Factsheet for PGSC0003DMT400007707

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
extracellular 2
cytosol 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g071420.1.1	Tomato	nucleus	75.3	77.67
Solyc08g007630.1.1	Tomato	plasma membrane	59.5	75.1
PGSC0003DMT400018940	Potato	endoplasmic reticulum, extracellular	71.93	70.63
PGSC0003DMT400024448	Potato	cytosol	69.61	69.38
PGSC0003DMT400077717	Potato	cytosol	57.26	67.61
PGSC0003DMT400050640	Potato	cytosol	69.53	65.58
PGSC0003DMT400070503	Potato	plasma membrane	65.84	63.99
PGSC0003DMT400035672	Potato	extracellular, plasma membrane	50.76	46.96
VIT_12s0034g01660.t01	Wine grape	extracellular	27.91	37.74
VIT_13s0067g01100.t01	Wine grape	extracellular	28.07	37.31
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	33.28	35.87
VIT_12s0034g01070.t01	Wine grape	cytosol	25.9	35.57
VIT_12s0121g00060.t01	Wine grape	cytosol	32.88	35.13
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	37.61	34.51
KRH65531	Soybean	cytosol	9.86	34.45
VIT_12s0034g02500.t01	Wine grape	extracellular	37.85	34.35
VIT_12s0121g00050.t01	Wine grape	cytosol	35.36	34.27
AT3G14470.1	Thale cress	endoplasmic reticulum	28.95	34.25
KRH65557	Soybean	cytosol	21.33	34.19
Bra027332.1-P	Field mustard	extracellular	28.55	34.17
KRH20671	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.4	34.01
KRH20599	Soybean	extracellular, plasma membrane	32.16	33.95
KRH13312	Soybean	cytosol	13.47	33.94
KRH28145	Soybean	cytosol	22.61	33.85
KRH13317	Soybean	extracellular	32.64	33.72
KRH65458	Soybean	extracellular, plasma membrane	33.12	33.71
KRH45935	Soybean	endoplasmic reticulum, extracellular	17.4	33.64
CDX98463	Canola	endoplasmic reticulum	24.06	33.52
KRH65539	Soybean	cytosol	32.24	33.47
KRG89748	Soybean	nucleus	33.76	33.47
KRH20688	Soybean	plasma membrane	32.8	33.44
KRH20659	Soybean	extracellular, plasma membrane	33.04	33.44
VIT_13s0106g00020.t01	Wine grape	cytosol	34.32	33.44
KRH13352	Soybean	extracellular	31.03	33.42
KRH65416	Soybean	extracellular, plasma membrane	32.72	33.39
KRH65453	Soybean	extracellular, plasma membrane	33.36	33.39
KRH65454	Soybean	extracellular, plasma membrane	33.44	33.39
KRH65421	Soybean	extracellular, vacuole	32.56	33.36
KRH65483	Soybean	extracellular, plasma membrane	33.28	33.25
KRH18623	Soybean	cytosol	26.3	33.2
KRG89841	Soybean	cytosol	32.96	33.17
KRH13358	Soybean	extracellular	32.0	33.14
KRG89840	Soybean	cytosol, endoplasmic reticulum	16.6	33.12
KRH65423	Soybean	extracellular, plasma membrane	33.04	33.04
KRH65481	Soybean	extracellular, plasma membrane	31.68	33.0
KRH13356	Soybean	extracellular	20.05	32.98
KRH13321	Soybean	cytosol	31.03	32.94
KRG89749	Soybean	cytosol	33.2	32.91
KRH65544	Soybean	cytosol	31.68	32.89
KRH18620	Soybean	cytosol	32.32	32.61
KRH65543	Soybean	nucleus	30.55	32.48
KRH65561	Soybean	extracellular, plasma membrane	32.4	32.48
KRH55423	Soybean	plasma membrane	31.36	32.48
KRH65991	Soybean	plasma membrane	32.32	32.47
KRH13258	Soybean	extracellular	32.0	32.36
PGSC0003DMT400012949	Potato	extracellular	36.01	32.35
KRH65554	Soybean	cytosol	17.88	31.95
KRH56350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.19	31.92
KRH65580	Soybean	plasma membrane	31.19	31.91
KRH65418	Soybean	extracellular, plasma membrane	27.51	31.88
KRH13327	Soybean	extracellular	28.39	31.86
KRH13325	Soybean	cytosol	23.74	31.86
KRH65538	Soybean	cytosol	31.6	31.83
KRH20627	Soybean	extracellular, plasma membrane	30.55	31.72
KRH65534	Soybean	cytosol	30.47	31.72
KRH20675	Soybean	cytosol	22.13	31.58
KRH20538	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.84	31.43
KRH65572	Soybean	nucleus	26.86	31.4
KRH65486	Soybean	cytosol	24.78	31.15
CDX97580	Canola	extracellular, plasma membrane	24.62	30.58
KRH65532	Soybean	cytosol	21.25	30.49
VIT_13s0067g02430.t01	Wine grape	extracellular	35.53	30.32
KRH76052	Soybean	endoplasmic reticulum	29.59	30.25
KRH20633	Soybean	extracellular	30.95	30.16
KRH13323	Soybean	cytosol	24.14	30.07
VIT_13s0067g02580.t01	Wine grape	extracellular	34.96	29.64
GSMUA_Achr9P11390_001	Banana	extracellular	22.53	29.09
GSMUA_Achr6P32070_001	Banana	cytosol	24.62	27.96
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	27.43	27.8
KRH13355	Soybean	plastid	31.28	27.8
KXG34889	Sorghum	cytosol	21.65	27.78
Zm00001d019356_P001	Maize	cytosol	21.09	27.42
Os04t0512900-01	Rice	nucleus	16.28	27.03
GSMUA_Achr10P...	Banana	cytosol, golgi	15.88	26.54
Os01t0308300-00	Rice	plastid	22.93	26.48
EES11060	Sorghum	nucleus	20.29	26.33
OQU91451	Sorghum	cytosol, mitochondrion	22.93	26.05
GSMUA_Achr10P...	Banana	nucleus	23.66	25.99
Os07t0273900-01	Rice	cytosol	15.0	25.9
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	20.21	25.85
Os07t0273600-01	Rice	mitochondrion	8.98	25.69
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	20.85	25.27
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	15.72	25.06
OQU91449	Sorghum	mitochondrion	15.08	24.23
Os03t0579900-01	Rice	cytosol	4.25	22.84
Os03t0579200-00	Rice	cytosol	21.09	21.11
KRH20628	Soybean	extracellular	31.76	18.01

