Factsheet for PGSC0003DMT400064038

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 7
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g103530.2.1	Tomato	plasma membrane	96.6	96.98
VIT_12s0035g00990.t01	Wine grape	plasma membrane	74.77	76.54
GSMUA_Achr5P16960_001	Banana	plasma membrane	49.35	64.36
GSMUA_Achr3P16610_001	Banana	plasma membrane	45.55	59.4
PGSC0003DMT400016060	Potato	plasma membrane	56.56	58.85
TraesCS4D01G088400.1	Wheat	plasma membrane	58.36	57.16
HORVU4Hr1G015710.3	Barley	plasma membrane	58.56	57.13
GSMUA_Achr6P07350_001	Banana	plasma membrane	39.04	57.02
TraesCS4B01G091400.1	Wheat	plasma membrane	58.46	56.92
TraesCS4A01G224800.1	Wheat	plasma membrane	58.16	56.79
GSMUA_Achr8P29350_001	Banana	plasma membrane	39.04	55.95
Os11t0233800-01	Rice	plasma membrane	58.56	55.14
Zm00001d007254_P001	Maize	plasma membrane	56.66	54.69
Zm00001d048968_P001	Maize	plasma membrane	56.86	54.56
PGSC0003DMT400043020	Potato	plasma membrane	54.85	53.62
PGSC0003DMT400078706	Potato	plasma membrane	53.85	52.9
OQU83191	Sorghum	plasma membrane	56.56	52.61
PGSC0003DMT400025747	Potato	plasma membrane	48.55	49.39
PGSC0003DMT400018675	Potato	plasma membrane	39.54	38.8
PGSC0003DMT400048524	Potato	plasma membrane	39.14	38.52
PGSC0003DMT400010618	Potato	plasma membrane	38.44	37.94
PGSC0003DMT400022119	Potato	plasma membrane	38.94	37.84
PGSC0003DMT400030278	Potato	plasma membrane	38.64	34.84
PGSC0003DMT400064535	Potato	plasma membrane	37.94	34.83
PGSC0003DMT400059664	Potato	plasma membrane	37.04	34.32
PGSC0003DMT400079864	Potato	plasma membrane	37.64	33.9
PGSC0003DMT400043459	Potato	plasma membrane	36.94	33.64
PGSC0003DMT400040886	Potato	plasma membrane	36.84	32.6
PGSC0003DMT400030886	Potato	plasma membrane	31.13	32.43
PGSC0003DMT400063787	Potato	plasma membrane, plastid	33.93	32.19
PGSC0003DMT400046807	Potato	plasma membrane	34.73	31.35
PGSC0003DMT400057334	Potato	plasma membrane	33.73	31.12
PGSC0003DMT400023681	Potato	plasma membrane	32.73	29.62
PGSC0003DMT400076250	Potato	plasma membrane	35.54	28.86
PGSC0003DMT400008336	Potato	plasma membrane	31.63	28.34
PGSC0003DMT400008335	Potato	plasma membrane	31.23	27.68
PGSC0003DMT400059346	Potato	plasma membrane	34.33	27.33
PGSC0003DMT400076247	Potato	cytosol	3.6	20.81

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102590655	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CBM6	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	EnsemblPlantsGene:PGSC0003DMG400024890
PGSC:PGSC0003DMG400024890	EnsemblPlants:PGSC0003DMT400064038	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF326
InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002953309	RefSeq:XP_006349327.1
SEG:seg	:	:	:	:	:

Description

Receptor protein kinase CLAVATA1 [Source:PGSC_GENE;Acc:PGSC0003DMG400024890]

Coordinates

chr1:+:80227909..80232451

Molecular Weight (calculated)

109944.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

0.007

Length

999 amino acids

Sequence
(BLAST)

