Factsheet for VIT_11s0149g00090.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12906	Soybean	plasma membrane	67.39	68.23
KRH37902	Soybean	plasma membrane	66.26	67.43
PGSC0003DMT400030886	Potato	plasma membrane	63.79	64.65
Solyc07g005010.2.1	Tomato	plasma membrane	63.58	64.44
AT5G51350.1	Thale cress	plasma membrane	55.45	60.22
CDY27242	Canola	plasma membrane	54.73	59.38
CDX72170	Canola	plasma membrane	54.12	59.1
VIT_16s0013g01990.t01	Wine grape	nucleus, plasma membrane, vacuole	41.15	38.54
VIT_18s0001g14610.t01	Wine grape	plasma membrane	33.85	33.57
VIT_01s0010g00330.t01	Wine grape	plasma membrane	32.82	32.29
VIT_04s0008g03240.t01	Wine grape	plasma membrane	31.58	31.75
VIT_12s0035g00990.t01	Wine grape	plasma membrane	31.79	31.66
VIT_00s1353g00010.t01	Wine grape	plasma membrane	32.82	31.37
VIT_18s0001g02590.t01	Wine grape	plastid	28.5	29.56
VIT_19s0015g01120.t01	Wine grape	plasma membrane	29.32	27.89
VIT_05s0051g00460.t01	Wine grape	plasma membrane	31.58	27.78
VIT_18s0001g15720.t01	Wine grape	plasma membrane	30.66	27.39
VIT_17s0000g08900.t01	Wine grape	plasma membrane	30.45	27.21
VIT_07s0005g05420.t01	Wine grape	plasma membrane	26.44	26.3
VIT_19s0027g00010.t01	Wine grape	plasma membrane	29.84	26.1
VIT_09s0018g01900.t01	Wine grape	plasma membrane	27.06	26.07
VIT_05s0051g00540.t01	Wine grape	plasma membrane	29.94	25.5
VIT_07s0005g04390.t01	Wine grape	plasma membrane	33.64	23.06
VIT_01s0010g00380.t01	Wine grape	plasma membrane	29.63	22.97
VIT_16s0098g01090.t01	Wine grape	plasma membrane, plastid	23.15	21.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100265415	wikigene:100265415	MapMan:18.4.1.11	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB49946	ProteinID:CCB49946.1	UniProt:F6HCK1	EMBL:FN595516	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0040007	GO:GO:2000604	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100265415	wikigene:LOC100265415	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF305	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-TM	TIGR:TC67801	TMHMM:TMhelix	UniParc:UPI00015CC8E4	ArrayExpress:VIT_11s0149g00090
EnsemblPlantsGene:VIT_11s0149g00090	EnsemblPlants:VIT_11s0149g00090.t01	RefSeq:XP_002264530	RefSeq:XP_002264530.2	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:6913136..6916698

Molecular Weight (calculated)

107105.0 Da

IEP (calculated)

5.571

GRAVY (calculated)

0.030

Length

972 amino acids

Sequence
(BLAST)

