Factsheet for PGSC0003DMT400016060

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g080770.2.1	Tomato	plasma membrane	97.29	97.29
VIT_01s0010g00330.t01	Wine grape	plasma membrane	71.98	69.94
KRG99047	Soybean	plasma membrane	70.0	68.09
KRH45951	Soybean	plasma membrane	70.1	67.71
KRH14558	Soybean	plasma membrane	69.48	67.65
KRH73570	Soybean	plasma membrane	69.48	66.77
Bra020928.1-P	Field mustard	cytosol, plasma membrane, plastid	57.5	65.4
Bra038810.1-P	Field mustard	cytosol, nucleus, plasma membrane	57.29	65.17
CDX98665	Canola	cytosol, nucleus, plasma membrane	57.29	65.17
CDY54567	Canola	cytosol, plasma membrane, plastid	57.19	65.05
CDY31445	Canola	cytosol, plasma membrane, plastid	57.08	64.93
CDX93999	Canola	cytosol, nucleus, plasma membrane	56.77	64.57
GSMUA_Achr6P22870_001	Banana	plasma membrane	46.98	63.52
GSMUA_Achr8P27460_001	Banana	plasma membrane	49.9	62.61
Bra013451.1-P	Field mustard	plasma membrane	62.29	61.9
AT4G20270.1	Thale cress	plasma membrane	63.54	61.49
CDY62258	Canola	plasma membrane	55.0	60.62
CDY66353	Canola	plasma membrane	53.85	60.19
GSMUA_Achr9P00190_001	Banana	plasma membrane	48.33	60.1
PGSC0003DMT400064038	Potato	plasma membrane	58.85	56.56
Zm00001d039218_P002	Maize	plasma membrane	53.75	51.65
PGSC0003DMT400043020	Potato	plasma membrane	54.69	51.37
PGSC0003DMT400078706	Potato	plasma membrane	53.96	50.93
EES20075	Sorghum	plasma membrane	55.1	50.38
Os05t0595800-00	Rice	plasma membrane	45.1	48.98
TraesCS1B01G479300.1	Wheat	plasma membrane	53.65	48.68
TraesCS1D01G452700.1	Wheat	plasma membrane	53.85	48.5
TraesCS1A01G444500.1	Wheat	plasma membrane	53.65	48.31
PGSC0003DMT400025747	Potato	plasma membrane	46.67	45.62
HORVU1Hr1G095340.2	Barley	plasma membrane	47.81	43.1
PGSC0003DMT400048524	Potato	plasma membrane	40.42	38.23
PGSC0003DMT400018675	Potato	plasma membrane	40.31	38.02
PGSC0003DMT400022119	Potato	plasma membrane	40.62	37.94
PGSC0003DMT400010618	Potato	plasma membrane	39.69	37.65
PGSC0003DMT400064535	Potato	plasma membrane	38.23	33.73
PGSC0003DMT400059664	Potato	plasma membrane	37.4	33.3
PGSC0003DMT400030886	Potato	plasma membrane	33.12	33.16
PGSC0003DMT400079864	Potato	plasma membrane	38.23	33.09
PGSC0003DMT400063787	Potato	plasma membrane, plastid	36.04	32.86
PGSC0003DMT400043459	Potato	plasma membrane	37.4	32.73
PGSC0003DMT400030278	Potato	plasma membrane	37.6	32.58
PGSC0003DMT400046807	Potato	plasma membrane	35.73	30.98
PGSC0003DMT400040886	Potato	plasma membrane	36.35	30.91
PGSC0003DMT400023681	Potato	plasma membrane	33.65	29.26
PGSC0003DMT400057334	Potato	plasma membrane	32.29	28.62
PGSC0003DMT400076250	Potato	plasma membrane	36.04	28.13
PGSC0003DMT400059346	Potato	plasma membrane	34.79	26.61
PGSC0003DMT400008336	Potato	plasma membrane	30.52	26.28
PGSC0003DMT400008335	Potato	plasma membrane	30.21	25.73
PGSC0003DMT400076247	Potato	cytosol	3.85	21.39

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102585300	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1A707	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263
PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400006280	PGSC:PGSC0003DMG400006280	EnsemblPlants:PGSC0003DMT400016060	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27000	PANTHER:PTHR27000:SF121	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029666B7	RefSeq:XP_006356981.1
SEG:seg	:	:	:	:	:

Description

Receptor protein kinase CLAVATA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400006280]

Coordinates

chr1:+:60411324..60414692

Molecular Weight (calculated)

105918.0 Da

IEP (calculated)

7.505

GRAVY (calculated)

-0.031

Length

960 amino acids

Sequence
(BLAST)

