CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89328	Canola	cytosol	96.96	96.96
AT4G26540.1	Thale cress	plasma membrane	87.53	73.97
CDY17379	Canola	plasma membrane	81.02	68.72
CDY28619	Canola	plasma membrane	78.63	68.01
VIT_19s0015g01120.t01	Wine grape	plasma membrane	64.75	58.41
KRG98433	Soybean	plasma membrane	68.22	57.71
KRH46430	Soybean	plasma membrane	68.0	57.42
Solyc07g065860.2.1	Tomato	plasma membrane	67.03	57.12
PGSC0003DMT400057334	Potato	plasma membrane	67.03	57.06
KRH73937	Soybean	plasma membrane	65.4	55.83
KRH14195	Soybean	plasma membrane	65.94	55.63
GSMUA_Achr9P19720_001	Banana	plasma membrane	48.37	50.86
EES15451	Sorghum	plasma membrane	60.41	50.68
Os08t0493800-01	Rice	plasma membrane	51.63	50.42
TraesCS7D01G234800.2	Wheat	plasma membrane	59.98	50.41
TraesCS7B01G133000.1	Wheat	plasma membrane	59.98	50.36
Zm00001d052835_P001	Maize	plasma membrane	60.41	50.36
GSMUA_Achr3P10820_001	Banana	plasma membrane	46.31	50.06
TraesCS7A01G234800.1	Wheat	plasma membrane	59.76	50.05
Zm00001d005986_P001	Maize	plasma membrane	59.33	49.86
TraesCS5A01G254600.1	Wheat	plasma membrane	59.22	49.86
TraesCS5B01G253700.1	Wheat	plasma membrane	58.89	49.59
TraesCS5D01G262400.1	Wheat	plasma membrane	58.89	49.59
KXG35861	Sorghum	plastid	60.3	48.99
HORVU7Hr1G048140.2	Barley	plasma membrane, plastid	59.76	48.67
Zm00001d020862_P001	Maize	plastid	59.87	48.51
HORVU5Hr1G071340.2	Barley	plastid	58.57	47.45
CDY56672	Canola	cytosol	42.73	47.24
CDY19929	Canola	cytosol	42.73	47.19
CDX89518	Canola	cytosol	0.54	41.67
CDY06535	Canola	plasma membrane	71.04	41.59
CDX77472	Canola	plasma membrane	49.57	40.34
CDX85146	Canola	plasma membrane	47.51	39.67
CDY28391	Canola	plasma membrane	43.93	37.82
CDX73290	Canola	plasma membrane	44.14	37.07
CDX93999	Canola	cytosol, nucleus, plasma membrane	33.19	36.26
CDY54567	Canola	cytosol, plasma membrane, plastid	33.08	36.14
CDX98665	Canola	cytosol, nucleus, plasma membrane	32.75	35.78
CDY31445	Canola	cytosol, plasma membrane, plastid	32.75	35.78
CDY23764	Canola	plasma membrane	37.74	32.68
CDY02112	Canola	plasma membrane	33.51	31.89
CDY23037	Canola	plasma membrane	33.3	31.75
CDY08759	Canola	plasma membrane	33.19	31.51
CDY45620	Canola	plasma membrane	33.19	31.45
CDY35204	Canola	plasma membrane	34.27	31.44
CDY37749	Canola	plasma membrane	31.45	31.15
CDY26259	Canola	plastid	35.79	30.58
CDX73202	Canola	plasma membrane	32.54	30.4
CDX87661	Canola	plasma membrane	31.78	30.36
CDY66353	Canola	plasma membrane	28.2	30.27
CDY38373	Canola	plasma membrane	31.56	30.25
CDY37560	Canola	plasma membrane	31.89	30.22
CDY31136	Canola	plasma membrane	33.3	30.1
CDX97498	Canola	plasma membrane	33.3	30.07
CDY48481	Canola	plasma membrane	36.01	29.96
CDY68314	Canola	plasma membrane	29.5	29.92
CDY62258	Canola	plasma membrane	28.2	29.85
CDY23065	Canola	plasma membrane	32.21	29.23
CDY59496	Canola	plasma membrane	32.21	29.12
CDY02141	Canola	plasma membrane	28.09	29.07
CDY65166	Canola	plasma membrane	31.24	28.04
CDX73169	Canola	plasma membrane	26.36	27.15
CDX68246	Canola	plasma membrane	32.32	27.02
CDY11130	Canola	plasma membrane	29.93	26.69
CDX72170	Canola	plasma membrane	25.05	25.96
CDY27242	Canola	plasma membrane	24.84	25.56
CDY14942	Canola	plasma membrane	32.86	24.38
CDX96976	Canola	plasma membrane	32.65	24.22
Os09t0479200-01	Rice	extracellular	5.97	20.15

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.1.8.2	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078E0Y9
EnsemblPlants:CDX94319	ProteinID:CDX94319	ProteinID:CDX94319.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00157422001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF186	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EE1F6D	SEG:seg	:	:	:	:

Description

BnaC01g18650D

Coordinates

chrLK031881:+:203512..206540

Molecular Weight (calculated)

100104.0 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.043

Length

922 amino acids

Sequence
(BLAST)

