Factsheet for Os04t0512900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11060	Sorghum	nucleus	60.32	47.14
Os07t0273600-01	Rice	mitochondrion	27.16	46.79
Os07t0273900-01	Rice	cytosol	43.28	45.01
Os05t0492600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.76	32.01
VIT_07s0141g00700.t01	Wine grape	cytosol	33.82	29.47
KRG89840	Soybean	cytosol, endoplasmic reticulum	24.37	29.28
VIT_13s0139g00070.t01	Wine grape	cytosol	32.62	28.03
KRH65531	Soybean	cytosol	13.18	27.73
KRH13356	Soybean	extracellular	27.96	27.7
KRH65557	Soybean	cytosol	28.5	27.51
Os05t0414200-01	Rice	cytosol	15.05	26.4
Os05t0414300-02	Rice	cytosol	22.64	26.28
VIT_13s0067g01100.t01	Wine grape	extracellular	31.42	25.16
KRH45935	Soybean	endoplasmic reticulum, extracellular	21.57	25.12
VIT_12s0034g01660.t01	Wine grape	extracellular	30.09	24.51
CDX98462	Canola	cytosol, plastid	26.36	24.41
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	31.69	24.41
KRH13312	Soybean	cytosol	15.71	23.84
KRH28145	Soybean	cytosol	26.36	23.77
Solyc08g007630.1.1	Tomato	plasma membrane	29.69	22.57
Solyc02g084450.2.1	Tomato	cytosol, endoplasmic reticulum	26.5	22.46
Bra027332.1-P	Field mustard	extracellular	30.89	22.26
KRH65418	Soybean	extracellular, plasma membrane	31.82	22.21
AT3G14470.1	Thale cress	endoplasmic reticulum	30.89	22.01
Os05t0492200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.69	21.17
VIT_13s0158g00260.t01	Wine grape	endoplasmic reticulum	32.89	21.11
GSMUA_Achr6P32070_001	Banana	cytosol	30.36	20.77
KRH65572	Soybean	nucleus	29.29	20.62
Os03t0324600-01	Rice	cytosol	29.29	20.5
CDX97580	Canola	extracellular, plasma membrane	27.3	20.42
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	27.83	20.31
KRH13327	Soybean	extracellular	29.96	20.25
VIT_13s0084g00420.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.29	20.18
KRH65421	Soybean	extracellular, vacuole	32.62	20.13
CDX98463	Canola	endoplasmic reticulum	23.97	20.11
KRH65481	Soybean	extracellular, plasma membrane	31.96	20.05
KRH13321	Soybean	cytosol	31.16	19.91
KRH65416	Soybean	extracellular, plasma membrane	32.36	19.89
KRH65458	Soybean	extracellular, plasma membrane	32.36	19.84
Os01t0308300-00	Rice	plastid	28.36	19.72
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	30.36	19.71
KRH65561	Soybean	extracellular, plasma membrane	32.62	19.69
KRH55423	Soybean	plasma membrane	31.56	19.68
KRH65453	Soybean	extracellular, plasma membrane	32.36	19.5
KRH65539	Soybean	cytosol	31.16	19.48
KRH65483	Soybean	extracellular, plasma membrane	32.36	19.47
KRH13317	Soybean	extracellular	31.29	19.47
VIT_13s0084g00360.t01	Wine grape	plasma membrane	34.22	19.37
KRH65423	Soybean	extracellular, plasma membrane	32.09	19.33
KRH13358	Soybean	extracellular	30.89	19.27
Os03t0579200-00	Rice	cytosol	31.96	19.26
KRH20659	Soybean	extracellular, plasma membrane	31.56	19.24
KRH20599	Soybean	extracellular, plasma membrane	30.23	19.22
KRH65454	Soybean	extracellular, plasma membrane	31.96	19.22
KRH20671	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.09	19.02
Os04t0111900-02	Rice	cytosol, mitochondrion	27.83	19.02
KRH18620	Soybean	cytosol	31.29	19.01
KRH65580	Soybean	plasma membrane	30.63	18.87
KRH65534	Soybean	cytosol	30.09	18.86
VIT_13s0019g01950.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.09	18.8
KRH13352	Soybean	extracellular	28.89	18.74
KRH13258	Soybean	extracellular	30.76	18.73
KRH65544	Soybean	cytosol	29.83	18.65
KRH20688	Soybean	plasma membrane	30.36	18.64
KRH76052	Soybean	endoplasmic reticulum	30.23	18.61
KRH65538	Soybean	cytosol	30.63	18.58
VIT_13s0158g00210.t01	Wine grape	endoplasmic reticulum	33.29	18.55
VIT_07s0141g01030.t01	Wine grape	cytosol	33.29	18.52
KRH13325	Soybean	cytosol	22.9	18.51
VIT_13s0084g00510.t01	Wine grape	cytosol	28.5	18.48
KRH65991	Soybean	plasma membrane	30.49	18.45
KRH20627	Soybean	extracellular, plasma membrane	29.43	18.4
