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G75820.1	KRH24413	AT1G75820.1	9294234
AT1G75820.1	KRH29397	AT1G75820.1	9294234
AT1G75820.1	KRH29398	AT1G75820.1	9294234

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24413	Soybean	plasma membrane	90.83	90.27
KRH29398	Soybean	cytosol	55.35	85.92
VIT_18s0001g14610.t01	Wine grape	plasma membrane	63.1	63.16
Bra015812.1-P	Field mustard	cytosol	48.62	62.76
CDX73202	Canola	plasma membrane	60.86	60.49
AT1G75820.1	Thale cress	plasma membrane	60.24	60.31
PGSC0003DMT400025747	Potato	plasma membrane	60.35	60.29
CDX87661	Canola	plasma membrane	59.02	60.0
Solyc04g081590.2.1	Tomato	plasma membrane	60.24	59.94
GSMUA_Achr9P24170_001	Banana	plasma membrane	46.18	55.58
TraesCS7A01G533800.1	Wheat	cytosol, plasma membrane, plastid	41.9	54.29
KXG20897	Sorghum	plasma membrane	53.62	52.6
Os06t0717200-01	Rice	plasma membrane	53.01	52.31
Zm00001d014793_P001	Maize	plasma membrane	52.5	51.71
GSMUA_Achr3P26680_001	Banana	extracellular, plasma membrane	30.58	49.1
HORVU0Hr1G022670.2	Barley	mitochondrion	53.52	49.07
KRH04350	Soybean	plasma membrane	49.03	47.62
KRH58184	Soybean	plasma membrane	48.83	47.52
KRH77190	Soybean	plasma membrane	48.73	47.23
KRH28297	Soybean	plasma membrane	48.62	47.13
TraesCS7D01G521200.1	Wheat	plasma membrane	51.68	45.84
KRH14558	Soybean	plasma membrane	45.87	45.64
KRG99047	Soybean	plasma membrane	45.57	45.29
KRH45951	Soybean	plasma membrane	45.77	45.17
KRH73570	Soybean	plasma membrane	45.87	45.05
HORVU5Hr1G085130.1	Barley	endoplasmic reticulum, plasma membrane	19.06	41.83
TraesCSU01G171600.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	19.16	41.78
KRH32252	Soybean	plasma membrane	38.23	36.95
KRH23822	Soybean	plasma membrane	38.43	36.89
KRH19626	Soybean	nucleus, plasma membrane	36.29	36.55
KRH39953	Soybean	plasma membrane	38.33	36.5
KRH67464	Soybean	plasma membrane	38.12	36.45
KRG95745	Soybean	plasma membrane	37.82	36.3
KRG92719	Soybean	mitochondrion, plasma membrane	37.92	36.05
KRH34124	Soybean	mitochondrion, plasma membrane	37.82	35.88
KRG91721	Soybean	plasma membrane	36.7	33.36
KRH37902	Soybean	plasma membrane	32.42	33.3
KRH35050	Soybean	plasma membrane	36.49	33.12
KRH12906	Soybean	plasma membrane	31.91	32.6
KRG90257	Soybean	plasma membrane	36.39	32.05
KRH33496	Soybean	plasma membrane	36.49	32.02
KRH43841	Soybean	plasma membrane	36.39	31.88
KRH13628	Soybean	plasma membrane	36.19	31.75
KRH64523	Soybean	plasma membrane	34.25	30.85
KRH53418	Soybean	plasma membrane	34.05	30.67
KRH18124	Soybean	vacuole	33.84	30.51
KRH03251	Soybean	plasma membrane	34.86	30.48
KRH15990	Soybean	extracellular, plasma membrane, vacuole	33.54	30.27
KRG92156	Soybean	plasma membrane	33.03	29.94
KRH75100	Soybean	plasma membrane, plastid	33.84	29.86
KRH34632	Soybean	plasma membrane	32.62	29.55
KRH70959	Soybean	plastid	33.95	29.24
KRH57106	Soybean	plasma membrane	32.82	29.17
KRH73937	Soybean	plasma membrane	31.91	28.98
KRH46804	Soybean	plasma membrane	34.05	28.97
KRH46430	Soybean	plasma membrane	32.01	28.75
KRG99860	Soybean	plasma membrane	33.64	28.75
KRG98433	Soybean	plasma membrane	31.91	28.72
KRH14195	Soybean	plasma membrane	31.91	28.64
KRH09613	Soybean	plasma membrane	31.4	28.36
KRH37162	Soybean	plasma membrane	34.15	26.65
KRH12156	Soybean	plasma membrane	34.15	26.65
KRH58543	Soybean	plasma membrane	33.95	26.2

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A0R0HPY5	EMBL:ACUP02006800
EnsemblPlantsGene:GLYMA_11G114100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	EnsemblPlants:KRH29397
ProteinID:KRH29397	ProteinID:KRH29397.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF231	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0006ED80F0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:8718226..8721653

Molecular Weight (calculated)

108513.0 Da

IEP (calculated)

7.434

GRAVY (calculated)

-0.018

Length

981 amino acids

Sequence
(BLAST)

001: MRSCVCYTLL LFVFFIWLHV ATCSSFSDMD ALLKLKESMK GDRAKDDALH DWKFSTSLSA HCFFSGVSCD QELRVVAINV SFVPLFGHVP PEIGELDKLE
101: NLTISQNNLT GELPKELAAL TSLKHLNISH NVFSGYFPGK IILPMTELEV LDVYDNNFTG SLPEEFVKLE KLKYLKLDGN YFSGSIPESY SEFKSLEFLS
201: LSTNSLSGNI PKSLSKLKTL RILKLGYNNA YEGGIPPEFG TMESLKYLDL SSCNLSGEIP PSLANMRNLD TLFLQMNNLT GTIPSELSDM VSLMSLDLSF
301: NGLTGEIPTR FSQLKNLTLM NFFHNNLRGS VPSFVGELPN LETLQLWENN FSSELPQNLG QNGKFKFFDV TKNHFSGLIP RDLCKSGRLQ TFLITDNFFH
401: GPIPNEIANC KSLTKIRASN NYLNGAVPSG IFKLPSVTII ELANNRFNGE LPPEISGDSL GILTLSNNLF TGKIPPALKN LRALQTLSLD TNEFLGEIPG
501: EVFDLPMLTV VNISGNNLTG PIPTTFTRCV SLAAVDLSRN MLDGEIPKGM KNLTDLSIFN VSINQISGSV PDEIRFMLSL TTLDLSYNNF IGKVPTGGQF
601: LVFSDKSFAG NPNLCSSHSC PNSSLKKRRG PWSLKSTRVI VMVIALATAA ILVAGTEYMR RRRKLKLAMT WKLTGFQRLN LKAEEVVECL KEENIIGKGG
701: AGIVYRGSMR NGSDVAIKRL VGAGSGRNDY GFKAEIETVG KIRHRNIMRL LGYVSNKETN LLLYEYMPNG SLGEWLHGAK GGHLKWEMRY KIAVEAAKGL
801: CYLHHDCSPL IIHRDVKSNN ILLDAHFEAH VADFGLAKFL YDLGSSQSMS SIAGSYGYIA PEYAYTLKVD EKSDVYSFGV VLLELIIGRK PVGEFGDGVD
901: IVGWVNKTRL ELSQPSDAAV VLAVVDPRLS GYPLISVIYM FNIAMMCVKE VGPTRPTMRE VVHMLSNPPH STTHTHNLIN L

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.