001: MLFDNKLSGE IPKSIGELKN LESFRAGGNK NIRGEVPWEI GNCEHLKMLG LAETSLSGRL PASIGNLKRV QTIAIYTSLL SGPIPDEIGH CTELQNLYLY
101: QNSISGSIPT TVGGLKKLQS LLLWENNLVG KIPTELGNCP DLWLIDLSEN HLTGNIPRSF GSLTNLQELQ LSVNQISGTI PEELANCSKL THLEIDNNLI
201: TGEIPALMGN LKSLTMFFAW QNKLTGNIPG SLSECGELQA IDLSYNSLSG SIPKEIFELR NLTKLLLLSN DLSGVIPPEI GNCTNLYRLR LNGNRLAGNI
301: PREMGNLKNL NFIDLSENRL VGVIPPAISG CESLEFLDLH SNSLSGSFLG TLPKSLKFID FSDNSLTGPL PPGIGLLTEL TKLNLAKNRL SGDIPREIST
401: CLSLQLLNLG DNAFTGEIPD ELSQIPSLAI SLNLSCNAFV GEIPARFSDL KNLGVLDISH NRLTGKLTVL SDMQNLVSLN VSFNDFSGEL PDTPFFRKLP
501: LSDLASNKGL YISDGISTRP DGLASSTRSS SAVKLGISVL IAVTAVLVLL AVYTLVRARA AGKQLLDEEI DSWDVTLYQK LDFSIDDIVK NLTSANVIGT
601: GSSGVVYRIA IPSGETLAVK KMWAREQSDA FNSEINTLGS IRHRNIVRLL GWCSNRNLKL LFYDYLRNGS LSSRLHSAGK GGGVSWEARY DVVLGVAHAL
701: AYLHHDCLPA IIHGDVKAMN VLLGPQFEPY LADFGLARTV TGNANTGIDS SKSSNRPPLA GSYGYMAPEH GSMQRITEKS DVYSYGVVLL EVLTGKHPLD
801: PDLPGGAHLV KWVRDHLAEK KDPSKLLDPR LDGRTDTIMH EMLQTLAVAF LCVSNKASER PMMKDVVAML TEIRDIDVGR SETDKIKDGS CGSKEPQVIS
901: HEKIIIAHGS SNCSFAFSDD SV

Best Arabidopsis Sequence Match ( AT4G26540.1 )
(BLAST)

0001: MPPNIYRLSF FSSLLCFFFI PCFSLDQQGQ ALLSWKSQLN ISGDAFSSWH VADTSPCNWV GVKCNRRGEV SEIQLKGMDL QGSLPVTSLR SLKSLTSLTL
0101: SSLNLTGVIP KEIGDFTELE LLDLSDNSLS GDIPVEIFRL KKLKTLSLNT NNLEGHIPME IGNLSGLVEL MLFDNKLSGE IPRSIGELKN LQVLRAGGNK
0201: NLRGELPWEI GNCENLVMLG LAETSLSGKL PASIGNLKRV QTIAIYTSLL SGPIPDEIGY CTELQNLYLY QNSISGSIPT TIGGLKKLQS LLLWQNNLVG
0301: KIPTELGNCP ELWLIDFSEN LLTGTIPRSF GKLENLQELQ LSVNQISGTI PEELTNCTKL THLEIDNNLI TGEIPSLMSN LRSLTMFFAW QNKLTGNIPQ
0401: SLSQCRELQA IDLSYNSLSG SIPKEIFGLR NLTKLLLLSN DLSGFIPPDI GNCTNLYRLR LNGNRLAGSI PSEIGNLKNL NFVDISENRL VGSIPPAISG
0501: CESLEFLDLH TNSLSGSLLG TTLPKSLKFI DFSDNALSST LPPGIGLLTE LTKLNLAKNR LSGEIPREIS TCRSLQLLNL GENDFSGEIP DELGQIPSLA
0601: ISLNLSCNRF VGEIPSRFSD LKNLGVLDVS HNQLTGNLNV LTDLQNLVSL NISYNDFSGD LPNTPFFRRL PLSDLASNRG LYISNAISTR PDPTTRNSSV
0701: VRLTILILVV VTAVLVLMAV YTLVRARAAG KQLLGEEIDS WEVTLYQKLD FSIDDIVKNL TSANVIGTGS SGVVYRITIP SGESLAVKKM WSKEESGAFN
0801: SEIKTLGSIR HRNIVRLLGW CSNRNLKLLF YDYLPNGSLS SRLHGAGKGG CVDWEARYDV VLGVAHALAY LHHDCLPTII HGDVKAMNVL LGPHFEPYLA
0901: DFGLARTISG YPNTGIDLAK PTNRPPMAGS YGYMAPEHAS MQRITEKSDV YSYGVVLLEV LTGKHPLDPD LPGGAHLVKW VRDHLAEKKD PSRLLDPRLD
1001: GRTDSIMHEM LQTLAVAFLC VSNKANERPL MKDVVAMLTE IRHIDVGRSE TEKIKAGGCG SKEPQQFMSN EKIINSHGSS NCSFAFSDDS V

Arabidopsis Description

RGI3LRR receptor-like serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:C0LGR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.