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	33.29	18.4
VIT_13s0019g01140.t01	Wine grape	cytosol	32.36	18.38
KRH65543	Soybean	nucleus	28.63	18.33
VIT_13s0067g03590.t01	Wine grape	cytosol	31.42	18.28
KRH20538	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.63	18.21
VIT_12s0121g00050.t01	Wine grape	cytosol	31.16	18.18
KRH20633	Soybean	extracellular	30.89	18.12
VIT_00s0467g00030.t01	Wine grape	cytosol	30.89	17.93
VIT_12s0034g02500.t01	Wine grape	extracellular	32.76	17.9
Solyc11g071420.1.1	Tomato	nucleus	28.76	17.87
VIT_13s0158g00010.t01	Wine grape	mitochondrion	27.16	17.86
VIT_00s0467g00010.t01	Wine grape	extracellular	30.36	17.76
Solyc11g069620.1.1	Tomato	extracellular	29.56	17.75
VIT_13s0139g00210.t01	Wine grape	cytosol, mitochondrion	33.02	17.69
Os06t0619000-01	Rice	cytosol	27.56	17.68
KRG89841	Soybean	cytosol	29.03	17.59
KRG89748	Soybean	nucleus	29.43	17.57
KRG89749	Soybean	cytosol	29.43	17.57
VIT_12s0121g00060.t01	Wine grape	cytosol	27.16	17.48
PGSC0003DMT400050640	Potato	cytosol	30.63	17.4
PGSC0003DMT400024448	Potato	cytosol	28.76	17.27
KRH56350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.37	17.23
VIT_13s0139g00220.t01	Wine grape	plasma membrane	32.62	17.18
Os04t0112100-01	Rice	cytosol, plastid	7.72	17.11
CDX97579	Canola	cytosol	29.03	17.0
PGSC0003DMT400070503	Potato	plasma membrane	29.03	16.99
VIT_19s0085g00440.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.62	16.95
KRH13246	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.82	16.84
VIT_13s0158g00290.t01	Wine grape	plasma membrane, plastid	31.16	16.82
PGSC0003DMT400018940	Potato	endoplasmic reticulum, extracellular	28.23	16.69
KRH13323	Soybean	cytosol	22.1	16.58
VIT_13s0106g00020.t01	Wine grape	cytosol	28.23	16.56
VIT_13s0101g00300.t01	Wine grape	extracellular	31.42	16.42
VIT_13s0067g03570.t01	Wine grape	cytosol	26.76	16.41
VIT_13s0047g00950.t01	Wine grape	cytosol	31.29	16.36
Solyc03g078300.1.1	Tomato	extracellular, nucleus, plasma membrane	29.16	16.33
PGSC0003DMT400007707	Potato	cytosol, extracellular, nucleus	27.03	16.28
KRH13355	Soybean	plastid	30.36	16.25
PGSC0003DMT400035672	Potato	extracellular, plasma membrane	29.16	16.25
PGSC0003DMT400012949	Potato	extracellular	29.96	16.21
KRH65486	Soybean	cytosol	21.3	16.13
VIT_13s0067g02580.t01	Wine grape	extracellular	31.56	16.11
VIT_13s0067g02430.t01	Wine grape	extracellular	31.16	16.02
KRH18623	Soybean	cytosol	20.91	15.89
AT3G14460.1	Thale cress	cytosol	29.83	15.73
Bra027333.1-P	Field mustard	cytosol	29.43	15.68
VIT_12s0034g01070.t01	Wine grape	cytosol	18.77	15.53
KRH20675	Soybean	cytosol	17.98	15.45
PGSC0003DMT400077717	Potato	cytosol	21.57	15.34
VIT_13s0047g01010.t01	Wine grape	cytosol	18.38	14.84
VIT_13s0047g00730.t01	Wine grape	cytosol	21.97	14.44
VIT_00s0276g00050.t01	Wine grape	cytosol	19.31	14.31
KRH65532	Soybean	cytosol	16.25	14.04
VIT_13s0047g00740.t01	Wine grape	nucleus	12.25	13.9
VIT_13s0074g00130.t01	Wine grape	cytosol, nucleus, peroxisome	19.71	13.62
Os06t0667900-00	Rice	plasma membrane	21.17	13.52
VIT_18s0041g00270.t01	Wine grape	cytosol	19.04	13.31
VIT_13s0019g00380.t01	Wine grape	cytosol	33.29	10.88
KRH20628	Soybean	extracellular	30.89	10.55
VIT_13s0139g00130.t01	Wine grape	cytosol	34.09	9.71
VIT_13s0064g00060.t01	Wine grape	plasma membrane	31.82	9.43
KRH65554	Soybean	cytosol	8.39	9.03
Os01t0178900-01	Rice	cytosol	0.27	0.38
Os03t0566700-01	Rice	cytosol, extracellular	0.0	0.0
Os03t0579900-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:BAF15214.1	ProteinID:BAS90054.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	EnsemblPlantsGene:Os04g0512900	EnsemblPlants:Os04t0512900-01	InterPro:P-loop_NTPase
PFAM:PF00931	PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF600	UniProt:Q0JBS3	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0000DD918E	SEG:seg	:	:	:

