Factsheet for PGSC0003DMT400077717

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018940	Potato	endoplasmic reticulum, extracellular	70.45	58.58
PGSC0003DMT400070503	Potato	plasma membrane	70.36	57.91
PGSC0003DMT400024448	Potato	cytosol	68.28	57.63
PGSC0003DMT400007707	Potato	cytosol, extracellular, nucleus	67.61	57.26
PGSC0003DMT400050640	Potato	cytosol	67.8	54.16
PGSC0003DMT400035672	Potato	extracellular, plasma membrane	54.07	42.36
VIT_12s0034g01070.t01	Wine grape	cytosol	33.14	38.55
KRH18623	Soybean	cytosol	33.14	35.43
KRH20675	Soybean	cytosol	28.31	34.21
KRH65532	Soybean	cytosol	27.94	33.95
KRH65486	Soybean	cytosol	31.82	33.87
VIT_12s0121g00060.t01	Wine grape	cytosol	36.84	33.33
VIT_13s0067g01100.t01	Wine grape	extracellular	28.79	32.41
KRH65554	Soybean	cytosol	21.4	32.38
KRH13325	Soybean	cytosol	28.22	32.08
VIT_12s0034g01660.t01	Wine grape	extracellular	27.65	31.67
KRH65544	Soybean	cytosol	35.98	31.64
VIT_12s0121g00050.t01	Wine grape	cytosol	38.54	31.62
KRH65539	Soybean	cytosol	35.8	31.47
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	34.19	31.2
KRH20599	Soybean	extracellular, plasma membrane	34.66	30.99
KRG89748	Soybean	nucleus	36.46	30.6
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	39.2	30.46
VIT_12s0034g02500.t01	Wine grape	extracellular	39.58	30.42
KRH20671	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.09	30.3
KRH13321	Soybean	cytosol	33.62	30.21
KRG89841	Soybean	cytosol	35.42	30.19
KRH65538	Soybean	cytosol	35.23	30.05
KRG89749	Soybean	cytosol	35.8	30.05
KRH65421	Soybean	extracellular, vacuole	34.56	29.99
KRH65453	Soybean	extracellular, plasma membrane	35.32	29.94
KRH28145	Soybean	cytosol	23.58	29.89
KRH65458	Soybean	extracellular, plasma membrane	34.56	29.8
KRH20688	Soybean	plasma membrane	34.47	29.76
KRH13317	Soybean	extracellular	34.0	29.74
KRH65481	Soybean	extracellular, plasma membrane	33.71	29.74
KRH65483	Soybean	extracellular, plasma membrane	35.13	29.73
KRH13352	Soybean	extracellular	32.58	29.71
KRH13358	Soybean	extracellular	33.81	29.65
KRH65580	Soybean	plasma membrane	34.19	29.61
Bra027332.1-P	Field mustard	extracellular	29.17	29.56
KRH65454	Soybean	extracellular, plasma membrane	34.94	29.54
KRH18620	Soybean	cytosol	34.56	29.53
AT3G14470.1	Thale cress	endoplasmic reticulum	29.45	29.51
KRH65557	Soybean	cytosol	21.69	29.43
KRH20659	Soybean	extracellular, plasma membrane	34.28	29.38
KRH65561	Soybean	extracellular, plasma membrane	34.56	29.34
KRH65534	Soybean	cytosol	33.24	29.3
KRH65416	Soybean	extracellular, plasma membrane	33.9	29.3
GSMUA_Achr10P...	Banana	cytosol, golgi	20.64	29.22
KRH65423	Soybean	extracellular, plasma membrane	34.47	29.19
KRH65543	Soybean	nucleus	32.39	29.16
KRH13258	Soybean	extracellular	33.81	28.95
KRH65991	Soybean	plasma membrane	34.0	28.93
KRH65572	Soybean	nucleus	29.17	28.87
KRH13312	Soybean	cytosol	13.45	28.69
VIT_13s0106g00020.t01	Wine grape	cytosol	34.75	28.67
KRH20538	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.09	28.5
KRH20627	Soybean	extracellular, plasma membrane	32.1	28.23
PGSC0003DMT400012949	Potato	extracellular	36.93	28.1
KRH76052	Soybean	endoplasmic reticulum	32.39	28.03
KRH55423	Soybean	plasma membrane	31.91	27.99
KRH65418	Soybean	extracellular, plasma membrane	28.31	27.79
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	20.55	27.75
KRH13327	Soybean	extracellular	28.69	27.27
VIT_13s0067g02430.t01	Wine grape	extracellular	37.59	27.17
CDX98463	Canola	endoplasmic reticulum	23.01	27.15
KRH20633	Soybean	extracellular	32.67	26.95
KRH13323	Soybean	cytosol	25.19	26.57
KRH13356	Soybean	extracellular	18.94	26.39
KRH56350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.52	26.37
VIT_13s0067g02580.t01	Wine grape	extracellular	36.65	26.31
CDX97580	Canola	extracellular, plasma membrane	25.0	26.29
KRG89840	Soybean	cytosol, endoplasmic reticulum	15.34	25.92
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	29.45	25.28
GSMUA_Achr9P11390_001	Banana	extracellular	23.11	25.26
EES11060	Sorghum	nucleus	22.92	25.18
GSMUA_Achr6P32070_001	Banana	cytosol	25.95	24.95
KRH13355	Soybean	plastid	33.14	24.95
Os01t0308300-00	Rice	plastid	25.09	24.54
OQU91451	Sorghum	cytosol, mitochondrion	25.19	24.23
KRH45935	Soybean	endoplasmic reticulum, extracellular	14.77	24.19
GSMUA_Achr10P...	Banana	nucleus	25.85	24.05
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	23.3	23.91
KXG34889	Sorghum	cytosol	21.78	23.66
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	21.78	23.59
Zm00001d019356_P001	Maize	cytosol	21.31	23.46
Os03t0579900-01	Rice	cytosol	5.02	22.84
OQU91449	Sorghum	mitochondrion	16.48	22.42
Os07t0273900-01	Rice	cytosol	14.87	21.75
Os04t0512900-01	Rice	nucleus	15.34	21.57
Os03t0579200-00	Rice	cytosol	23.67	20.06
KRH65531	Soybean	cytosol	6.53	19.33
Os07t0273600-01	Rice	mitochondrion	6.72	16.28
KRH20628	Soybean	extracellular	33.52	16.1

