Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040886 | Potato | plasma membrane | 96.37 | 96.28 |
| VIT_07s0005g05420.t01 | Wine grape | plasma membrane | 62.59 | 72.26 |
| CDY56672 | Canola | cytosol | 50.89 | 68.82 |
| CDY19929 | Canola | cytosol | 50.89 | 68.74 |
| KRG99860 | Soybean | plasma membrane | 67.91 | 66.72 |
| Bra036154.1-P | Field mustard | plasma membrane | 66.31 | 66.37 |
| KRH46804 | Soybean | plasma membrane | 67.82 | 66.35 |
| Solyc09g091400.2.1 | Tomato | plasma membrane | 66.13 | 66.19 |
| AT5G48940.1 | Thale cress | plasma membrane | 66.22 | 65.81 |
| GSMUA_Achr8P12880_001 | Banana | plasma membrane | 36.79 | 59.54 |
| Os04t0132500-01 | Rice | plasma membrane | 57.98 | 57.02 |
| TraesCS2A01G012900.1 | Wheat | plasma membrane | 57.98 | 56.04 |
| TraesCS2D01G013700.1 | Wheat | plasma membrane | 57.36 | 55.92 |
| TraesCS2B01G005000.1 | Wheat | plasma membrane | 57.71 | 55.88 |
| EES10396 | Sorghum | plasma membrane | 57.98 | 55.8 |
| Zm00001d025002_P001 | Maize | plasma membrane | 57.27 | 55.74 |
| HORVU0Hr1G001770.1 | Barley | mitochondrion, plasma membrane, plastid | 48.76 | 54.84 |
| GSMUA_Achr11P... | Banana | plasma membrane | 35.11 | 54.7 |
| TraesCS4D01G005000.1 | Wheat | plasma membrane | 50.27 | 52.94 |
| Solyc04g064940.2.1 | Tomato | plasma membrane | 48.14 | 49.91 |
| TraesCSU01G061100.1 | Wheat | plastid | 46.37 | 49.2 |
| Solyc07g065860.2.1 | Tomato | plasma membrane | 45.48 | 47.41 |
| Solyc03g112580.2.1 | Tomato | plasma membrane | 45.74 | 46.7 |
| TraesCS3D01G534900.1 | Wheat | plasma membrane | 40.69 | 45.4 |
| Solyc12g056730.1.1 | Tomato | plasma membrane, vacuole | 41.84 | 43.83 |
| Solyc12g098100.1.1 | Tomato | plasma membrane | 36.08 | 37.1 |
| Solyc07g056410.2.1 | Tomato | plasma membrane | 36.35 | 36.97 |
| Solyc04g050170.2.1 | Tomato | plasma membrane | 33.07 | 36.86 |
| Solyc02g091840.2.1 | Tomato | extracellular | 33.07 | 36.71 |
| Solyc01g103530.2.1 | Tomato | plasma membrane | 32.09 | 36.38 |
| Solyc09g091260.2.1 | Tomato | plasma membrane | 35.64 | 36.28 |
| Solyc09g064520.2.1 | Tomato | plasma membrane | 32.71 | 36.18 |
| Solyc01g080770.2.1 | Tomato | plasma membrane | 30.67 | 36.04 |
| Solyc03g093330.2.1 | Tomato | vacuole | 31.21 | 35.85 |
| Solyc04g081590.2.1 | Tomato | plasma membrane | 31.29 | 35.8 |
| Solyc05g051640.2.1 | Tomato | plasma membrane | 31.83 | 35.47 |
| Solyc03g123860.2.1 | Tomato | plasma membrane | 31.12 | 31.79 |
| Solyc07g005010.2.1 | Tomato | plasma membrane | 25.89 | 30.45 |
| Solyc03g082470.2.1 | Tomato | plasma membrane | 29.61 | 29.96 |
| Solyc03g082450.2.1 | Tomato | plasma membrane | 29.52 | 29.87 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.8.2 | MapMan:18.4.1.11 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | UniProt:K4CU24 |
| InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF07714 |
| PFAM:PF08263 | PRINTS:PR00019 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PFscan:PS51450 |
| PANTHER:PTHR27000 | PANTHER:PTHR27000:SF290 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc09g061940.1 | EnsemblPlants:Solyc09g061940.1.1 | TMHMM:TMhelix | UniParc:UPI000276BD50 | SEG:seg | : |
