Factsheet for Os04t0132500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025002_P001	Maize	plasma membrane	83.0	82.14
EES10396	Sorghum	plasma membrane	82.91	81.14
TraesCS2A01G012900.1	Wheat	plasma membrane	79.86	78.49
TraesCS2D01G013700.1	Wheat	plasma membrane	79.08	78.39
TraesCS2B01G005000.1	Wheat	plasma membrane	79.51	78.28
HORVU0Hr1G001770.1	Barley	mitochondrion, plasma membrane, plastid	68.44	78.27
TraesCS4D01G005000.1	Wheat	plasma membrane	67.31	72.08
TraesCSU01G061100.1	Wheat	plastid	62.42	67.36
GSMUA_Achr8P12880_001	Banana	plasma membrane	40.63	66.86
GSMUA_Achr11P...	Banana	plasma membrane	41.59	65.88
CDY56672	Canola	cytosol	44.73	61.51
CDY19929	Canola	cytosol	44.55	61.2
VIT_07s0005g05420.t01	Wine grape	plasma membrane	52.05	61.11
VIT_05s0051g00540.t01	Wine grape	plasma membrane	60.07	60.39
Solyc09g091400.2.1	Tomato	plasma membrane	57.8	58.83
PGSC0003DMT400040886	Potato	plasma membrane	57.54	58.46
Solyc09g061940.1.1	Tomato	plasma membrane	57.02	57.98
Bra036154.1-P	Field mustard	plasma membrane	56.67	57.68
KRH75100	Soybean	plasma membrane, plastid	54.84	56.56
KRH70959	Soybean	plastid	56.15	56.54
CDX77472	Canola	plasma membrane	55.62	56.31
Bra014998.1-P	Field mustard	plasma membrane	55.54	56.22
CDX85146	Canola	plasma membrane	54.05	56.16
AT5G48940.1	Thale cress	plasma membrane	55.54	56.12
KRH46804	Soybean	plasma membrane	56.23	55.94
AT3G24240.1	Thale cress	plasma membrane	55.54	55.83
KRG99860	Soybean	plasma membrane	55.71	55.66
PGSC0003DMT400076250	Potato	plasma membrane	57.89	53.98
PGSC0003DMT400076247	Potato	cytosol	8.02	53.18
Os08t0493800-01	Rice	plasma membrane	39.67	48.2
Os01t0170300-01	Rice	extracellular	45.34	46.55
Os06t0589800-01	Rice	extracellular	42.72	45.71
Os04t0506100-01	Rice	cytosol	6.45	45.68
Os05t0169600-01	Rice	cytosol	8.81	44.89
Os09t0479200-01	Rice	extracellular	9.42	39.56
Os03t0773700-01	Rice	plasma membrane	29.9	38.76
Os07t0134200-01	Rice	plasma membrane	34.26	38.42
Os02t0111800-02	Rice	plasma membrane	34.09	37.6
Os06t0717200-01	Rice	plasma membrane	32.52	37.53
Os07t0152200-01	Rice	plasma membrane	36.27	37.51
Os03t0228800-01	Rice	plasma membrane	31.73	36.15
Os11t0233800-01	Rice	plasma membrane	32.78	35.44
Os10t0155800-01	Rice	cytosol	22.41	33.95
Os08t0446200-01	Rice	plasma membrane	32.0	33.0
Os03t0145102-00	Rice	plasma membrane	28.16	32.63
Os05t0595800-00	Rice	plasma membrane	24.85	32.24
Os08t0446301-00	Rice	cytosol	4.45	32.08

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4335004
EMBL:AK112081	ProteinID:BAF14011.1	ProteinID:BAS87716.1	ProteinID:EEE60433.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlantsGene:Os04g0132500	EnsemblPlants:Os04t0132500-01	PFAM:PF00069	PFAM:PF00560
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27000	PANTHER:PTHR27000:SF290	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	UniProt:Q0JF76	SMART:SM00220
SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
UniParc:UPI0000DD8F2D	RefSeq:XP_015633540.1	SEG:seg	:	:	:

Description

RECEPTOR-LIKE CYTOPLASMIC KINASE 127Protein kinase, core domain containing protein. (Os04t0132500-01);Leucine-rich repeat receptor-like kinase, Cold tolerance (Os04t0132500-02)

Coordinates

chr4:+:2034480..2038816

Molecular Weight (calculated)

119809.0 Da

IEP (calculated)

5.954

GRAVY (calculated)

0.168

Length

1147 amino acids

Sequence
(BLAST)

