Subcellular Localization
min:
: max
Winner_takes_all: cytosol, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 2
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| endoplasmic reticulum:
29145071
|
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0273900-01 | Rice | cytosol | 21.78 | 26.73 |
| Os04t0512900-01 | Rice | nucleus | 22.46 | 26.5 |
| Zm00001d019356_P001 | Maize | cytosol | 28.22 | 26.07 |
| KXG34889 | Sorghum | cytosol | 28.56 | 26.03 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 27.77 | 25.47 |
| Solyc08g007630.1.1 | Tomato | plasma membrane | 28.1 | 25.2 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 26.64 | 24.21 |
| Os07t0273600-01 | Rice | mitochondrion | 11.85 | 24.08 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.46 | 23.77 |
| EES11060 | Sorghum | nucleus | 25.73 | 23.73 |
| OQU91449 | Sorghum | mitochondrion | 20.2 | 23.07 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 19.3 | 22.92 |
| Os09t0314200-00 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole | 26.52 | 22.84 |
| Os01t0308300-00 | Rice | plastid | 26.75 | 21.94 |
| GSMUA_Achr10P... | Banana | nucleus | 27.43 | 21.41 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 18.85 | 21.36 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 29.46 | 21.22 |
| Solyc11g071420.1.1 | Tomato | nucleus | 28.56 | 20.93 |
| Solyc03g078300.1.1 | Tomato | extracellular, nucleus, plasma membrane | 31.6 | 20.88 |
| OQU91451 | Sorghum | cytosol, mitochondrion | 25.06 | 20.22 |
| Solyc11g069620.1.1 | Tomato | extracellular | 28.22 | 19.98 |
| Os03t0579200-00 | Rice | cytosol | 26.41 | 18.78 |
| Os03t0579900-01 | Rice | cytosol | 0.68 | 2.59 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0043531 |
| InterPro:IPR001611 | InterPro:IPR032675 | UniProt:K4BAW1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PFscan:PS51450 |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF884 | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc02g084450.2 |
| EnsemblPlants:Solyc02g084450.2.1 | UniParc:UPI0002768A75 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:+:47542047..47544791
Molecular Weight (calculated)
100855.0 Da
IEP (calculated)
6.589
GRAVY (calculated)
0.045
Length
886 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEDFRAGFA SYTFSLLFAN FTEFAIDEVS KILNVSTELR KLDRMFLKLQ GMVYRMECSR AYLWDSTHYK SSIAWVEEAN GLIYHISDIL EDISLNLGLR
101: EGEKLVNGNL LIDKFLLLIP RKISGIVEDL EDLIKEMGTD FLVDLVKQVP KVVATKQCCG FAGLSNPTHT IGRESQIEKV VEILTQNDVP LCITGMAGIG
201: KTVFTHCLCE NKEVKKAFPL LLWVSVSAEF ELVRILRAAI ESVSKESCYL TDLNVLRYTL QELLLSGDNF LVVLDDLCVE DLEDWNLLYA AFKVESKSSR
301: LVFTTRNSKV ASFIGAKMFC LQPLSDEDCW KIIKQRPFIN NKMHNLDVIG LEIAKKCKGV PLVAKTIGDI LHCLPVNEWD SLVKGNLWDL PQIENHVFPI
401: FLLSYCCLPQ HIKKCFSYCC LFPPEYVYKM KDIVLLWMAE GLIHPIDGRR IEDIGQEYFE ELVWGSLFNS GNEYFHDFDG SYTMHEFNHH VAASVSSSIC
501: QRIKDNQSSY SFDRVRHLSI CHGNTQSNGL HSFSKCHNLR TFTLLCATNI GPNVPTFFKN FKVIRVLNLK CGGITEIPEI VGNLKHLRYL DLSSNNISTL
601: PSSLCELSLL QVLILENCTS LMCLPDKFSR LTNLRHLFFD VKHQIHQMPV NFRFLKELQT LNAFVVEAEN GHTIEELEDL NSLTGSFSLI GLENILNGQS
701: AATANLNKKQ GIIELELQWR SHHERNIEYE ISTGLQPHKN LERLVISDYR GTTFPSWLCY RPHYMLRSIY LRNCECCKVL PPLGKLQFLE SLTIENMTLL
801: VVVFPSLVDL GVFPSLKSLV FSTMPQLIGW GSGEYDMPQL TDLKFYTCPK LKKLKNAKDL IGCHLVQLLW KVSSSGIVQP SVTVAR
101: EGEKLVNGNL LIDKFLLLIP RKISGIVEDL EDLIKEMGTD FLVDLVKQVP KVVATKQCCG FAGLSNPTHT IGRESQIEKV VEILTQNDVP LCITGMAGIG
201: KTVFTHCLCE NKEVKKAFPL LLWVSVSAEF ELVRILRAAI ESVSKESCYL TDLNVLRYTL QELLLSGDNF LVVLDDLCVE DLEDWNLLYA AFKVESKSSR
301: LVFTTRNSKV ASFIGAKMFC LQPLSDEDCW KIIKQRPFIN NKMHNLDVIG LEIAKKCKGV PLVAKTIGDI LHCLPVNEWD SLVKGNLWDL PQIENHVFPI
401: FLLSYCCLPQ HIKKCFSYCC LFPPEYVYKM KDIVLLWMAE GLIHPIDGRR IEDIGQEYFE ELVWGSLFNS GNEYFHDFDG SYTMHEFNHH VAASVSSSIC
501: QRIKDNQSSY SFDRVRHLSI CHGNTQSNGL HSFSKCHNLR TFTLLCATNI GPNVPTFFKN FKVIRVLNLK CGGITEIPEI VGNLKHLRYL DLSSNNISTL
601: PSSLCELSLL QVLILENCTS LMCLPDKFSR LTNLRHLFFD VKHQIHQMPV NFRFLKELQT LNAFVVEAEN GHTIEELEDL NSLTGSFSLI GLENILNGQS
701: AATANLNKKQ GIIELELQWR SHHERNIEYE ISTGLQPHKN LERLVISDYR GTTFPSWLCY RPHYMLRSIY LRNCECCKVL PPLGKLQFLE SLTIENMTLL
801: VVVFPSLVDL GVFPSLKSLV FSTMPQLIGW GSGEYDMPQL TDLKFYTCPK LKKLKNAKDL IGCHLVQLLW KVSSSGIVQP SVTVAR
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.