Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU0Hr1G022670.2 | |
| HORVU5Hr1G085130.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G75820.1 | HORVU0Hr1G022670.2 | AT1G75820.1 | 9294234 |
| AT1G75820.1 | HORVU5Hr1G085130.1 | AT1G75820.1 | 9294234 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G171600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 75.84 | 75.33 |
| KRH29398 | Soybean | cytosol | 43.4 | 30.7 |
| HORVU0Hr1G022670.2 | Barley | mitochondrion | 66.0 | 27.57 |
| GSMUA_Achr9P24170_001 | Banana | plasma membrane | 40.94 | 22.45 |
| CDX73202 | Canola | plasma membrane | 48.77 | 22.09 |
| AT1G75820.1 | Thale cress | plasma membrane | 46.53 | 21.22 |
| CDX87661 | Canola | plasma membrane | 45.41 | 21.04 |
| VIT_18s0001g14610.t01 | Wine grape | plasma membrane | 45.64 | 20.82 |
| Solyc04g081590.2.1 | Tomato | plasma membrane | 43.85 | 19.88 |
| KRH24413 | Soybean | plasma membrane | 43.62 | 19.76 |
| PGSC0003DMT400025747 | Potato | plasma membrane | 43.18 | 19.65 |
| HORVU4Hr1G015710.3 | Barley | plasma membrane | 44.07 | 19.24 |
| KRH29397 | Soybean | plasma membrane | 41.83 | 19.06 |
| HORVU2Hr1G061090.3 | Barley | plasma membrane, plastid | 40.94 | 18.96 |
| HORVU4Hr1G065620.1 | Barley | plasma membrane | 41.16 | 18.49 |
| HORVU5Hr1G098840.2 | Barley | cytosol, plasma membrane | 33.78 | 17.12 |
| HORVU1Hr1G095340.2 | Barley | plasma membrane | 39.82 | 16.71 |
| HORVU4Hr1G079040.1 | Barley | plasma membrane | 37.14 | 16.05 |
| HORVU7Hr1G072690.1 | Barley | plastid | 38.26 | 15.98 |
| Bra015812.1-P | Field mustard | cytosol | 25.95 | 15.26 |
| HORVU0Hr1G001770.1 | Barley | mitochondrion, plasma membrane, plastid | 34.23 | 15.25 |
| HORVU3Hr1G016360.2 | Barley | extracellular | 33.11 | 15.04 |
| HORVU6Hr1G005460.1 | Barley | plasma membrane | 34.45 | 14.91 |
| HORVU2Hr1G060110.2 | Barley | plasma membrane | 35.35 | 14.34 |
| HORVU7Hr1G085600.1 | Barley | plasma membrane | 32.21 | 13.38 |
| HORVU7Hr1G048140.2 | Barley | plasma membrane, plastid | 33.33 | 13.16 |
| HORVU1Hr1G025040.1 | Barley | plasma membrane | 32.66 | 13.06 |
| HORVU7Hr1G030370.10 | Barley | plasma membrane, plastid | 33.33 | 12.96 |
| HORVU5Hr1G071340.2 | Barley | plastid | 31.1 | 12.21 |
| HORVU7Hr1G041430.1 | Barley | plasma membrane | 28.86 | 11.57 |
| HORVU5Hr1G062120.3 | Barley | plastid | 29.31 | 11.07 |
| HORVU2Hr1G014840.9 | Barley | plasma membrane | 27.96 | 10.82 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287S373 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU5Hr1G085130 | EnsemblPlants:HORVU5Hr1G085130.1 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_4 | PFAM:PF00560 |
| PFAM:PF08263 | PFAM:PF12799 | PFAM:PF13516 | PRINTS:PR00019 | PANTHER:PTHR27000 | PANTHER:PTHR27000:SF231 |
| SUPFAM:SSF52047 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000B4656E4 | SEG:seg | : |
Description
No Description!
Coordinates
chrchr5H:+:574163142..574164671
Molecular Weight (calculated)
47739.0 Da
IEP (calculated)
6.777
GRAVY (calculated)
0.163
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: STLQSSLTPA PAGHCLAIMP PFVFIFIFIL LVLLSTSSSA SPERDVYALW KLKASVVPSN GSAALADWDP AAASPAHCSF SGVTCDTGAR VVAINITALP
101: LHGGTLPPEL ALLDALANLT IAACCLGGHV PASLHALPFL RHLNLSNNNL TGTLPSGPGP RYFQSLELLD VYNNNLSGPL PPFGPVHAGT LRYLHLGGNY
201: FSGKIPDDYG DVDQLEYLNL AANCLSGRVP ASLGRLKRLR EMYVGYYNKF DGGVPPEFGE LKALVVLDMS SCSLTGPIPP ELGRLKQLNK LYLFWNGLSG
301: DIPPALGELK HLEELDLSCN ELAGKIHASL ANLRKLKLLN LFGNYLHGAI PEFVAKLPNL EVLQIMDNNL AGHLPAGLGK NGRLKTLDVG DNYLTGLVPP
401: ALCTGGKLEK LWLMDNSFFG PIPESLGDCK TLRSVQLQNN FLSGPIP
101: LHGGTLPPEL ALLDALANLT IAACCLGGHV PASLHALPFL RHLNLSNNNL TGTLPSGPGP RYFQSLELLD VYNNNLSGPL PPFGPVHAGT LRYLHLGGNY
201: FSGKIPDDYG DVDQLEYLNL AANCLSGRVP ASLGRLKRLR EMYVGYYNKF DGGVPPEFGE LKALVVLDMS SCSLTGPIPP ELGRLKQLNK LYLFWNGLSG
301: DIPPALGELK HLEELDLSCN ELAGKIHASL ANLRKLKLLN LFGNYLHGAI PEFVAKLPNL EVLQIMDNNL AGHLPAGLGK NGRLKTLDVG DNYLTGLVPP
401: ALCTGGKLEK LWLMDNSFFG PIPESLGDCK TLRSVQLQNN FLSGPIP
001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF
Arabidopsis Description
CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.