CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32252	Soybean	plasma membrane	93.12	89.36
KRG95745	Soybean	plasma membrane	79.06	75.34
KRH67464	Soybean	plasma membrane	78.95	74.95
GSMUA_Achr1P06510_001	Banana	cytosol	48.67	68.4
PGSC0003DMT400022119	Potato	plasma membrane	70.84	67.12
Solyc09g064520.2.1	Tomato	plasma membrane	69.92	66.76
AT4G28650.1	Thale cress	plasma membrane	67.76	65.15
CDY35204	Canola	plasma membrane	66.32	64.28
Bra011046.1-P	Field mustard	plasma membrane	66.94	64.17
CDY38373	Canola	plasma membrane	62.94	63.72
KRG92719	Soybean	mitochondrion, plasma membrane	64.99	61.34
KRH34124	Soybean	mitochondrion, plasma membrane	64.68	60.93
GSMUA_Achr11P...	Banana	plasma membrane	47.74	59.92
GSMUA_Achr2P04260_001	Banana	plasma membrane	47.64	58.96
Zm00001d014971_P001	Maize	plasma membrane	58.11	54.79
TraesCS4D01G307500.1	Wheat	plasma membrane	58.01	54.64
TraesCS4B01G309300.1	Wheat	plasma membrane	57.8	54.45
EES06133	Sorghum	plasma membrane	58.01	54.22
HORVU4Hr1G079040.1	Barley	plasma membrane	57.49	54.16
TraesCS4A01G409400.1	Wheat	plasma membrane	57.49	54.16
EER92863	Sorghum	plasma membrane	57.49	53.9
TraesCS6A01G029100.1	Wheat	plasma membrane	56.16	53.21
TraesCS6D01G033300.1	Wheat	plasma membrane	56.16	53.16
Os02t0111800-02	Rice	plasma membrane	56.67	53.08
TraesCS6B01G042000.1	Wheat	plasma membrane	56.06	53.01
Zm00001d048390_P001	Maize	plasma membrane	56.98	53.01
HORVU6Hr1G005460.1	Barley	plasma membrane	56.16	52.95
Zm00001d027645_P001	Maize	plasma membrane	56.47	52.88
TraesCS5D01G517500.1	Wheat	plasma membrane, vacuole	36.34	48.1
Os03t0145102-00	Rice	plasma membrane	47.13	46.36
TraesCS5B01G517600.1	Wheat	plasma membrane	36.24	45.49
VIT_07s0005g04390.t01	Wine grape	plasma membrane	63.14	43.37
KRH23822	Soybean	plasma membrane	44.87	42.76
KRH39953	Soybean	plasma membrane	44.87	42.43
KRH58184	Soybean	plasma membrane	40.86	39.48
KRH04350	Soybean	plasma membrane	40.76	39.31
KRH14558	Soybean	plasma membrane	39.73	39.25
KRH77190	Soybean	plasma membrane	40.76	39.23
KRH28297	Soybean	plasma membrane	40.66	39.13
KRH73570	Soybean	plasma membrane	39.73	38.74
KRG99047	Soybean	plasma membrane	39.01	38.5
KRH45951	Soybean	plasma membrane	39.22	38.43
KRH29397	Soybean	plasma membrane	36.55	36.29
KRH24413	Soybean	plasma membrane	36.76	36.27
KRH37902	Soybean	plasma membrane	35.52	36.23
KRH12906	Soybean	plasma membrane	35.52	36.04
KRH29398	Soybean	cytosol	22.59	34.81
KRH75100	Soybean	plasma membrane, plastid	37.27	32.64
KRH18124	Soybean	vacuole	35.93	32.17
KRH70959	Soybean	plastid	37.27	31.87
KRH33496	Soybean	plasma membrane	36.45	31.75
KRH15990	Soybean	extracellular, plasma membrane, vacuole	35.42	31.74
KRG90257	Soybean	plasma membrane	36.24	31.69
KRG91721	Soybean	plasma membrane	35.01	31.6
KRH53418	Soybean	plasma membrane	35.22	31.5
KRH46804	Soybean	plasma membrane	37.27	31.48
KRH64523	Soybean	plasma membrane	35.11	31.41
KRH35050	Soybean	plasma membrane	34.6	31.17
KRG99860	Soybean	plasma membrane	36.55	31.01
KRH43841	Soybean	plasma membrane	35.63	30.98
KRH13628	Soybean	plasma membrane	35.42	30.86
KRH03251	Soybean	plasma membrane	34.8	30.21
KRH34632	Soybean	plasma membrane	33.06	29.73
KRG92156	Soybean	plasma membrane	32.85	29.57
KRH14195	Soybean	plasma membrane	33.16	29.55
KRH73937	Soybean	plasma membrane	32.55	29.35
KRH57106	Soybean	plasma membrane	33.06	29.17
KRH46430	Soybean	plasma membrane	32.65	29.12
KRG98433	Soybean	plasma membrane	32.24	28.81
KRH09613	Soybean	plasma membrane	31.01	27.81
KRH58543	Soybean	plasma membrane	33.98	26.04
KRH12156	Soybean	plasma membrane	33.37	25.86
KRH37162	Soybean	plasma membrane	33.26	25.78

