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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus, plasma membrane
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:extracellular
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400035672 Potato extracellular, plasma membrane 94.85 94.36
Solyc08g007630.1.1 Tomato plasma membrane 39.37 53.44
Solyc11g071420.1.1 Tomato nucleus 45.34 50.29
Solyc11g069620.1.1 Tomato extracellular 45.26 48.52
VIT_12s0034g01660.t01 Wine grape extracellular 28.56 41.54
VIT_13s0067g01100.t01 Wine grape extracellular 27.82 39.77
VIT_12s0034g01070.t01 Wine grape cytosol 26.77 39.54
Bra027332.1-P Field mustard extracellular 30.57 39.35
AT3G14470.1 Thale cress endoplasmic reticulum 30.35 38.61
KRH65557 Soybean cytosol 22.3 38.43
VIT_12s0121g00060.t01 Wine grape cytosol 33.03 37.96
KRH28145 Soybean cytosol 23.56 37.94
CDX98463 Canola endoplasmic reticulum 25.06 37.54
VIT_13s0064g01850.t01 Wine grape cytosol, extracellular, nucleus, plastid 32.29 37.42
KRH20671 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 33.11 37.37
KRH65531 Soybean cytosol 9.92 37.25
KRH20599 Soybean extracellular, plasma membrane 32.59 37.0
VIT_12s0121g00050.t01 Wine grape cytosol 35.35 36.83
KRH18623 Soybean cytosol 27.07 36.74
KRH65539 Soybean cytosol 32.81 36.64
KRH18620 Soybean cytosol 33.71 36.57
KRH13312 Soybean cytosol 13.5 36.57
KRH13356 Soybean extracellular 20.58 36.41
KRH65544 Soybean cytosol 32.59 36.39
KRG89840 Soybean cytosol, endoplasmic reticulum 16.93 36.32
KRH20688 Soybean plasma membrane 32.96 36.14
KRH20659 Soybean extracellular, plasma membrane 33.18 36.12
KRG89748 Soybean nucleus 33.86 36.09
KRH65421 Soybean extracellular, vacuole 32.74 36.07
KRG89749 Soybean cytosol 33.78 36.01
VIT_12s0034g02310.t01 Wine grape extracellular, plasma membrane 36.39 35.91
KRG89841 Soybean cytosol 33.03 35.75
VIT_12s0034g02500.t01 Wine grape extracellular 36.61 35.74
KRH65538 Soybean cytosol 32.89 35.62
KRH65458 Soybean extracellular, plasma membrane 32.51 35.59
KRH65483 Soybean extracellular, plasma membrane 33.03 35.5
KRH65454 Soybean extracellular, plasma membrane 33.03 35.47
KRH65561 Soybean extracellular, plasma membrane 32.81 35.37
KRH20675 Soybean cytosol 23.04 35.35
KRH65481 Soybean extracellular, plasma membrane 31.54 35.34
KRH13317 Soybean extracellular 31.77 35.29
CDX97580 Canola extracellular, plasma membrane 26.4 35.26
KRH65416 Soybean extracellular, plasma membrane 31.99 35.11
KRH65453 Soybean extracellular, plasma membrane 32.59 35.07
KRH20627 Soybean extracellular, plasma membrane 31.39 35.05
KRH65572 Soybean nucleus 27.89 35.05
KRH65534 Soybean cytosol 31.25 34.98
KRH65423 Soybean extracellular, plasma membrane 32.51 34.96
KRH65543 Soybean nucleus 30.57 34.95
KRH45935 Soybean endoplasmic reticulum, extracellular 16.78 34.88
KRH55423 Soybean plasma membrane 31.32 34.88
KRH65418 Soybean extracellular, plasma membrane 27.96 34.85
KRH65991 Soybean plasma membrane 32.21 34.81
KRH13321 Soybean cytosol 30.5 34.81
KRH13352 Soybean extracellular 30.05 34.8
KRH13358 Soybean extracellular 31.25 34.8
KRH65580 Soybean plasma membrane 31.62 34.78
KRH65486 Soybean cytosol 25.73 34.78
KRH13325 Soybean cytosol 24.09 34.77
KRH65532 Soybean cytosol 22.45 34.64
KRH13258 Soybean extracellular 31.54 34.31
KRH56350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 26.85 33.9
KRH20538 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 31.92 33.89
KRH76052 Soybean endoplasmic reticulum 30.8 33.85
VIT_13s0106g00020.t01 Wine grape cytosol 32.14 33.67
KRH13327 Soybean extracellular 27.82 33.57
KRH65554 Soybean cytosol 17.45 33.52
