Factsheet for TraesCS6B01G042000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G029100.1	Wheat	plasma membrane	97.86	98.05
TraesCS6D01G033300.1	Wheat	plasma membrane	96.8	96.89
HORVU6Hr1G005460.1	Barley	plasma membrane	95.53	95.26
Os02t0111800-02	Rice	plasma membrane	80.97	80.19
EES06133	Sorghum	plasma membrane	80.1	79.17
Zm00001d014971_P001	Maize	plasma membrane	79.32	79.09
GSMUA_Achr1P06510_001	Banana	cytosol	49.03	72.87
GSMUA_Achr2P04260_001	Banana	plasma membrane	47.96	62.77
TraesCS4B01G309300.1	Wheat	plasma membrane	62.33	62.09
Solyc09g064520.2.1	Tomato	plasma membrane	58.06	58.63
PGSC0003DMT400022119	Potato	plasma membrane	58.25	58.37
KRG95745	Soybean	plasma membrane	57.67	58.12
KRH32252	Soybean	plasma membrane	56.8	57.64
KRH67464	Soybean	plasma membrane	57.09	57.31
AT4G28650.1	Thale cress	plasma membrane	55.63	56.56
PGSC0003DMT400010618	Potato	plasma membrane	55.53	56.52
KRH19626	Soybean	nucleus, plasma membrane	53.01	56.06
Solyc04g050170.2.1	Tomato	plasma membrane	55.05	56.03
CDY35204	Canola	plasma membrane	54.66	56.02
Bra011046.1-P	Field mustard	plasma membrane	54.95	55.71
CDY38373	Canola	plasma membrane	51.65	55.3
KRG92719	Soybean	mitochondrion, plasma membrane	54.85	54.75
KRH34124	Soybean	mitochondrion, plasma membrane	54.66	54.45
CDX97498	Canola	plasma membrane	53.69	54.16
CDY31136	Canola	plasma membrane	53.3	53.82
Bra030734.1-P	Field mustard	plasma membrane	53.2	53.67
TraesCS5B01G517600.1	Wheat	plasma membrane	40.1	53.22
AT1G08590.1	Thale cress	plasma membrane	52.33	52.38
TraesCS7B01G205900.1	Wheat	plastid	43.2	41.43
TraesCS2B01G266700.1	Wheat	plasma membrane	40.39	40.66
TraesCS5B01G412400.1	Wheat	plasma membrane	40.49	40.45
TraesCS4B01G234600.1	Wheat	plasma membrane	38.93	40.22
VIT_07s0005g04390.t01	Wine grape	plasma membrane	53.2	38.65
TraesCS4B01G091400.1	Wheat	plasma membrane	38.06	38.21
TraesCS1B01G479300.1	Wheat	plasma membrane	38.54	37.52
TraesCS3B01G107600.1	Wheat	plasma membrane	38.64	35.76
TraesCS7B01G260400.1	Wheat	plasma membrane	37.09	35.73
TraesCS1B01G134100.1	Wheat	plasma membrane	37.18	34.26
TraesCS2B01G005000.1	Wheat	plasma membrane	37.96	33.56
TraesCS5B01G253700.1	Wheat	plasma membrane	35.44	33.33
TraesCS7B01G133000.1	Wheat	plasma membrane	35.34	33.15
TraesCS2B01G265700.1	Wheat	plasma membrane	35.34	32.94
TraesCS2B01G379400.1	Wheat	plasma membrane	35.34	32.91
TraesCS2B01G105800.1	Wheat	cytosol	17.48	31.25
TraesCS7B01G110700.1	Wheat	plasma membrane	32.33	29.79
TraesCS7B01G052200.1	Wheat	plasma membrane	30.97	29.32
TraesCS5B01G210300.1	Wheat	plasma membrane	32.23	28.97
TraesCS2B01G251700.1	Wheat	plasma membrane	33.3	27.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF42	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G042000	EnsemblPlants:TraesCS6B01G042000.1	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:25923566..25926658

Molecular Weight (calculated)

107338.0 Da

IEP (calculated)

6.294

GRAVY (calculated)

0.204

Length

1030 amino acids

Sequence
(BLAST)

