Factsheet for PGSC0003DMT400046807

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g112580.2.1	Tomato	plasma membrane	97.29	97.47
VIT_17s0000g08900.t01	Wine grape	plasma membrane	74.44	75.74
KRH03251	Soybean	plasma membrane	71.73	70.77
KRH57106	Soybean	plasma membrane	65.94	66.12
TraesCS3A01G092300.1	Wheat	plasma membrane	57.63	57.58
TraesCS3B01G107600.1	Wheat	plasma membrane	57.81	57.5
TraesCS3D01G092600.1	Wheat	plasma membrane	57.72	57.46
TraesCS1D01G115400.1	Wheat	plasma membrane	57.18	57.13
TraesCS1A01G113800.1	Wheat	plasma membrane	57.18	57.08
Os01t0170300-01	Rice	extracellular	57.54	57.03
GSMUA_Achr3P20720_001	Banana	plasma membrane	44.72	57.03
HORVU1Hr1G025040.1	Barley	plasma membrane	57.45	56.89
Zm00001d037672_P001	Maize	plasma membrane	56.82	56.46
TraesCS1B01G134100.1	Wheat	plasma membrane	56.73	56.17
EES17789	Sorghum	plasma membrane	57.18	56.02
Os05t0169600-01	Rice	cytosol	11.38	56.0
Zm00001d008715_P001	Maize	plasma membrane	56.28	55.82
PGSC0003DMT400057334	Potato	plasma membrane	53.75	54.94
GSMUA_Achr10P...	Banana	plasma membrane	47.43	54.24
EES02390	Sorghum	plasma membrane, plastid	57.81	48.74
PGSC0003DMT400040886	Potato	plasma membrane	47.52	46.59
HORVU3Hr1G016360.2	Barley	extracellular	41.19	46.34
PGSC0003DMT400063787	Potato	plasma membrane, plastid	43.9	46.15
PGSC0003DMT400076250	Potato	plasma membrane	48.06	43.25
PGSC0003DMT400064535	Potato	plasma membrane	41.46	42.19
PGSC0003DMT400059664	Potato	plasma membrane	40.92	42.02
PGSC0003DMT400076247	Potato	cytosol	6.14	39.31
PGSC0003DMT400043459	Potato	plasma membrane	36.59	36.92
PGSC0003DMT400030278	Potato	plasma membrane	36.49	36.46
PGSC0003DMT400079864	Potato	plasma membrane	36.31	36.25
PGSC0003DMT400010618	Potato	plasma membrane	32.7	35.77
PGSC0003DMT400025747	Potato	plasma membrane	31.71	35.74
PGSC0003DMT400016060	Potato	plasma membrane	30.98	35.73
PGSC0003DMT400022119	Potato	plasma membrane	33.06	35.6
PGSC0003DMT400043020	Potato	plasma membrane	32.7	35.42
PGSC0003DMT400078706	Potato	plasma membrane	32.25	35.1
PGSC0003DMT400048524	Potato	plasma membrane	31.98	34.88
PGSC0003DMT400064038	Potato	plasma membrane	31.35	34.73
PGSC0003DMT400018675	Potato	plasma membrane	31.89	34.68
PGSC0003DMT400023681	Potato	plasma membrane	33.33	33.42
PGSC0003DMT400030886	Potato	plasma membrane	27.55	31.8
PGSC0003DMT400008335	Potato	plasma membrane	32.07	31.5
PGSC0003DMT400059346	Potato	plasma membrane	34.69	30.6
PGSC0003DMT400008336	Potato	plasma membrane	30.8	30.58

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102600451	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1BJN1
PFAM:PF00069	PFAM:PF08263	PFAM:PF12799	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400018171	PGSC:PGSC0003DMG400018171
EnsemblPlants:PGSC0003DMT400046807	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294EC8F
RefSeq:XP_006344439.1	SEG:seg	:	:	:	:

Description

Receptor protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400018171]

Coordinates

chr3:+:52373676..52378435

Molecular Weight (calculated)

120312.0 Da

IEP (calculated)

6.037

GRAVY (calculated)

0.002

Length

1107 amino acids

Sequence
(BLAST)