0001: MQLPLPPLLP SPMHFLLLLL HLLSFSSSTA ASASSEVAFL TQWLNTTAAR PPDWSPSASS PCKWSHVGCD AATGSVTSVT FQSVHLAAPL PPGICAALPS
0101: LASLVVSDAN LTGGVPDDLH LCRRLAVLDL SGNSLSGPIP ASLGNATAMA SLALNSNQLS GPIPASLGNL AASLRDLLLF DNRLSGELPA SLGELRLLES
0201: LRAGGNRDLG GEIPESFSRL SNLVVLGLAD TKISGALPAS LGRLQSLQTL SIYTTMLSGS IPAELAGCGN LTNVYLYENS LSGPLPPSLG ALPRLQKLLL
0301: WQNSLTGPIP DTFGNLTSLV SLDLSINAIS GAIPASLGRL PALQDLMLSD NNLTGTIPPA LANATSLVQL QLDTNAISGL IPPELGRLAA LQVVFAWQNQ
0401: LEGSIPASLA GLANLQALDL SHNHLTGAIP PGIFLLRNLT KLLLLSNDLS GVIPPEIGKA ASLVRLRLGG NRLAGTIPAA VAGMRSINFL DLGSNRLAGG
0501: VPAELGNCSQ LQMLDLSNNT LTGALPESLA GVRGLQEIDV SHNQLTGGVP DAFGRLEALS RLVLSGNSLS GAIPAALGKC RNLELLDLSD NALSGRIPDE
0601: LCAIDGLDIA LNLSRNGLTG PIPARISALS KLSVLDLSYN ALDGGLAPLA GLDNLVTLNV SNNNFTGYLP DTKLFRQLST SCLAGNSGLC TKGGDVCFVS
0701: IDASGRPVMS ADEEEVQRMH RLKLAIALLV TATVAMVLGM VGILRARGMG IVGGKGGHGG GSSDSESGGD LAWPWQFTPF QKLSFSVEQV VRNLVDANII
0801: GKGCSGVVYR VGLDTGEVIA VKKLWPSTRN GADKDDVAGG GRVRDSFSAE VRTLGCIRHK NIVRFLGCCW NKTTRLLMYD YMANGSLGAV LHERRHGGHG
0901: GGGAQLEWDV RYRIVLGAAQ GLAYLHHDCV PPIVHRDIKA NNILIGLDFE AYIADFGLAK LVDDGDFGRS SNTVAGSYGY IAPEYGYMMK ITEKSDVYSY
1001: GVVVLEVLTG KQPIDPTIPD GQHVVDWVRR RKGAADVLDP ALRGRSDAEV DEMLQVMGVA LLCVAPSPDD RPAMKDVAAM LNEIRLDRDD YANVDLLLKS
1101: GAAAASPPRA AAAATSTSSS TPPSSSSFSG SSAMIYNSSS KAKSPFD

Best Arabidopsis Sequence Match ( AT5G48940.1 )
(BLAST)

0001: MSLQMPIPRK KALTVSHFSI TLSLFLAFFI SSTSASTNEV SALISWLHSS NSPPPSVFSG WNPSDSDPCQ WPYITCSSSD NKLVTEINVV SVQLALPFPP
0101: NISSFTSLQK LVISNTNLTG AISSEIGDCS ELIVIDLSSN SLVGEIPSSL GKLKNLQELC LNSNGLTGKI PPELGDCVSL KNLEIFDNYL SENLPLELGK
0201: ISTLESIRAG GNSELSGKIP EEIGNCRNLK VLGLAATKIS GSLPVSLGQL SKLQSLSVYS TMLSGEIPKE LGNCSELINL FLYDNDLSGT LPKELGKLQN
0301: LEKMLLWQNN LHGPIPEEIG FMKSLNAIDL SMNYFSGTIP KSFGNLSNLQ ELMLSSNNIT GSIPSILSNC TKLVQFQIDA NQISGLIPPE IGLLKELNIF
0401: LGWQNKLEGN IPDELAGCQN LQALDLSQNY LTGSLPAGLF QLRNLTKLLL ISNAISGVIP LEIGNCTSLV RLRLVNNRIT GEIPKGIGFL QNLSFLDLSE
0501: NNLSGPVPLE ISNCRQLQML NLSNNTLQGY LPLSLSSLTK LQVLDVSSND LTGKIPDSLG HLISLNRLIL SKNSFNGEIP SSLGHCTNLQ LLDLSSNNIS
0601: GTIPEELFDI QDLDIALNLS WNSLDGFIPE RISALNRLSV LDISHNMLSG DLSALSGLEN LVSLNISHNR FSGYLPDSKV FRQLIGAEME GNNGLCSKGF
0701: RSCFVSNSSQ LTTQRGVHSH RLRIAIGLLI SVTAVLAVLG VLAVIRAKQM IRDDNDSETG ENLWTWQFTP FQKLNFTVEH VLKCLVEGNV IGKGCSGIVY
0801: KAEMPNREVI AVKKLWPVTV PNLNEKTKSS GVRDSFSAEV KTLGSIRHKN IVRFLGCCWN KNTRLLMYDY MSNGSLGSLL HERSGVCSLG WEVRYKIILG
0901: AAQGLAYLHH DCVPPIVHRD IKANNILIGP DFEPYIGDFG LAKLVDDGDF ARSSNTIAGS YGYIAPEYGY SMKITEKSDV YSYGVVVLEV LTGKQPIDPT
1001: IPDGLHIVDW VKKIRDIQVI DQGLQARPES EVEEMMQTLG VALLCINPIP EDRPTMKDVA AMLSEICQER EESMKVDGCS GSCNNGRERG KDDSTSSVMQ
1101: QTAKYLRSSS TSFSASSLLY SSSSSATSNV RPNLK

Arabidopsis Description

RCH1LRR receptor-like serine/threonine-protein kinase RCH1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGV1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.