Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97580 | Canola | extracellular, plasma membrane | 89.39 | 79.68 |
| AT3G14470.1 | Thale cress | endoplasmic reticulum | 83.8 | 71.16 |
| KRG89840 | Soybean | cytosol, endoplasmic reticulum | 23.8 | 34.08 |
| KRH28145 | Soybean | cytosol | 30.28 | 32.53 |
| Solyc08g007630.1.1 | Tomato | plasma membrane | 33.41 | 30.26 |
| KRH18620 | Soybean | cytosol | 39.78 | 28.8 |
| VIT_12s0121g00050.t01 | Wine grape | cytosol | 40.78 | 28.36 |
| KRG89748 | Soybean | nucleus | 38.88 | 27.66 |
| KRG89841 | Soybean | cytosol | 38.21 | 27.6 |
| KRG89749 | Soybean | cytosol | 38.44 | 27.34 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 28.27 | 26.19 |
| Solyc11g071420.1.1 | Tomato | nucleus | 35.08 | 25.97 |
| PGSC0003DMT400070503 | Potato | plasma membrane | 36.42 | 25.41 |
| KRH18623 | Soybean | cytosol | 27.93 | 25.3 |
| Os09t0314200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 28.94 | 25.17 |
| Solyc03g078300.1.1 | Tomato | extracellular, nucleus, plasma membrane | 37.54 | 25.06 |
| Zm00001d019356_P001 | Maize | cytosol | 26.82 | 25.03 |
| KXG34889 | Sorghum | cytosol | 26.93 | 24.79 |
| Os07t0273600-01 | Rice | mitochondrion | 12.07 | 24.77 |
| PGSC0003DMT400035672 | Potato | extracellular, plasma membrane | 37.21 | 24.7 |
| OQU91449 | Sorghum | mitochondrion | 21.23 | 24.48 |
| Solyc11g069620.1.1 | Tomato | extracellular | 34.19 | 24.46 |
| CDX98462 | Canola | cytosol, plastid | 22.12 | 24.41 |
| OQU91451 | Sorghum | cytosol, mitochondrion | 29.72 | 24.23 |
| PGSC0003DMT400007707 | Potato | cytosol, extracellular, nucleus | 33.52 | 24.06 |
| PGSC0003DMT400024448 | Potato | cytosol | 33.52 | 23.98 |
| Os04t0512900-01 | Rice | nucleus | 20.11 | 23.97 |
| PGSC0003DMT400018940 | Potato | endoplasmic reticulum, extracellular | 33.97 | 23.94 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 26.03 | 23.9 |
| Os07t0273900-01 | Rice | cytosol | 19.11 | 23.68 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.05 | 23.68 |
| Os01t0308300-00 | Rice | plastid | 28.04 | 23.24 |
| PGSC0003DMT400077717 | Potato | cytosol | 27.15 | 23.01 |
| PGSC0003DMT400050640 | Potato | cytosol | 33.74 | 22.84 |
| CDX97579 | Canola | cytosol | 32.51 | 22.7 |
| GSMUA_Achr10P... | Banana | nucleus | 27.93 | 22.03 |
| EES11060 | Sorghum | nucleus | 23.24 | 21.64 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 29.39 | 21.38 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 17.77 | 21.31 |
| Os03t0579200-00 | Rice | cytosol | 28.16 | 20.22 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 17.43 | 19.95 |