001: MLPLILVTLF TLVCTSISSS SSSISTDFHA LLSLKKGFDF SNSVLSSWDS SNPSSVCSWM GIKCLQDRVV SINLSNMELY GSVSPAISRL DKLVELSIDG
101: NNFTGEIKIE NMRSLESLNI SNNMFSGSLD WNYTSLANLE VLDAYNNNFS SFLPVGVVSL EKLKYLDLGG NYFYGRIPES YGDLIGLEYL QLAGNDLHGR
201: IPRALGNLTN LKEIYLGYFN VFVGGIPKEF GKLENLVHMD ISNCELDGPI PPELGNLKLL NTLFLHINLL SGPIPKELGN LTGLVNLDLS ANALTGEIPF
301: ELINLQQLRL FNLFMNKLHG SIPDFIADYP DLKILGLWMN NFTGIIPEKL GQNEKLQELD LSSNKLTGTI PKHLCASKQL IILILLKNFL FGSIPEDLGT
401: CLSLVRVRLG QNYLNGSIPN GFIYMPDLNL VELQNNYLSG TLSENGDTSS KPAKLGQLNL SNNQLSGSLP FSLSNFSSLQ ILSLGGNQFS GPIPTSIGQL
501: SQALKIDLSQ NFLSGEIPPE IGNCVHLTYL DLSQNNFSGS IPPRVSEIRI LNYLNLSRNH LNETIPKSIG TMRSLTTADF SFNDLSGKLP ESGQFAYFNA
601: TSFAGNPQLC GSLLNNPCNF TLITDPPGKS HGDFKLIFAL GLLICSLVFA AAAIIKAKSF KKTGADSWKM TAFQKVEFSV VNVLECVKDG NVIGRGGAGI
701: VYHGKMPNGV EIAVKKLLGF GNNSHDHGFK AEIRTLGNIR HRNIVRLVAF CSNKETNLLV YEYMRNGSLG EALHGKKGGF LSWNLRYKIA IEAAKGLCYL
801: HHDCSPLIVH RDVKSNNILL NSNFEAHVAD FGLAKFLVDG GASECMSAVA GSYGYIAPEY AYTLRVDEKS DVYSFGVVLL ELITGRRPVG EFGDGVDIVQ
901: WSKKVTNCKR EQVTHIVDPR LTTVPEDEAM HLFFISMLCI QENSVERPTM REVIQMLSEF PRQSSEYNQP SSSKVVLQKL KSLENDQTTC PKIRKELLV

Best Arabidopsis Sequence Match ( AT4G20270.1 )
(BLAST)

001: MADKIFTFFL ILSSISPLLC SSLISPLNLS LIRQANVLIS LKQSFDSYDP SLDSWNIPNF NSLCSWTGVS CDNLNQSITR LDLSNLNISG TISPEISRLS
101: PSLVFLDISS NSFSGELPKE IYELSGLEVL NISSNVFEGE LETRGFSQMT QLVTLDAYDN SFNGSLPLSL TTLTRLEHLD LGGNYFDGEI PRSYGSFLSL
201: KFLSLSGNDL RGRIPNELAN ITTLVQLYLG YYNDYRGGIP ADFGRLINLV HLDLANCSLK GSIPAELGNL KNLEVLFLQT NELTGSVPRE LGNMTSLKTL
301: DLSNNFLEGE IPLELSGLQK LQLFNLFFNR LHGEIPEFVS ELPDLQILKL WHNNFTGKIP SKLGSNGNLI EIDLSTNKLT GLIPESLCFG RRLKILILFN
401: NFLFGPLPED LGQCEPLWRF RLGQNFLTSK LPKGLIYLPN LSLLELQNNF LTGEIPEEEA GNAQFSSLTQ INLSNNRLSG PIPGSIRNLR SLQILLLGAN
501: RLSGQIPGEI GSLKSLLKID MSRNNFSGKF PPEFGDCMSL TYLDLSHNQI SGQIPVQISQ IRILNYLNVS WNSFNQSLPN ELGYMKSLTS ADFSHNNFSG
601: SVPTSGQFSY FNNTSFLGNP FLCGFSSNPC NGSQNQSQSQ LLNQNNARSR GEISAKFKLF FGLGLLGFFL VFVVLAVVKN RRMRKNNPNL WKLIGFQKLG
701: FRSEHILECV KENHVIGKGG RGIVYKGVMP NGEEVAVKKL LTITKGSSHD NGLAAEIQTL GRIRHRNIVR LLAFCSNKDV NLLVYEYMPN GSLGEVLHGK
801: AGVFLKWETR LQIALEAAKG LCYLHHDCSP LIIHRDVKSN NILLGPEFEA HVADFGLAKF MMQDNGASEC MSSIAGSYGY IAPEYAYTLR IDEKSDVYSF
901: GVVLLELITG RKPVDNFGEE GIDIVQWSKI QTNCNRQGVV KIIDQRLSNI PLAEAMELFF VAMLCVQEHS VERPTMREVV QMISQAKQPN TF

Arabidopsis Description

BAM3Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Source:UniProtKB/Swiss-Prot;Acc:O65440]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.