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M1CYT7	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG402030235
PGSC:PGSC0003DMG402030235	EnsemblPlants:PGSC0003DMT400077717	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF414	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0002959712	SEG:seg	:	:	:

Description

Disease resistance protein R3a [Source:PGSC_GENE;Acc:PGSC0003DMG402030235]

Coordinates

chr11:-:44214788..44219141

Molecular Weight (calculated)

120706.0 Da

IEP (calculated)

7.512

GRAVY (calculated)

-0.173

Length

1056 amino acids

Sequence
(BLAST)

0001: MGGVGKTTLA KAVYNDEKVK NHFGLKAWIC VSEPYDILRI TKELLQEIGL TVDNNLNQLQ VKLKESLKAK KFLIVLDDVW SDDYKEWDDF RNIFVQGDVG
0101: SKIIVTTRKE SVALMMGSGA INVGTLSSEV SWDLFKQHSL ENRDPEEHPE LEEVGKQISH RCKGLPLALK ALAGILRSKF EVNEWTDILR SEIWELPHHP
0201: NGILPALMLS YNDLPPHLKR CFAFCAIYPK DYLFCKEQVI HLWIANGLVQ QLHSANQYFL ELRSRSLFER VRKSSKWTSR EFLMHDLVND LAQIASSNRC
0301: IRLEDIEASH MLERTRHLSY SMDDRDFGKL KILKKLEQLR TLLTINIRWY SSHLSKRVLH DILPRLTSLR ALSLSQYQNK ELPNDLFIKL KHLRFLDLSW
0401: TFIKKLPDSI CVLYNLETLL LSHCIFLKEL PLHMEKLINL RHLDISEGRL ETLPHPSKLK SLDVLVGAKF LLTGRGGLRM EDLGELHNLY GSLSILELQH
0501: VVDRRESLKA NMRKKEHVER LSLKWSGSFA DNSQTESDIL DELQPNTNIK EVNIDGYRGT KFPNWLADHS FHKLIEVSLS YCKDCDSLPA LGQLPCLKFL
0601: TIRGMRQITE VTEEFYGSLS STKPFNSLEK LQFALMPEWK QWHVLGKGEF PVLEELSIDG CPKLIGKLPE NLSSLRSLRI SKCPELSLET PIQLEGMKQI
0701: VELVITDCKS LTSLPISILP STLKRIRISG CGELKLESSM NTMFLGELSL VGCDSSELFP RARNLNVSSC HNLNRLLVPI ATETLSIRDC ENLEILSVAC
0801: GTQMTSLHIY NCKKLKSLPE HMQELLPSLK VLDIRNCPEI ESFPEGGLPF NLQRLQIDYC KKLVNGRKEW HLQRLPCLRN LTIYHDGTDL SGEKWELPCS
0901: IRSLAISNLK TLSSQLLKCL TSLEFLYARK LPQIQSLLEE GLPSSLSELK LFSNHDLHSL PIEGLQRLTW LRRLEIWECP NLQSLPELGL PSSLSVLCIW
1001: NCSNLQSLPK SGLPSSLSVL CISGCLLLKP LLEFNKGEYW PKIAHIPTID IDGEYQ

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.