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EMBL:ACUP02008193	EnsemblPlantsGene:GLYMA_13G127100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	UniProt:I1LYP4	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
EnsemblPlants:KRH19626	ProteinID:KRH19626	ProteinID:KRH19626.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296DCF6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:24013027..24016923

Molecular Weight (calculated)

106374.0 Da

IEP (calculated)

7.140

GRAVY (calculated)

-0.006

Length

974 amino acids

Sequence
(BLAST)

001: MQMKTQFFLY FCCICCFSYG FADAANYEAS ALFSIKEGLI DPLNSLHDWE LVEKSEGKDA AHCNWTGIRC NSGGAVEKLD LSRVNLSGIV SNEIQRLKSL
101: ISLNLCCNEF SSSLLMTLNA SSNNFSGFLP EDFGNFSSLE TLDLRGSFFE GSIPKSFSKL HKLKFLGLSG NNLTGESPGA ALGKLSSLEC MIIGYNKFEG
201: GIPADFGNLT KLKYLDIAEG NLGGEIPAEL GKLKMLNTVF LYKNKFEGKI PSEIGNLTSL VQLDLSDNML SGNIPAEISR LKNLQLLNFM RNRLSGPVPS
301: GLGDLPQLEV LELWNNSLSG PLPRNLGKNS PLQWLDVSSN LLSGEIPETL CTKGNLTKLI LFNNAFLGPI PASLSTCPSL VRFRIQNNFL NGTIPVGLGK
401: LGKLQRLELA NNSLTGGIPD DIGSSTSLSF IDFSRNNLHS SLPSTIISIP NLQTLIVSNN NLRGEIPDQF QDCPSLGVLD LSSNRFSGII PSSIASCQKL
501: VNLNLQNNQL TGGIPKELAS MPTWAILDLA NNTLSGHMPE SFGMSPALET FNVSHNKLEG PVPENGMLRT INPNDLVGNA GLCGGVLPPC GQTSAYPLRH
601: GSSPAKHILV GWIIGVSSIL AIGVATLVAR SLYMMRYTDG LCFPERFYKG RKVLPWRLMA FQRLDFTSSD ILSCIKDTNM IGMGATGVVY KAEIPQSSTI
701: VAVKKLRRSG SDIEVGSSDD LVGEVNLLRR LRHRNIVRLL GFLYNDADVM IVYEFMHNGN LGDALHGKQA GRLLVDWVSR YNIALGIAQG LAYLHHDCHP
801: PVIHQDIKSN NILLDANLEA RIADFGLAKM MLWKNETVSM IAGSYGYIAP EYGYSLKVDE KIDIYSYGVV LLELLTGKRS LDPEFGESID IVGWIRRKID
901: NKSPEEALDP SMLLVLRMAL LCTAKFPKDR PSMRDVIMML GEAKPRRKSG RSSETFSANK EMPAISSSPV SGLL

Best Arabidopsis Sequence Match ( AT4G28650.1 )
(BLAST)

0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL

Arabidopsis Description

MIK1MDIS1-interacting receptor like kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0G7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.