Factsheet for PGSC0003DMT400048524

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g093330.2.1	Tomato	vacuole	91.63	94.7
PGSC0003DMT400018675	Potato	plasma membrane	75.37	75.15
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	72.61	71.0
KRH23822	Soybean	plasma membrane	68.28	67.81
KRH39953	Soybean	plasma membrane	68.28	67.28
Bra012952.1-P	Field mustard	plasma membrane	63.35	63.29
CDY23065	Canola	plasma membrane	63.05	62.99
CDY02141	Canola	plasma membrane	55.27	62.96
AT5G61480.1	Thale cress	plasma membrane	62.86	61.29
GSMUA_Achr4P04790_001	Banana	plasma membrane	47.59	57.64
Zm00001d049588_P001	Maize	plasma membrane	49.46	49.12
EES13340	Sorghum	plastid	49.66	48.23
TraesCS7D01G302400.1	Wheat	plastid	50.94	48.14
HORVU7Hr1G072690.1	Barley	plastid	50.15	47.57
TraesCS7A01G305700.1	Wheat	plastid	50.25	47.53
TraesCS7B01G205900.1	Wheat	plastid	50.15	47.39
PGSC0003DMT400010618	Potato	plasma membrane	44.73	44.86
PGSC0003DMT400022119	Potato	plasma membrane	44.93	44.36
PGSC0003DMT400016060	Potato	plasma membrane	38.23	40.42
PGSC0003DMT400043020	Potato	plasma membrane	40.39	40.12
PGSC0003DMT400030886	Potato	plasma membrane	37.73	39.94
PGSC0003DMT400078706	Potato	plasma membrane	39.61	39.53
PGSC0003DMT400025747	Potato	plasma membrane	38.03	39.31
PGSC0003DMT400064038	Potato	plasma membrane	38.52	39.14
PGSC0003DMT400063787	Potato	plasma membrane, plastid	35.66	34.38
PGSC0003DMT400043459	Potato	plasma membrane	35.76	33.09
PGSC0003DMT400040886	Potato	plasma membrane	36.55	32.86
PGSC0003DMT400064535	Potato	plasma membrane	35.07	32.72
PGSC0003DMT400059664	Potato	plasma membrane	34.48	32.47
PGSC0003DMT400030278	Potato	plasma membrane	35.17	32.22
PGSC0003DMT400046807	Potato	plasma membrane	34.88	31.98
PGSC0003DMT400079864	Potato	plasma membrane	34.68	31.74
PGSC0003DMT400057334	Potato	plasma membrane	33.1	31.02
PGSC0003DMT400076250	Potato	plasma membrane	36.06	29.76
PGSC0003DMT400023681	Potato	plasma membrane	32.12	29.53
PGSC0003DMT400008336	Potato	plasma membrane	31.63	28.79
PGSC0003DMT400008335	Potato	plasma membrane	31.03	27.95
PGSC0003DMT400076247	Potato	cytosol	4.43	26.01
PGSC0003DMT400059346	Potato	plasma membrane	32.12	25.98

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102593180	MapMan:11.10.1.9.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1BMJ2	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400018849	PGSC:PGSC0003DMG400018849	EnsemblPlants:PGSC0003DMT400048524
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI000295BCF2	RefSeq:XP_006358242.1	SEG:seg	:	:

Description

Leucine-rich repeat receptor kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400018849]

Coordinates

chr3:+:38519816..38524112

Molecular Weight (calculated)

111634.0 Da

IEP (calculated)

6.913

GRAVY (calculated)

0.010

Length

1015 amino acids

Sequence
(BLAST)