0001: MAARVAVLVV AALAVVLSGG GNVGAAGGGG GSERGALLAL KAGFVDPLGV LADWKAAGSP HCKWAGVRCN AAGLVDGLDL AGRNLSGKVS ADLLRLPALA
0101: VLNLSSNAFA AALPRSLAPL SGLQVFDVSQ NSFEGAFPAG LGSCAGLVAV NGSGNNFVGA LPADLANATS LESIDMRGDF FSGGIPAAYR SLTRLRFLGL
0201: SGNNIGGRIP PELGELESLE SLIIGYNELE GPIPPDLGNL ANLQDLDLAI GNLDGPIPPE IGRLPALTSL FLYKNSLEGR IPPELGNASS LVFLDLSDNL
0301: LTGPIPAEVA QLSNLQLLNL MCNHLDGAVP AAIGDMKKLE VLELWNNSLT GALPASLGRS SPLQWVDVSS NALTGEIPAG ICDGKALAKL IMFSNGFSGE
0401: IPAGVASCAS LVRLRAQGNR LNGTIPAGFG KLPLLQRLEL AGNELSGEIP GALASSASLS FIDVSRNRLQ GSLPSSLFAI PGLQSFMAAG NMITGELPDQ
0501: FQDCLALGAL DLSGNRLLGK IPSSLASCAR LVNLNLRQNG LTGEIPPALA KMPALAILDL SSNFLTGGIP DNFGGSPALE TLNLAYNNLT GPVPGNGVLR
0601: TINPDELAGN AGLCGGVLPP CSGSHVAGLS RARGGSGARL KHVAVGWLVG MVVVIAAFTA LFGGWHAYRR WYAVGGAGEY ESGAWPWRLT AFQRLGFTCA
0701: DVLACVKEAN VVGMGATGVV YKAELPRART VIAVKKLWRP AATDGDAVRN LTDDVLKEVG LLGRLRHRNI VRLLGYMHND ADAMMLYEFM PNGSLWEALH
0801: GGAPESRTML TDWVSRYDVA AGVAQGLAYL HHDCHPPVLH RDIKSNNILL DADMQARVAD FGLARALGRS GESVSVVAGS YGYIAPEYGY TLKVDQKSDI
0901: YSYGVVLMEL ITGRRPVETA AFGEGQDIVG WVREKIRSNT VEEHLDPLVG GGCAHVREEM LLVLRIAVLC TAKLPRDRPS MRDVLTMLGE AKPRRKSGSS
1001: ATAGNVAAVA VAAPVVDKDR PVFSTTPDSV

Best Arabidopsis Sequence Match ( AT4G28650.1 )
(BLAST)

0001: MKMKIIVLFL YYCYIGSTSS VLASIDNVNE LSVLLSVKST LVDPLNFLKD WKLSDTSDHC NWTGVRCNSN GNVEKLDLAG MNLTGKISDS ISQLSSLVSF
0101: NISCNGFESL LPKSIPPLKS IDISQNSFSG SLFLFSNESL GLVHLNASGN NLSGNLTEDL GNLVSLEVLD LRGNFFQGSL PSSFKNLQKL RFLGLSGNNL
0201: TGELPSVLGQ LPSLETAILG YNEFKGPIPP EFGNINSLKY LDLAIGKLSG EIPSELGKLK SLETLLLYEN NFTGTIPREI GSITTLKVLD FSDNALTGEI
0301: PMEITKLKNL QLLNLMRNKL SGSIPPAISS LAQLQVLELW NNTLSGELPS DLGKNSPLQW LDVSSNSFSG EIPSTLCNKG NLTKLILFNN TFTGQIPATL
0401: STCQSLVRVR MQNNLLNGSI PIGFGKLEKL QRLELAGNRL SGGIPGDISD SVSLSFIDFS RNQIRSSLPS TILSIHNLQA FLVADNFISG EVPDQFQDCP
0501: SLSNLDLSSN TLTGTIPSSI ASCEKLVSLN LRNNNLTGEI PRQITTMSAL AVLDLSNNSL TGVLPESIGT SPALELLNVS YNKLTGPVPI NGFLKTINPD
0601: DLRGNSGLCG GVLPPCSKFQ RATSSHSSLH GKRIVAGWLI GIASVLALGI LTIVTRTLYK KWYSNGFCGD ETASKGEWPW RLMAFHRLGF TASDILACIK
0701: ESNMIGMGAT GIVYKAEMSR SSTVLAVKKL WRSAADIEDG TTGDFVGEVN LLGKLRHRNI VRLLGFLYND KNMMIVYEFM LNGNLGDAIH GKNAAGRLLV
0801: DWVSRYNIAL GVAHGLAYLH HDCHPPVIHR DIKSNNILLD ANLDARIADF GLARMMARKK ETVSMVAGSY GYIAPEYGYT LKVDEKIDIY SYGVVLLELL
0901: TGRRPLEPEF GESVDIVEWV RRKIRDNISL EEALDPNVGN CRYVQEEMLL VLQIALLCTT KLPKDRPSMR DVISMLGEAK PRRKSNSNEE NTSRSLAEKH
1001: SSVFSTSPVN GLL

Arabidopsis Description

MIK1MDIS1-interacting receptor like kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M0G7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.