001: MATSNTSLFF FAYFLLVFLI TPSQSRNVSL RRQAKTLVSL KQAFVVSSVP STLSTWNMSN YMSICCWTGI TCDDTKSVTT IDISNLNISG SLSPDIHELT
101: RLRVLNISNN LLGGNLSWEY RKFNVLQVLD AYNNNFTGPL PLGVTQLLQL KYLNFGGNYF SGKIPLSYGS FNQLEFLSLA GNDLHGPIPR ELGNVTSLRW
201: LQLGYYNQFD EGIPPELGKL VNLVHLDLSS CNLTGSIPAE LGNLNMLDTL FLQKNQLTGV FPPQLGNLTR LKSLDISVNE LTGEIPVDLS GLKELTLLNL
301: FINNLHGEIP GCIAELPKLE MLNLWRNNFT GSIPSKLGMN GKLVEIDLSS NRLTGLIPKS LCFGRNLKIL ILLDNFLFGP LPDDFGQCRT LSRVRMGQNY
401: LSGSIPTGFL YLPELSLVEL QNNYISGQLS NEKTSASSKL EGLNLSNNRL SGALPSAIGN YSGLKNLVLT GNGFSGDIPS DIGRLKSILK LDLSRNNFSG
501: TIPPQIGNCL SLTYLDLSQN QLSGPIPVQI AQIHILNYIN ISWNHFNDSL PAEIGSMKSL TSADFSHNNL SGSIPETGQY LYFNSTSFIG NPYLSGSDST
601: PSNITSNSPS KLGDGSDNRT KVPTIYKFIF AFGLLFCSLI FVVLAIIKTR KGSKNSNLWK LTAFQKLEFG SEDVLQCLKD NNVIGRGGAG IVYKGTMPNG
701: DHVAVKKLGI SKGSHDNGLS AELKTLGKIR HRYIVRLLAF CSNKEINLLV YEYMLNGSLG EVLHGKNGGQ LQWDTRLKIA IEAAKGLSYL HHDCSPMIIH
801: RDVKSNNILL NSELEAHVAD FGLAKYFHNN GTSECMSAIA GSYGYIAPEY AYTLKIDEKS DVYSFGVVLL ELITGRRPVG NFGEEGMDIV QWAKTETNWS
901: KEEVVKILDE RLKNVAIVEA MQVFFVAMLC VEEYSIERPT MREVVQMLSQ AKQPNTFQIQ

Best Arabidopsis Sequence Match ( AT4G20270.1 )
(BLAST)

001: MADKIFTFFL ILSSISPLLC SSLISPLNLS LIRQANVLIS LKQSFDSYDP SLDSWNIPNF NSLCSWTGVS CDNLNQSITR LDLSNLNISG TISPEISRLS
101: PSLVFLDISS NSFSGELPKE IYELSGLEVL NISSNVFEGE LETRGFSQMT QLVTLDAYDN SFNGSLPLSL TTLTRLEHLD LGGNYFDGEI PRSYGSFLSL
201: KFLSLSGNDL RGRIPNELAN ITTLVQLYLG YYNDYRGGIP ADFGRLINLV HLDLANCSLK GSIPAELGNL KNLEVLFLQT NELTGSVPRE LGNMTSLKTL
301: DLSNNFLEGE IPLELSGLQK LQLFNLFFNR LHGEIPEFVS ELPDLQILKL WHNNFTGKIP SKLGSNGNLI EIDLSTNKLT GLIPESLCFG RRLKILILFN
401: NFLFGPLPED LGQCEPLWRF RLGQNFLTSK LPKGLIYLPN LSLLELQNNF LTGEIPEEEA GNAQFSSLTQ INLSNNRLSG PIPGSIRNLR SLQILLLGAN
501: RLSGQIPGEI GSLKSLLKID MSRNNFSGKF PPEFGDCMSL TYLDLSHNQI SGQIPVQISQ IRILNYLNVS WNSFNQSLPN ELGYMKSLTS ADFSHNNFSG
601: SVPTSGQFSY FNNTSFLGNP FLCGFSSNPC NGSQNQSQSQ LLNQNNARSR GEISAKFKLF FGLGLLGFFL VFVVLAVVKN RRMRKNNPNL WKLIGFQKLG
701: FRSEHILECV KENHVIGKGG RGIVYKGVMP NGEEVAVKKL LTITKGSSHD NGLAAEIQTL GRIRHRNIVR LLAFCSNKDV NLLVYEYMPN GSLGEVLHGK
801: AGVFLKWETR LQIALEAAKG LCYLHHDCSP LIIHRDVKSN NILLGPEFEA HVADFGLAKF MMQDNGASEC MSSIAGSYGY IAPEYAYTLR IDEKSDVYSF
901: GVVLLELITG RKPVDNFGEE GIDIVQWSKI QTNCNRQGVV KIIDQRLSNI PLAEAMELFF VAMLCVQEHS VERPTMREVV QMISQAKQPN TF

Arabidopsis Description

BAM3Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Source:UniProtKB/Swiss-Prot;Acc:O65440]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.