Description

NB-ARC domain containing protein. (Os04t0512900-01)

Coordinates

chr4:-:25633375..25636818

Molecular Weight (calculated)

85371.6 Da

IEP (calculated)

7.371

GRAVY (calculated)

-0.315

Length

751 amino acids

Sequence
(BLAST)

001: MARCGGERMV DELRDVLDDF AFRAKRLAAP LLQPFGRASE AVALDGAEID GLRRIRAALR AAEERVVTDD FVRLWLRELE DLERMAEDVL EELEFEALRA
101: SRLERFKLQL LRSSAGKRKR ELSSLFSSSP DRLNRKIGKI MERYNDLARD RDALRLRSSD EERRREPSPL TPTSCLTKCS LHGRERDKKQ VIKLLLSDEY
201: NCQGVYSVVP IVGAAGVGKT SLVQHIYNDE ALRSKFDMKM WVWVCQEFDV LKLTRKLAEE ATESPCGFAE MNQLHRIIAK RLEGKRFLLV LDDVWDESLL
301: RWTSLLVPLK SAAPGSRIVV TTRSAKVARM MAFKIHQLGY LTDTTCWSVC RNAALQDRDP SIIDDGLISI GKSVAAKCKG LPLAANAAGS VLSIAIDRKH
401: WETVEQSDLW ANNEVIDHTL PALLVSYNSL QKPLKHCFSY CSLFPKEYVF RKDKLVRLWL AQGFAAADGE SDAEDIACRY FHNLVERFFL QQSPSYDHNE
501: QRYVMHDLYH ELAEYVAADE YSRIERFTLS NVNGEARHLS LTPSETHSHE IGEFHASNNK YMNESQYPGL RTLLVVQRTK HDDGRKTSSI QKPSVLFKAF
601: VCLRALDLSN TDMEGLPNSI GELIHLRYLS LENTKIKCLP ESISSLFKLH TMNLKCCNYL SELPQGIKFL ANLRHLELPR IDNWNVYMPC GISELTNLQT
701: MHTIKFTSDS GSCGIADLVN LDNLRGELCI SGIENVSKEQ IATEAIMKNK G

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.