Factsheet for TraesCS4B01G234600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G235800.1	Wheat	plasma membrane	97.79	97.79
TraesCS4A01G059000.1	Wheat	plasma membrane	96.99	96.99
HORVU4Hr1G065620.1	Barley	plasma membrane	96.69	96.88
Os03t0228800-01	Rice	plasma membrane	87.16	86.3
KXG39823	Sorghum	plasma membrane	84.75	84.42
Zm00001d028317_P001	Maize	plasma membrane	84.15	81.22
GSMUA_Achr4P14590_001	Banana	cytosol	49.15	68.44
GSMUA_Achr4P03140_001	Banana	plasma membrane	50.45	65.92
CDY45620	Canola	plasma membrane	63.59	65.16
CDY02112	Canola	plasma membrane	62.79	64.6
CDY23037	Canola	plasma membrane	62.09	64.01
CDY08759	Canola	plasma membrane	62.19	63.85
GSMUA_Achr5P02010_001	Banana	plasma membrane, vacuole	46.64	63.27
TraesCS5B01G412400.1	Wheat	plasma membrane	65.4	63.24
AT5G65700.1	Thale cress	plasma membrane	63.49	63.11
Bra024413.1-P	Field mustard	plasma membrane, plastid	62.79	62.79
KRH04350	Soybean	plasma membrane	63.49	62.67
Bra012925.1-P	Field mustard	plasma membrane	62.39	62.64
KRH58184	Soybean	plasma membrane	63.19	62.5
AT3G49670.1	Thale cress	plasma membrane	62.69	62.38
TraesCS2B01G266700.1	Wheat	plasma membrane	63.89	62.27
KRH77190	Soybean	plasma membrane	63.09	62.15
VIT_00s1353g00010.t01	Wine grape	plasma membrane	63.39	62.14
GSMUA_Achr4P07370_001	Banana	plasma membrane	48.55	61.81
KRH28297	Soybean	plasma membrane	62.29	61.36
PGSC0003DMT400078706	Potato	plasma membrane	61.89	60.67
Solyc02g091840.2.1	Tomato	extracellular	61.69	60.53
PGSC0003DMT400043020	Potato	plasma membrane	61.28	59.78
GSMUA_Achr4P32160_001	Banana	plasma membrane	44.73	59.55
GSMUA_Achr7P27590_001	Banana	golgi, plasma membrane	36.91	59.35
GSMUA_Achr7P00790_001	Banana	plasma membrane	46.14	58.9
GSMUA_Achr3P30640_001	Banana	plasma membrane	44.83	54.31
TraesCS4B01G091400.1	Wheat	plasma membrane	53.06	51.56
TraesCS1B01G479300.1	Wheat	plasma membrane	52.66	49.62
TraesCS4B01G309300.1	Wheat	plasma membrane	41.22	39.75
TraesCS6B01G042000.1	Wheat	plasma membrane	40.22	38.93
TraesCS7B01G205900.1	Wheat	plastid	38.62	35.85
TraesCS7B01G260400.1	Wheat	plasma membrane	38.42	35.83
TraesCS5B01G517600.1	Wheat	plasma membrane	27.08	34.79
TraesCS2B01G265700.1	Wheat	plasma membrane	37.41	33.76
TraesCS2B01G105800.1	Wheat	cytosol	18.96	32.81
TraesCS7B01G133000.1	Wheat	plasma membrane	35.71	32.42
TraesCS2B01G379400.1	Wheat	plasma membrane	35.91	32.37
TraesCS1B01G134100.1	Wheat	plasma membrane	36.11	32.2
TraesCS3B01G107600.1	Wheat	plasma membrane	35.41	31.72
TraesCS5B01G253700.1	Wheat	plasma membrane	34.8	31.69
TraesCS2B01G005000.1	Wheat	plasma membrane	37.01	31.67
TraesCS7B01G052200.1	Wheat	plasma membrane	30.49	27.94
TraesCS7B01G110700.1	Wheat	plasma membrane	31.29	27.91
TraesCS5B01G210300.1	Wheat	plasma membrane	31.9	27.75
TraesCS2B01G251700.1	Wheat	plasma membrane	35.01	27.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF00560	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF91	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G234600	EnsemblPlants:TraesCS4B01G234600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr4B:-:489087705..489090937

Molecular Weight (calculated)

105518.0 Da

IEP (calculated)

5.737

GRAVY (calculated)

0.181

Length

997 amino acids

Sequence
(BLAST)

001: MARSMSATHT FLLAVLLLLL ATATSSIASG SPTSAASLEA AALLNLSVAL ADPSGYLSAH WTPATPLCSW PRLSCDAAGS RVISLDLSAL NLTGPIPAAA
101: LSSVPHLRSL NLSNNLFNST FPDGLIASLT DIRVLDLYNN NLTGPLPAAL PNLTNLVHLH LGGNFFSGSI PTSYGQWSRI RYLALSGNEL TGEIPPELGN
201: LSTLRELYLG YFNSFTGGIP PELGRLRQLV RLDMASCGIS GKIPPELANL TTLDTLFLQI NALSGRLPSE IGVMGALKSL DLSNNLFAGE IPASFASLKN
301: MTLLNLFRNR LAGEIPEFIG DLPNLEVLQL WENNFTGGVP AQLGVAATRL RIVDVSTNKL TGVLPTELCA GGRLETFIAL GNSLFGGIPD GLAGCPSLTR
401: IRLGENYLNG TIPAKLFTLQ NLTQVELHNN LLSGEVRLDA DEVSPSIGEL SLYNNGLSGP VPAGIGGLVG LQKLLLADNK LSGELPPAIG KLQQLSKVDM
501: SGNLISGELP PAIAGCRLLT FLDLSGNRLS GRIPAALASL RILNYLNLSS NALDGEIPPS IAGMQSLTAV DFSYNCLSGE VPATGQFAYF NSTSFAGNPG
601: LCGAFLSPCG GHGVATSTFG SLSSTTKLLL VLGLLALSII FAVAAVLKAR SLKRSAEARA WRITAFQRLD FAVDDVLDCL KDENVIGKGG SGIVYKGAMP
701: GGAVVAVKRL SAIGRSGSAH DDYGFSAEIQ TLGRIRHRHI VRLLGFAANR ETNLLVYEYM PNGSLGEVLH GKKGGHLQWA TRYKIAVEAA KGLCYLHHDC
801: SPPILHRDVK SNNILLDTDF EAHVADFGLA KFLNGNAGGS ECMSAIAGSY GYIAPEYAYT LKVDEKSDVY SFGVVLLELV TGRKPVGEFG DGVDIVQWVR
901: MATGSTKEGV MKIADPRLST VPVQELTHVF YVAMLCVAEQ SVERPTMREV VQILADMPGA TSMTAGTTRS EATVEGEEEE HQDGPQESPA QQDLLSI

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.