001: MEIFRSFCVS VLGALLVIEA VLAADLFSDA LLSLKSEFVD DSNSLADWFV PPGVEEYDKV YACSWFEVTC NKNSSLVIGL DLSSKNLGGI ISGKQFSVFT
101: ELVDLNLSYN SFSEQLPVEI FNLTNLRSLD ISRNNFSGHF PGGVSRLEHL VVLDAFSNSF SGPLPTEVSQ LEYLKVLNLA GSYFKGPIPS EYGSFKSLEF
201: IHLAGNLLSG SIPPELGKLS TVTHMEIGYN SYQGSIPWQL GNMTEIQYLD IAGADLSGSI PKQLSNLTKL QSLFLFRNQL TGLIPSEFSR IVTLTDLDLS
301: DNQLSGSIPE SFSELKNLRL LSLMYNDMSG TVPESIAELP LLDTLLIWNN FFSGSLPQSL GTNSKLKWVD VSTNNFNGPI PPEICTGGVL FKLILFSNNF
401: TGGLSPSLSN CSSLVRLRLE NNSFSGEIPL RFSHLPEITY VDLSGNGFTG GIPTDISQAS NLQYFNVSKN SELGGMLPAK IWSLPLLQNF SASSCKISGH
501: IPAFQVCKNI TVIEVSMNNL SGIIPESISS CQALEMVNLA NNNFTGHIPE QLASLHELAV VDLSHNNLTG PIPEKLSNLS SLLLINVSFN DISGSIPSEK
601: IFRVMGSSAF VGNSKLCGEP LKPCADSEGI QHGFKLGSKS KDKLKWVLLL CAGVLLFILV SVLGIFYFRR GSKGRWEMVS FSGLPRFTAN DVLRSFSSTE
701: SMETTPPLSS SVCKAVLPTG ITVSVKKIEW EAKRMKVMSE FITRIGNARH KNLIRLLGFC YNKHVAYLLY DYLPNGNLAE KIRMKRDWTA KYKIVIGIAR
801: GLHYLHHECY PAIPHGDLKS SDILFDENME PHLAEFGFKL LAELNKASLP STISRTETGE FNPAIKEELY TDIYSFGEVI METITNGRLT NAGGSIQSKP
901: REALLREIYN ENEVGSADSM QEEIKLVFEV ALLCTRSRPS DRPSMEDVLN LLSGLKSQRF IGFEVTKKQE NF

Best Arabidopsis Sequence Match ( AT5G51350.1 )
(BLAST)

001: MASSKHNKLC SFFYLCLFLT LVAAAEPQTE SLLTLKSQLT DNFNSLKDWF INTPEVSDNL VACCSWSGVR CNQNSTSVVS VDLSSKNLAG SLSGKEFLVF
101: TELLELNISD NSFSGEFPAE IFFNMTNLRS LDISRNNFSG RFPDGNGGDS SLKNLIFLDA LSNSFSGPLP IHLSQLENLK VLNLAGSYFT GSIPSQYGSF
201: KNLEFLHLGG NLLSGHIPQE LGNLTTLTHM EIGYNSYEGV IPWEIGYMSE LKYLDIAGAN LSGFLPKHFS NLTKLESLFL FRNHLSREIP WELGEITSLV
301: NLDLSDNHIS GTIPESFSGL KNLRLLNLMF NEMSGTLPEV IAQLPSLDTL FIWNNYFSGS LPKSLGMNSK LRWVDVSTNS FQGEIPQGIC SRGVLFKLIL
401: FSNNFTGTLS PSLSNCSTLV RIRLEDNSFS GVIPFSFSEI PDISYIDLSR NKLTGGIPLD ISKATKLDYF NISNNPELGG KLPPHIWSAP SLQNFSASSC
501: SISGGLPVFE SCKSITVIEL SNNNISGMLT PTVSTCGSLK KMDLSHNNLR GAIPSDKVFQ SMGKHAYESN ANLCGLPLKS CSAYSSRKLV SVLVACLVSI
601: LLMVVAALAL YYIRQRSQGQ WKMVSFAGLP HFTADDVLRS FGSPEPSEAV PASVSKAVLP TGITVIVRKI ELHDKKKSVV LNVLTQMGNA RHVNLVRLLG
701: FCYNNHLVYV LYDNNLHTGT TLAEKMKTKK KDWQTKKRII TGVAKGLCFL HHECLPAIPH GDVKSSNILF DDDKIEPCLG EFGFKYMLHL NTDQMNDVIR
801: VEKQKDVYNF GQLILEILTN GKLMNAGGLM IQNKPKDGLL REVYTENEVS SSDFKQGEVK RVVEVALLCI RSDQSDRPCM EDALRLLSEA ENRFK

Arabidopsis Description

Leucine-rich repeat receptor-like protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9FGN6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.