| Os03t0579900-01 | Rice | cytosol | 3.24 | 12.5 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:A0A078EGJ1 | EnsemblPlants:CDX98463 | ProteinID:CDX98463 |
| ProteinID:CDX98463.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 |
| EnsemblPlantsGene:GSBRNA2T00106083001 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 |
| PRINTS:PR00364 | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF862 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0004EF0A76 |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g39120D
Coordinates
chrLK031905:+:297624..302010
Molecular Weight (calculated)
102817.0 Da
IEP (calculated)
7.356
GRAVY (calculated)
-0.302
Length
895 amino acids
Sequence
(BLAST)
(BLAST)
001: MIVGEMVLSA FLQALFQTLM SGPFKSFFKR RELNECVLER LNIALLTISA VLIDAEEKQI TNPSVEKWVN ELRDVVYHAE DALDDIATEA LRLNIGAESS
101: SNRLRQLRVR TLGDFLERNS DHLETRLEKV TMRLERLASQ RNILGLKEIT AMTPKQRLPT TSLVDESEVV GRDDDKDEIM RFLIPENGED SGTTVVAIVG
201: IGGVGKTTLS QLLYNDHRVQ NHFGTRVWAH VSEEFDVFTI TKKVYESVTS RPCEFTDLDV LQVKLKERLI GPFLLVLDDL WNENFADWDL LRQPFTSAAQ
301: GSRIIPLSDG DCWSLFMRTV FPNQDPCLDQ EIGDLAERIV YKCHGLPLAA KTLGGVLRFE GNVVEWERVL SSRIWDLPAD KSNLLPVLRE RVVLLWMAEG
401: FLQQTRSSKN LEELGGEYFS ELESRSLFQK TKTSYMMHDF INELSQFASG EFSSKFENGC RLHVSEKTRY LSYLRDNYGE PMRFEALREV KFLRTFLPLS
501: LTNSSRLPSD FSRNLSHARF LDLSRTELEK LPKSLYICNL INLRYLDLIG TKLKQMPKRF GRLKSLQTLT TFFLQRVVDV ADAAGANLDS KKHLKEIDFV
601: WRTGSTEVFE KLRPHRRIEK LAIERYNGKK FPDWLCDSSF SRVVCIRLRE CRNCSSLPSF GQLPGLKELY ISGMVGLRSI GSGFYSSPSL RDRDQQPFKS
701: LETLRFDNLP DLEDWSDIRV TKGDLFPSLK KLSILRCPEL TGNLPTFLPS LISLHIHKCG VLDFQPDHHE YSYRNLQMLS IKSSCDSLVT FPLSHFASLH
801: TLEFDNCISL QSLQLSKEHS FGPNALRNLR INDCQNLQRL PELNLQVTVT VTNCRNLRQP MEPQPQYHQQ KVEGYYTLYK STTLCQKLAC LQTRS
101: SNRLRQLRVR TLGDFLERNS DHLETRLEKV TMRLERLASQ RNILGLKEIT AMTPKQRLPT TSLVDESEVV GRDDDKDEIM RFLIPENGED SGTTVVAIVG
201: IGGVGKTTLS QLLYNDHRVQ NHFGTRVWAH VSEEFDVFTI TKKVYESVTS RPCEFTDLDV LQVKLKERLI GPFLLVLDDL WNENFADWDL LRQPFTSAAQ
301: GSRIIPLSDG DCWSLFMRTV FPNQDPCLDQ EIGDLAERIV YKCHGLPLAA KTLGGVLRFE GNVVEWERVL SSRIWDLPAD KSNLLPVLRE RVVLLWMAEG
401: FLQQTRSSKN LEELGGEYFS ELESRSLFQK TKTSYMMHDF INELSQFASG EFSSKFENGC RLHVSEKTRY LSYLRDNYGE PMRFEALREV KFLRTFLPLS
501: LTNSSRLPSD FSRNLSHARF LDLSRTELEK LPKSLYICNL INLRYLDLIG TKLKQMPKRF GRLKSLQTLT TFFLQRVVDV ADAAGANLDS KKHLKEIDFV
601: WRTGSTEVFE KLRPHRRIEK LAIERYNGKK FPDWLCDSSF SRVVCIRLRE CRNCSSLPSF GQLPGLKELY ISGMVGLRSI GSGFYSSPSL RDRDQQPFKS
701: LETLRFDNLP DLEDWSDIRV TKGDLFPSLK KLSILRCPEL TGNLPTFLPS LISLHIHKCG VLDFQPDHHE YSYRNLQMLS IKSSCDSLVT FPLSHFASLH
801: TLEFDNCISL QSLQLSKEHS FGPNALRNLR INDCQNLQRL PELNLQVTVT VTNCRNLRQP MEPQPQYHQQ KVEGYYTLYK STTLCQKLAC LQTRS
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.