Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G092300.1 | Wheat | plasma membrane | 72.05 | 63.99 |
| TraesCS3D01G092600.1 | Wheat | plasma membrane | 72.26 | 63.94 |
| TraesCS3B01G107600.1 | Wheat | plasma membrane | 72.26 | 63.88 |
| Os01t0170300-01 | Rice | extracellular | 64.84 | 57.12 |
| Zm00001d008715_P001 | Maize | plasma membrane | 62.7 | 55.29 |
| HORVU1Hr1G025040.1 | Barley | plasma membrane | 58.74 | 51.7 |
| EES02390 | Sorghum | plasma membrane, plastid | 64.74 | 48.51 |
| GSMUA_Achr3P20720_001 | Banana | plasma membrane | 38.01 | 43.09 |
| GSMUA_Achr10P... | Banana | plasma membrane | 41.67 | 42.36 |
| VIT_17s0000g08900.t01 | Wine grape | plasma membrane | 45.73 | 41.36 |
| PGSC0003DMT400046807 | Potato | plasma membrane | 46.34 | 41.19 |
| Solyc03g112580.2.1 | Tomato | plasma membrane | 45.83 | 40.81 |
| KRH03251 | Soybean | plasma membrane | 45.43 | 39.84 |
| KRH57106 | Soybean | plasma membrane | 44.21 | 39.4 |
| HORVU7Hr1G048140.2 | Barley | plasma membrane, plastid | 42.17 | 36.66 |
| HORVU5Hr1G071340.2 | Barley | plastid | 41.87 | 36.2 |
| HORVU0Hr1G001770.1 | Barley | mitochondrion, plasma membrane, plastid | 35.77 | 35.09 |
| HORVU5Hr1G085130.1 | Barley | endoplasmic reticulum, plasma membrane | 15.04 | 33.11 |
| HORVU7Hr1G085600.1 | Barley | plasma membrane | 33.94 | 31.04 |
| HORVU6Hr1G005460.1 | Barley | plasma membrane | 28.35 | 27.01 |
| HORVU2Hr1G060110.2 | Barley | plasma membrane | 30.18 | 26.95 |
| HORVU4Hr1G079040.1 | Barley | plasma membrane | 26.63 | 25.34 |
| HORVU2Hr1G061090.3 | Barley | plasma membrane, plastid | 24.29 | 24.77 |
| HORVU7Hr1G041430.1 | Barley | plasma membrane | 27.95 | 24.66 |
| HORVU4Hr1G015710.3 | Barley | plasma membrane | 25.2 | 24.22 |
| HORVU5Hr1G098840.2 | Barley | cytosol, plasma membrane | 21.14 | 23.58 |
| HORVU7Hr1G072690.1 | Barley | plastid | 25.41 | 23.36 |
| HORVU0Hr1G022670.2 | Barley | mitochondrion | 25.3 | 23.27 |
| HORVU7Hr1G030370.10 | Barley | plasma membrane, plastid | 27.03 | 23.13 |
| HORVU4Hr1G065620.1 | Barley | plasma membrane | 23.27 | 23.02 |
| HORVU2Hr1G014840.9 | Barley | plasma membrane | 26.73 | 22.77 |
| HORVU1Hr1G095340.2 | Barley | plasma membrane | 24.09 | 22.25 |
| HORVU5Hr1G062120.3 | Barley | plastid | 25.3 | 21.05 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A287K8S8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:HORVU3Hr1G016360 | EnsemblPlants:HORVU3Hr1G016360.2 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR27000 |
| PANTHER:PTHR27000:SF428 | SMART:SM00369 | SUPFAM:SSF52047 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI000B4755F2 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:39645726..39650313
Molecular Weight (calculated)
104378.0 Da
IEP (calculated)
11.718
GRAVY (calculated)
-0.234
Length
984 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPDMGGCRH VAAARLLLCC AVVVACMGGG ALAVDAQGAA LLAWKRALGG AGALGDWSPA DRSPCRWTGV SCNADGGVTE LSLQFVDLLG GVPDNLAAAV
101: GATLERLVLT GTNLTGPIPP QLGDLPALTH LDLSNNALTG PIPVSLCRPG SKLESLAVNS NHLEGAIPDA IGNLTALREL IFYDNQLEGA IPASIGKLAS
201: LEVIRGGGNK NLQGALPPEI GNCSNLTMLG LAETSISGPL PASLGQLKNL DTLAIYTALL SGPIPPELGK CGSLQNIYLY ENALSGSIPA QLGGLSNLKN
301: LLLWQNNLVG VIPPELGKCT GLNVIDLSMN GITGHIPASL GNLLALQELQ LSVNKMSGPI PAELARCTNL TDLELDNNQI SGTIPAEIGK LTALRMLYLW