0001: MRHLFPFFFT TVFFFLTRIS LVFSITNLPL QLISLLTLKS SLHDHHNTFN DWDPTLAFAR PGSHIWCSWS GIKCDKKTNQ ITSLDLSKRN LSGTIPEDIR
0101: NLVHLHHLNL SGNALEGPLQ TVIFELPFLK TLDISHNLFN STFPSGVSRL KSLTYLNAYS NDFVGPLPEE VAQIPNLEYL NFGGNYFKGV IPKSYGGLAK
0201: LKFLHLAGNL LNGPVLPELG FLKQLEHVEI GYQNFTGVVP AEFSSLSNLN YLDISLANLS GNLPVGLGNL TNLETLLLFK NHFYGTIPLF FARLTSLKSL
0301: DLSDNHLSGT IPEGFSGFKE LTVLNLMNNN LTGEIPQGIG ELPNLELLAL WNNSLTGILP QKLGSNAKLQ KLDVSSNYLS GPIPPNLCLS NSLVKLILFS
0401: NQFIGEIPSS LANCTALFRF RIQNNRLNGS IPLGFGILPN LAYWDLSKNN FTGPIPEDLG NTATLAYLNI SENPFNSELP ESIWSSPSLQ IFSASYSGLV
0501: GKIPNFKGCK AFYRIELEGN NLTGSIPWDI EHCEKLICMN FRRNSLTGII PWEISAIPSL TEVDLSHNFL TGTIPSNFAN STTIENFNVS YNQLTGPVPS
0601: SGSIFSSLHS SSFIGNEGLC GTVIQKPCGT DGLAAGAAEI KPQPKKTAGA IVWIMAAAFG IGLFVLIAGS RCFHAKYSQR FSVEREVGPW KLTAFQRLNF
0701: TADDVLESLT MTDKILGMGS TGTVYKAEMP GGETIAVKKL WGKQKETIRK RRGVLAEVDV LGNVRHRNIV RLFGCCSNNE CTMLLYEYMP NGSLDDLLHG
0801: KNKDANLVAD WLTRYKIALG VAHGICYLHH DCDPVIVHRD LKPSNILLDG DLEARVADFG VAKLIQCDES MSVIAGSYGY IAPEYAYTLQ VDEKSDIYSY
0901: GVVLLEILSG KRSVEPEFGD GNSIVDWVKS KIKTKNGIND VLDKNAGASC LSVREEMMLL LRVALLCTSR NPADRPSMRD VISMLQEAKP KRKLPETGDN
1001: AIAAIPLAQK ANVEC

Best Arabidopsis Sequence Match ( AT5G61480.1 )
(BLAST)

0001: MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV NGQNDAVWCS WSGVVCDNVT AQVISLDLSH RNLSGRIPIQ
0101: IRYLSSLLYL NLSGNSLEGS FPTSIFDLTK LTTLDISRNS FDSSFPPGIS KLKFLKVFNA FSNNFEGLLP SDVSRLRFLE ELNFGGSYFE GEIPAAYGGL
0201: QRLKFIHLAG NVLGGKLPPR LGLLTELQHM EIGYNHFNGN IPSEFALLSN LKYFDVSNCS LSGSLPQELG NLSNLETLFL FQNGFTGEIP ESYSNLKSLK
0301: LLDFSSNQLS GSIPSGFSTL KNLTWLSLIS NNLSGEVPEG IGELPELTTL FLWNNNFTGV LPHKLGSNGK LETMDVSNNS FTGTIPSSLC HGNKLYKLIL
0401: FSNMFEGELP KSLTRCESLW RFRSQNNRLN GTIPIGFGSL RNLTFVDLSN NRFTDQIPAD FATAPVLQYL NLSTNFFHRK LPENIWKAPN LQIFSASFSN
0501: LIGEIPNYVG CKSFYRIELQ GNSLNGTIPW DIGHCEKLLC LNLSQNHLNG IIPWEISTLP SIADVDLSHN LLTGTIPSDF GSSKTITTFN VSYNQLIGPI
0601: PSGSFAHLNP SFFSSNEGLC GDLVGKPCNS DRFNAGNADI DGHHKEERPK KTAGAIVWIL AAAIGVGFFV LVAATRCFQK SYGNRVDGGG RNGGDIGPWK
0701: LTAFQRLNFT ADDVVECLSK TDNILGMGST GTVYKAEMPN GEIIAVKKLW GKNKENGKIR RRKSGVLAEV DVLGNVRHRN IVRLLGCCTN RDCTMLLYEY
0801: MPNGSLDDLL HGGDKTMTAA AEWTALYQIA IGVAQGICYL HHDCDPVIVH RDLKPSNILL DADFEARVAD FGVAKLIQTD ESMSVVAGSY GYIAPEYAYT
0901: LQVDKKSDIY SYGVILLEII TGKRSVEPEF GEGNSIVDWV RSKLKTKEDV EEVLDKSMGR SCSLIREEMK QMLRIALLCT SRSPTDRPPM RDVLLILQEA
1001: KPKRKTVGDN VIVVGDVNDV NFEDVCSVDV GHDVKCQRIG V

Arabidopsis Description

TDRLeucine-rich repeat receptor-like protein kinase TDR [Source:UniProtKB/Swiss-Prot;Acc:Q9FII5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.