KRH20633 Soybean extracellular 31.02 32.5
Solyc02g084450.2.1 Tomato cytosol, endoplasmic reticulum 20.88 31.6
KRH13323 Soybean cytosol 23.56 31.57
GSMUA_Achr9P11390_001 Banana extracellular 22.67 31.47
VIT_13s0067g02580.t01 Wine grape extracellular 34.08 31.07
VIT_13s0067g02430.t01 Wine grape extracellular 33.71 30.94
GSMUA_Achr6P32070_001 Banana cytosol 25.21 30.78
KRH13355 Soybean plastid 31.17 29.79
GSMUA_Achr10P... Banana cytosol, golgi 16.26 29.22
Os04t0512900-01 Rice nucleus 16.33 29.16
Zm00001d019356_P001 Maize cytosol 20.81 29.09
GSMUA_Achr6P32040_001 Banana cytosol, extracellular, nucleus, plastid 26.55 28.94
GSMUA_Achr8P21580_001 Banana cytosol, plastid 21.03 28.92
OQU91449 Sorghum mitochondrion 16.7 28.87
Os09t0314200-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole 22.0 28.67
OQU91451 Sorghum cytosol, mitochondrion 23.42 28.6
EES11060 Sorghum nucleus 20.43 28.51
KXG34889 Sorghum cytosol 20.51 28.29
Os01t0308300-00 Rice plastid 22.67 28.15
GSMUA_Achr10P... Banana nucleus 23.79 28.11
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion 16.26 27.88
Os07t0273900-01 Rice cytosol 14.39 26.73
Os07t0273600-01 Rice mitochondrion 7.98 24.54
Os03t0579200-00 Rice cytosol 22.0 23.68
Os03t0579900-01 Rice cytosol 3.73 21.55
KRH20628 Soybean extracellular 32.29 19.69
Protein Annotations
Gene3D:1.10.8.430Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006950
GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016020
GO:GO:0043531InterPro:IPR032675UniProt:K4BHQ9InterPro:LRR_dom_sfInterPro:NB-ARCInterPro:P-loop_NTPase
PFAM:PF00931PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF414SUPFAM:SSF52058SUPFAM:SSF52540
EnsemblPlantsGene:Solyc03g078300.1EnsemblPlants:Solyc03g078300.1.1UniParc:UPI0002767FA1SEG:seg::
Description
No Description!
Coordinates
chr3:+:50341264..50345289
Molecular Weight (calculated)
152218.0 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.102
Length
1341 amino acids
Sequence
(BLAST)
0001: MDIGLTVGGA FLSSTLQVLF DRLTPQCDFL NLFRGRRQDQ RLLKKLHTNL LALRAVVHHI EIQQICDEDI RTWLNQLQDA VDTADNLLDE ISYEVLRVSG
0101: EETSRFCYLD SMMPKLEETI ETLQDLETQI NCLTITLKAQ LVTGKKDSPK RLPSTSLVDE SGVFGRHQEV EEIISKLLSS DDDAHGSGDV VPIVGLGGVG
0201: KTTLARAVYN DKRIKQHFNI TAWVCVSEEY DAFRITTTLL GEIIGSLDSK VSASNLNQLQ IKLSHRLKGK RFLFVLDDVW NENYTDWDEL RCPFVHGRKG
0301: SRIILTTRKQ SVAMMMASEM IQLKSLSDED CWSLFKTHSF ENRDPNKYPE LEVVGRQIVG KCKGLPLAVK TLAGLLRSKS TIEEWERLLQ SEIWELPSDI
0401: LPVLKLSYND LSQVLKRCFA YCALFPKDHP FGRDEVVQLW IANGLITQGE SDETIEDTGN QYFLELRSRS LIQKASDLNL LKWEARDVFL MHDLVNDLAQ
0501: VVSAKLCLRL EDYPRTHILK RVRHLSYLRD CYGEFDKFKS LSGLEYLRTL IPVRINFYSF LSKKVVYDIL PTLTSLRALS LSGYQNNEFP DALFINMKHL
0601: RYLDFSRTKI TKIPDSVCTL YNLQTLLLLN CWGLVELPPE MGRLINLRHL DIRGTGISWN IPLQKSKLQI LLLSYSTRFV VGAFSDSRIE ELGELQNLHG
0701: SLSISELQNV VNGREAIKGN MKDKKHLEEL SLSWSGINAD DSQIEREILD KLKPDKNIKK LEINGYRGTK FPDWLGDHSF SKLVSLNLRK CRDCDSLPAL
0801: GQLPSLKHLS VSGMHRILQL TQEFYGSVSS VPPFRALTNL VFKQMPELIE WHVLENGSFP QLKHLDLINC PKLIGELPKS LPFLATLRIS GCPKLGVLPD
0901: GQVAMFGIHL SLIHQNFTSL QKLRISDMPN LVELPSEICG LTNLGELRIS NCASLRIIRI QEMQQLIELV IRNCPDLMSL TILSLPVTLE KLHISRCGKL
1001: ELEFPEDSMT GSCCNMFFEE LRLENCESLR HLPFGFSLRV HTLIVYSCRH LQTLSFPHGI DTLEVERCGN LKALTVPKGI HLKFLHSMKI SGCDNLTSFP
1101: QKLVAPNLKY LWVYDCQKLK ALPDCMHELL PSLKNLWISN CPELESFPDG GLPFNIEILD ISSCQNLITG REEWGLQRLP YLRCFRIYGS DETSILDVSW
1201: KLPQSIQTIT IEGLPRLKTL SGKALEGFKY LQVLEIKHCP QLQSLSAEGL QGLTSLATLE IEDCCQLKSL PEVGLPSSLS VLKISSCPQF LSLPKKGLPS
1301: SVCRLEINDC PLLTPRLHNK KAEDWLKIAG IHTLLIDYEL V
Best Arabidopsis Sequence Match ( AT3G14470.2 )
(BLAST)
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.