401: ANQLTGTIPP EIGGCVSLES LDLSQNALTG PIPPSMFRLP KLSKLLLIDN VLSGEIPKEI GNCTSLVRFR ASGNHLAGAI PAQIGKLGHL SFLDLSSNRL
501: SGAIPAEIAG CRNLTFVDLH GNAITGVLPQ GLFQGMMSLQ YLDLSYNVIG GSLPSEVGML GSLTKLVLGG NRLSGQIPHE IGSCARLQLL DLGGNSLSGA
601: IPASIGKIAG LEIGLNLSCN GLSGAMPKEF AGLTRLGVLD VSHNQLSGDL QLLSALQNLV ALNVSFNNFS GPRAGDGVLR EAAHERRRGQ PGALPLPVPR
701: RRQRPRARST ARRSRRHGRS ALCSRGPPDR RGGRPTRPPA PRFDFRRCAA GRGQGRRDAA AVGRDAVPEA GDQRGRRDTQ PHAGERDRAR LVRRGVPRER
801: PVHRRRHRRE EVPVVRRRVR GGVRVRDRRA XPRAAPQHRA APGVGLQPPC AAPVLRLPPQ RHPRRPAARR RGRRPRGGVG AAAVDRRRRG RGPRVPAPRL
901: RAGDPPPRRQ GRQHPPRGAV RGVRRRLRPR QGRRRGRQLV APSVRRILRV HRPRVRMHDQ DHDQERRVQL RGGAAGDDHG AAAG
101: GATLERLVLT GTNLTGPIPP QLGDLPALTH LDLSNNALTG PIPVSLCRPG SKLESLAVNS NHLEGAIPDA IGNLTALREL IFYDNQLEGA IPASIGKLAS
201: LEVIRGGGNK NLQGALPPEI GNCSNLTMLG LAETSISGPL PASLGQLKNL DTLAIYTALL SGPIPPELGK CGSLQNIYLY ENALSGSIPA QLGGLSNLKN
301: LLLWQNNLVG VIPPELGKCT GLNVIDLSMN GITGHIPASL GNLLALQELQ LSVNKMSGPI PAELARCTNL TDLELDNNQI SGTIPAEIGK LTALRMLYLW
401: ANQLTGTIPP EIGGCVSLES LDLSQNALTG PIPPSMFRLP KLSKLLLIDN VLSGEIPKEI GNCTSLVRFR ASGNHLAGAI PAQIGKLGHL SFLDLSSNRL
501: SGAIPAEIAG CRNLTFVDLH GNAITGVLPQ GLFQGMMSLQ YLDLSYNVIG GSLPSEVGML GSLTKLVLGG NRLSGQIPHE IGSCARLQLL DLGGNSLSGA
601: IPASIGKIAG LEIGLNLSCN GLSGAMPKEF AGLTRLGVLD VSHNQLSGDL QLLSALQNLV ALNVSFNNFS GPRAGDGVLR EAAHERRRGQ PGALPLPVPR
701: RRQRPRARST ARRSRRHGRS ALCSRGPPDR RGGRPTRPPA PRFDFRRCAA GRGQGRRDAA AVGRDAVPEA GDQRGRRDTQ PHAGERDRAR LVRRGVPRER
801: PVHRRRHRRE EVPVVRRRVR GGVRVRDRRA XPRAAPQHRA APGVGLQPPC AAPVLRLPPQ RHPRRPAARR RGRRPRGGVG AAAVDRRRRG RGPRVPAPRL
901: RAGDPPPRRQ GRQHPPRGAV RGVRRRLRPR QGRRRGRQLV APSVRRILRV HRPRVRMHDQ DHDQERRVQL RGGAAGDDHG AAAG
0001: MSLHSLIFFS SSSSSLLFSF FFIFIFCFSL SDAEQNPEAS ILYSWLHSSS PTPSSLSLFN WNSIDNTPCN NWTFITCSSQ GFITDIDIES VPLQLSLPKN
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E
0101: LPAFRSLQKL TISGANLTGT LPESLGDCLG LKVLDLSSNG LVGDIPWSLS KLRNLETLIL NSNQLTGKIP PDISKCSKLK SLILFDNLLT GSIPTELGKL
0201: SGLEVIRIGG NKEISGQIPS EIGDCSNLTV LGLAETSVSG NLPSSLGKLK KLETLSIYTT MISGEIPSDL GNCSELVDLF LYENSLSGSI PREIGQLTKL
0301: EQLFLWQNSL VGGIPEEIGN CSNLKMIDLS LNLLSGSIPS SIGRLSFLEE FMISDNKFSG SIPTTISNCS SLVQLQLDKN QISGLIPSEL GTLTKLTLFF
0401: AWSNQLEGSI PPGLADCTDL QALDLSRNSL TGTIPSGLFM LRNLTKLLLI SNSLSGFIPQ EIGNCSSLVR LRLGFNRITG EIPSGIGSLK KINFLDFSSN
0501: RLHGKVPDEI GSCSELQMID LSNNSLEGSL PNPVSSLSGL QVLDVSANQF SGKIPASLGR LVSLNKLILS KNLFSGSIPT SLGMCSGLQL LDLGSNELSG
0601: EIPSELGDIE NLEIALNLSS NRLTGKIPSK IASLNKLSIL DLSHNMLEGD LAPLANIENL VSLNISYNSF SGYLPDNKLF RQLSPQDLEG NKKLCSSTQD
0701: SCFLTYRKGN GLGDDGDASR TRKLRLTLAL LITLTVVLMI LGAVAVIRAR RNIDNERDSE LGETYKWQFT PFQKLNFSVD QIIRCLVEPN VIGKGCSGVV
0801: YRADVDNGEV IAVKKLWPAM VNGGHDEKTK NVRDSFSAEV KTLGTIRHKN IVRFLGCCWN RNTRLLMYDY MPNGSLGSLL HERRGSSLDW DLRYRILLGA
0901: AQGLAYLHHD CLPPIVHRDI KANNILIGLD FEPYIADFGL AKLVDEGDIG RCSNTVAGSY GYIAPEYGYS MKITEKSDVY SYGVVVLEVL TGKQPIDPTV
1001: PEGIHLVDWV RQNRGSLEVL DSTLRSRTEA EADEMMQVLG TALLCVNSSP DERPTMKDVA AMLKEIKQER EEYAKVDLLL KKSPPPTTTM QEECRKNEMM
1101: MIPAAAASSS KEMRREERLL KSNNTSFSAS SLLYSSSSSI E
Arabidopsis Description
RCH2Receptor-like protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHP4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.