0001: MPVYSWTLFF FFSFFLFTTS SALNPQGQAL LSWKTSLNGS LDVLSNWDPT DETPCGWFGL SCNFNKEVVE LELKYVDLLG IVPSNFSSLV SLNKLVLSGT
0101: NLTGVIPKEI GMLQGLKFLD LSDNALTGEI PSEIFHLPKL EQLHINSNRL VGSIPEDIGN LTSLVWLIFY DNQLSGGIPS SIGNLKRLEI IRGGGNKNLE
0201: GPLPQEIGNC SNLVMLGLAE TSISGFLPSS LGQLKRLETL AVYTSLLSGQ IPPELGDCSK LQNIYLYENS LTGSIPARLG NLKNLQNLLL WQNNLVGTIP
0301: PELGNCQQLQ VIDISMNSLT GSIPESFGRL NSMQELQLSV NQISGRIPAQ IGNCTGLTHI ELDNNEITGS IPSEFGNLSN LTLLFLWQNR LEGKIPSSIS
0401: SCHNLEAIDL SQNALTGSIP KEIFDLQKLN KLLLLSNNLS GPIPPEIGNC SSLIRLRAND NKLTGSLPPE IGKLKNLNFL DVGSNHLTGI IPPELSGCRN
0501: LTFLDLHSNS ISGNLPENLN QLGILQFIDV SDNLIEGTLS PSFGSLTSLT KLVLGKNRFS GPIPTQLGSC MKLQLIDLSG NQLSGEIPAS VGKIPGLEIA
0601: LNLSWNQLSG EIPAEFAALD KLGVLDLSHN QLSGDLHFLA DLQNLVVLNV SHNNLSGHVP DTSFFSKLPL SVLAGNPDLC FPGNQCSADK GGGVRRTKAA
0701: RVAMVVLLCA ACALLVAALY IILSGKIRNR KAHDYDLDGD NDVELGPPWE VTVYQKLDLS ITDVAKCLTV GNVLGRGRSG VVYKVNIPSG LTIAVKRFRA
0801: SDKHSMSAFS SEIATLARIR HRNIVRLLGW AANRKTKLLF YDYLPNGTLG SFLHEGFGGL IEWETRFKIA LGVAEGLAYL HHDCVPPILH RDVKAQNILL
0901: GDRYEPCLAD FGLARLMEEE NSSVTANPQF AGSYGYFAPE YACMLKITEK SDVFSFGVVL LEIITGKKPA DPSFPDGQHV IQWVRDHLKS KKDPVDVIDP
1001: RLQGHPDTQI QEMLQALGIA LLCTSNRAED RPTMKDVVAL LKEIIHEHAT GNEAKKTLNN SSKMSDTSSF SYSSSSVTPA QLLRLQGSFN CSLTHSSSSV
1101: SYSTSNQ

Best Arabidopsis Sequence Match ( AT4G26540.1 )
(BLAST)

0001: MPPNIYRLSF FSSLLCFFFI PCFSLDQQGQ ALLSWKSQLN ISGDAFSSWH VADTSPCNWV GVKCNRRGEV SEIQLKGMDL QGSLPVTSLR SLKSLTSLTL
0101: SSLNLTGVIP KEIGDFTELE LLDLSDNSLS GDIPVEIFRL KKLKTLSLNT NNLEGHIPME IGNLSGLVEL MLFDNKLSGE IPRSIGELKN LQVLRAGGNK
0201: NLRGELPWEI GNCENLVMLG LAETSLSGKL PASIGNLKRV QTIAIYTSLL SGPIPDEIGY CTELQNLYLY QNSISGSIPT TIGGLKKLQS LLLWQNNLVG
0301: KIPTELGNCP ELWLIDFSEN LLTGTIPRSF GKLENLQELQ LSVNQISGTI PEELTNCTKL THLEIDNNLI TGEIPSLMSN LRSLTMFFAW QNKLTGNIPQ
0401: SLSQCRELQA IDLSYNSLSG SIPKEIFGLR NLTKLLLLSN DLSGFIPPDI GNCTNLYRLR LNGNRLAGSI PSEIGNLKNL NFVDISENRL VGSIPPAISG
0501: CESLEFLDLH TNSLSGSLLG TTLPKSLKFI DFSDNALSST LPPGIGLLTE LTKLNLAKNR LSGEIPREIS TCRSLQLLNL GENDFSGEIP DELGQIPSLA
0601: ISLNLSCNRF VGEIPSRFSD LKNLGVLDVS HNQLTGNLNV LTDLQNLVSL NISYNDFSGD LPNTPFFRRL PLSDLASNRG LYISNAISTR PDPTTRNSSV
0701: VRLTILILVV VTAVLVLMAV YTLVRARAAG KQLLGEEIDS WEVTLYQKLD FSIDDIVKNL TSANVIGTGS SGVVYRITIP SGESLAVKKM WSKEESGAFN
0801: SEIKTLGSIR HRNIVRLLGW CSNRNLKLLF YDYLPNGSLS SRLHGAGKGG CVDWEARYDV VLGVAHALAY LHHDCLPTII HGDVKAMNVL LGPHFEPYLA
0901: DFGLARTISG YPNTGIDLAK PTNRPPMAGS YGYMAPEHAS MQRITEKSDV YSYGVVLLEV LTGKHPLDPD LPGGAHLVKW VRDHLAEKKD PSRLLDPRLD
1001: GRTDSIMHEM LQTLAVAFLC VSNKANERPL MKDVVAMLTE IRHIDVGRSE TEKIKAGGCG SKEPQQFMSN EKIINSHGSS NCSFAFSDDS V

Arabidopsis Description

RGI3LRR receptor-like serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:C0LGR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.