Description
LRR receptor-like serine/threonine-protein kinase RCH1 [Source:Projected from Arabidopsis thaliana (AT5G48940) UniProtKB/Swiss-Prot;Acc:C0LGV1]
Coordinates
chr9:+:60764008..60767487
Molecular Weight (calculated)
123008.0 Da
IEP (calculated)
5.130
GRAVY (calculated)
-0.012
Length
1128 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSRRFLDLPN LVVFLTFFLL LHNFALPSNE VDVLFSWLHS TNSPIPQAFS NWNRNDSNPC KWSHIVCSSS LFVTEIDIQF IQLALPFPSN LSSLQSLRKL
0101: IVSGANLTGT IPQDIGDCAS LVTFDVSSNG LVGTIPKTIG NLINLEDLIL NSNQLTGEIP GEVGNCINLK NLIIFDNMIS GNLPSELGKL GVLENIRAGG
0201: NKDISGKIPD ELGNCKNLIV LGLADTKISG PLPPSLGNLG KLQVLSIYTT MLSGKIPSEI GNCSELVDLY LYQNSLSGSL PAELGKLQKV EKMLFWQNNL
0301: DGLIPDEIGN CKSLVVLDLS LNFLSGSIPW SFGNLTNLQE LMISNNNISG SIPSVLSNAT NLLQFQMDTN QISGSIPPEM GQLKELNVFF AWQNKLEGSI
0401: PPALGGCRSL QALDLSHNFL TGSLPPDLFQ LTNLTKLLLI SNDISGFIPP EIGNCSSLIR IRLIGNKLSG QIPREIGFLD NLSFLDLSEN RLKGSVPEEI
0501: GNCKALQMLN LSNNTLSGNL PSFLSSLSRL EILDVSLNQF NGQIPASYGQ LANLNRLVLS KNAFSGSIPP TLGNCSSLQL LDLSSNELSE NMPAELFDIQ
0601: TLDIALNLSW NLLSGVVPPQ ISALNKLSVL DLSHNKLEGD LLSLSGLENL VSLNVSYNNF TGYLPDNKLF RQLSSAEMAG NKGLCSLGHD SCFLSNIEGG
0701: GMMSNSNVRG SWRLKLAIAL LSVVTIALAL LGMLAVYRVR KMSKEDNDSE LGGGDSSTWK FTPFQKLNFS VEQILRCLVE SNVIGKGCSG VVYRAELENG
0801: EAIAVKKLWP TTLATGYNCQ NSKSGIRGGV RDSFSTEVKT LGSIRHKNIV KFLGCCWNQN TRLLMYDYMP NGSLGSLLHE QSDRCLEWEL RYKIVLGAAQ
0901: GLAYLHHDCT PPIVHRDIKA NNILIGLDFE PYIADFGIAK LVDDGDFARS SNTVAGSYGY IAPEYGYMMK ITEKSDVYSF GVVVLEVLTG KQPIDPTIPD
1001: GVHIVDWVRQ KRGNGEVLDV SLCARPESEV DEMMQTIGVA MLCVNPSPDD RPTMKDVAAM LKEIRHEREE YQKVDMLLKD GRDNKSSSDH GGPSTKMHSL
1101: YLQSNNTSFS ASSLLHSSSS NTNNIGFK
0101: IVSGANLTGT IPQDIGDCAS LVTFDVSSNG LVGTIPKTIG NLINLEDLIL NSNQLTGEIP GEVGNCINLK NLIIFDNMIS GNLPSELGKL GVLENIRAGG
0201: NKDISGKIPD ELGNCKNLIV LGLADTKISG PLPPSLGNLG KLQVLSIYTT MLSGKIPSEI GNCSELVDLY LYQNSLSGSL PAELGKLQKV EKMLFWQNNL
0301: DGLIPDEIGN CKSLVVLDLS LNFLSGSIPW SFGNLTNLQE LMISNNNISG SIPSVLSNAT NLLQFQMDTN QISGSIPPEM GQLKELNVFF AWQNKLEGSI
0401: PPALGGCRSL QALDLSHNFL TGSLPPDLFQ LTNLTKLLLI SNDISGFIPP EIGNCSSLIR IRLIGNKLSG QIPREIGFLD NLSFLDLSEN RLKGSVPEEI
0501: GNCKALQMLN LSNNTLSGNL PSFLSSLSRL EILDVSLNQF NGQIPASYGQ LANLNRLVLS KNAFSGSIPP TLGNCSSLQL LDLSSNELSE NMPAELFDIQ
0601: TLDIALNLSW NLLSGVVPPQ ISALNKLSVL DLSHNKLEGD LLSLSGLENL VSLNVSYNNF TGYLPDNKLF RQLSSAEMAG NKGLCSLGHD SCFLSNIEGG
0701: GMMSNSNVRG SWRLKLAIAL LSVVTIALAL LGMLAVYRVR KMSKEDNDSE LGGGDSSTWK FTPFQKLNFS VEQILRCLVE SNVIGKGCSG VVYRAELENG
0801: EAIAVKKLWP TTLATGYNCQ NSKSGIRGGV RDSFSTEVKT LGSIRHKNIV KFLGCCWNQN TRLLMYDYMP NGSLGSLLHE QSDRCLEWEL RYKIVLGAAQ
0901: GLAYLHHDCT PPIVHRDIKA NNILIGLDFE PYIADFGIAK LVDDGDFARS SNTVAGSYGY IAPEYGYMMK ITEKSDVYSF GVVVLEVLTG KQPIDPTIPD
1001: GVHIVDWVRQ KRGNGEVLDV SLCARPESEV DEMMQTIGVA MLCVNPSPDD RPTMKDVAAM LKEIRHEREE YQKVDMLLKD GRDNKSSSDH GGPSTKMHSL
1101: YLQSNNTSFS ASSLLHSSSS NTNNIGFK
0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK
Arabidopsis Description
RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.