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0ZTE2	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400002980	PGSC:PGSC0003DMG400002980	EnsemblPlants:PGSC0003DMT400007707
PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF414	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI00029681DA
SEG:seg	:	:	:	:	:

Description

Disease resistance protein R3a [Source:PGSC_GENE;Acc:PGSC0003DMG400002980]

Coordinates

chr11:-:43510805..43514663

Molecular Weight (calculated)

140987.0 Da

IEP (calculated)

5.428

GRAVY (calculated)

-0.158

Length

1247 amino acids

Sequence
(BLAST)

0001: MEVVGGAFLS SALNVLFDRL VSHGDLLNMF RKHKDHVQLL HKLQDNLLGL QIVLSDAEKK QASNRHVSQW FNKLQSAVDG AENLIEHVNY EALRLKVEGQ
0101: DQNLAETSNK QVSDLNLCLS DDFFLNIKEK LEETIETLEV LEKQIGRLGL KDHFGSTKQE TRTPSTSLVD DSDIFGRQND IEDLINRLLA EDASGKKLTV
0201: VPIVGMGGVG KTTLAKAVYN DEKVKDHFGL KAWFCVSEAY DAFRITKGLL QEIDSFDLKA DDNLNQLQVK LKESLKGKRF LIVLDDVWND NYSEWDDLRN
0301: VFVQGDIGSK IIVTTRKESV SLMMGSGAIT VGTLSDEISW DLFKRHSLEN RDPKEHPELE EIGKQIADKC KGLPLALKAL AGVLRCKSEQ CFAYCAIYPK
0401: DYQFWKDQII HLWIANGLVQ QLQSGNQYFL ELRSRSLFER VPESEWRQEV FLMHDLVNDL AQIASSNLCI RLEENKGLHI LEQCRHMSYS IGKDGDFEKL
0501: KSLFKSEQLR TLLPMDLQRP DYGRSKLSKR VLHNILPRLT SLRALSLSCY QIVELPDALF IKLKLLRFLD LSGTLIKKLP DSICTLYNLE TLLLSFCVDL
0601: EELPLQMEKL INLRHLDILD TCRLKMPLHL SKMKSLHGLV GAKFLVGGPG GLRMEDLGEV HNLYESLSVV ELQNVVDRRE AVKAKMWEKN HVGQLSLEWS
0701: ESSSANNSQT ERDIVDELRP HKNIKEVEIS GYRGLTFPNW LADLLFLKLV KLSLSYCKVC YSLPALGQLP CLKILSIKGM HGITEVTEEF YGSLSSKKPF
0801: NCLEEISFED MPEWKQWHVP GNGEFPILEK LSIINCPELS LETPIQLSSL KWFEVSGCPK VGVVFDDAQL LRSQLEGMKQ IEVLYIGDCK SLTFFPFSIL
0901: PTTLKNIWIS GCRKLKLEQP VGEMSMFLEN LRLDGCNCID DISPELIPSA HTLNVSNCDN LTRFLIPTAT ESLFIRNCEN VEKLSVACGG TQMTYLYIDD
1001: CSKLKWLPER MQELLPSLKE LQLINCPEIE SFPQGGLPFN LQQLAINNCT KLVNGRKEWH LQRLPCLTQL IISHDGSDEE IVGGENWELP SSIQTLIINN
1101: LKTLSSQVLK SLTSLQYLCI KGNLPQIQSM LEQGQFSSLQ SLHIEDIPNL QSLSESALPS SLSQLTIINC PNLQSLPESA LPSSLSQLEI SHCPNLQSLP
1201: VKGMPSSLST LSISKCPLLT PLLEFVKGKY WPEIAHFPTI EIDEECL

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.