Factsheet for TraesCS4D01G088400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G091400.1	Wheat	plasma membrane	97.75	97.17
TraesCS4A01G224800.1	Wheat	plasma membrane	96.18	95.89
HORVU4Hr1G015710.3	Barley	plasma membrane	95.78	95.41
Os11t0233800-01	Rice	plasma membrane	83.43	80.21
Zm00001d007254_P001	Maize	plasma membrane	79.02	77.87
Zm00001d048968_P001	Maize	plasma membrane	78.04	76.46
OQU83191	Sorghum	plasma membrane	78.82	74.86
GSMUA_Achr5P16960_001	Banana	plasma membrane	50.69	67.49
GSMUA_Achr3P16610_001	Banana	plasma membrane	47.55	63.32
VIT_12s0035g00990.t01	Wine grape	plasma membrane	57.84	60.45
GSMUA_Achr6P07350_001	Banana	plasma membrane	40.2	59.94
GSMUA_Achr8P29350_001	Banana	plasma membrane	40.29	58.97
PGSC0003DMT400064038	Potato	plasma membrane	57.16	58.36
Solyc01g103530.2.1	Tomato	plasma membrane	56.86	58.29
TraesCS5D01G417400.1	Wheat	plasma membrane	53.24	52.46
TraesCS4D01G235800.1	Wheat	plasma membrane	51.27	52.46
TraesCS2D01G255900.1	Wheat	plastid	53.53	51.27
TraesCS1D01G452700.1	Wheat	plasma membrane	52.65	50.38
TraesCS7D01G521200.1	Wheat	plasma membrane	46.37	42.77
TraesCS4D01G307500.1	Wheat	plasma membrane	40.1	39.56
TraesCS5D01G517500.1	Wheat	plasma membrane, vacuole	27.65	38.32
TraesCS6D01G033300.1	Wheat	plasma membrane	37.94	37.61
TraesCS2D01G252000.1	Wheat	plasma membrane	37.55	34.72
TraesCS7D01G354700.1	Wheat	plasma membrane	36.37	34.71
TraesCS7D01G302400.1	Wheat	plastid	35.59	33.8
TraesCS4D01G005000.1	Wheat	plasma membrane	35.2	33.52
TraesCS2D01G359100.1	Wheat	plasma membrane	36.18	33.39
TraesCS5D01G262400.1	Wheat	plasma membrane	35.29	32.88
TraesCS7D01G234800.2	Wheat	plasma membrane	35.2	32.73
TraesCS1D01G115400.1	Wheat	plasma membrane	35.49	32.67
TraesCS2D01G013700.1	Wheat	plasma membrane	36.86	32.5
TraesCS3D01G092600.1	Wheat	plasma membrane	34.41	31.56
TraesCS3D01G534900.1	Wheat	plasma membrane	30.59	30.86
TraesCS7D01G206800.1	Wheat	plasma membrane	31.86	29.17
TraesCS2D01G088000.1	Wheat	plasma membrane	32.84	29.16
TraesCS7D01G150200.2	Wheat	plasma membrane	31.57	28.7
TraesCS5D01G218500.1	Wheat	plasma membrane	31.57	28.1
TraesCS2D01G233800.1	Wheat	plasma membrane	33.92	27.35
TraesCS2D01G359000.1	Wheat	endoplasmic reticulum, golgi	0.59	1.26

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF326	InterPro:Prot_kinase_dom	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4D01G088400
EnsemblPlants:TraesCS4D01G088400.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:63585029..63590247

Molecular Weight (calculated)

108161.0 Da

IEP (calculated)

6.429

GRAVY (calculated)

0.123

Length

1020 amino acids

Sequence
(BLAST)

0001: MKALHPFALL PFLIFLLLST DNASGYGHGE ALHGDALALL SLKASLSCRP HVLRSWLPGN VASVCEWTGV RCAGGRVVSV DIANMNVSTG APVTAEVTGF
0101: AALANLSLAG NGIVGAVVVS ALPELRYVNV SGNQLGGGLD GWDFPSLPSL EVFDAYDNNF SSSLPPGVTA LARLRYLDLG GNYFSGVIPA SYGGMLALEY
0201: LSLNGNNLQG AIPPELGNLT SLRELYLGYY NAFDGGIPAE LGRLRNLTML DVSNCGLTGS IPSELGGLAS LDTLFLHTNQ LTGEIPPELG HLTALTRLDL
0301: SNNALTGEVP STLASLTSLR LLNLFLNRLH GPVPDFVAAL PLLETLQLFM NNFTGRVPAG LGANAALRLV DLSSNRLTGM IPEMLCSSGE LHTAILMNNF
0401: LFGPIPGPLG SCASLTRVRF GHNYLNGTIP AGFLYLPRLN LLELQNNLLS GPVPSNPSPT LAGSQLAQLN LSNNLLSGPL PAALANLSAL QTLLVSNNRL
0501: AGAVPPEVGE LRLLVKLDLS GNELSGPIPE AIGRCGQLTY IDLSTNNLSG PIPEAIAGIR VLNYLNLSRN QLEESIPAAI GAMSSLTAAD FSYNDLSGQL
0601: PDTGQLRYLN ETAFAGNPRL CGPVLNRPCN ISSDTGGSTA VSPRRATAGD YKLVFALGLL ACSVVFAVAA VLRARSYRGG PDGAWRFTAF HKVDFGIAEV
0701: IECMKDGNVV GRGGAGVVYA GRARSGGAIA VKRLNGGGRH DHGFRAEIRT LGSIRHRNIV RLLAFCTNDR EANVLVYEYM GGGSLGEVLH GKGGGFLAWD
0801: RRYRIALEAA RGLCYLHHDC SPMIVHRDVK SNNILLGDDL EAHVADFGLA KFLRSGSGGG AANAGASECM SAVAGSYGYI APEYAYTLRV DEKSDVYSFG
0901: VVLLELVTGR RPVGDFGEGV DIVQWAKRVT DGRRESVPKV VDRRLSTVPM DEVSHLFFVS MLCVQENSVE RPTMREVVQM LSEFPRHASS QPSPSSASSS
1001: SAPEPEKEPN CYKLFPDLLN

Best Arabidopsis Sequence Match ( AT1G75820.1 )
(BLAST)

001: MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT
101: LAANNFTGEL PLEMKSLTSL KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF SGEIPESYGD IQSLEYLGLN
201: GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ
301: LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP
401: IPEELGKCKS LTKIRIVKNL LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP NLQTLFLDRN RFRGNIPREI
501: FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV
601: FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK
701: GGAGIVYRGS MPNNVDVAIK RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG SKGGHLQWET RHRVAVEAAK
801: GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG
901: VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM REVVHMLTNP PKSVANLIAF

Arabidopsis Description

CLV1Leucine-rich repeat receptor-like protein kinase (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0LGJ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.