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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:cytosol, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG89749 Soybean cytosol 92.77 92.77
KRH18623 Soybean cytosol 60.1 76.52
KRH28145 Soybean cytosol 46.26 69.87
KRG89840 Soybean cytosol, endoplasmic reticulum 34.58 69.6
KRH18620 Soybean cytosol 67.01 68.2
KRG89841 Soybean cytosol 66.85 67.88
VIT_12s0121g00050.t01 Wine grape cytosol 43.88 42.89
KRH65557 Soybean cytosol 24.8 40.1
KRH65539 Soybean cytosol 38.08 39.88
KRH65481 Soybean extracellular, plasma membrane 37.92 39.85
KRH65458 Soybean extracellular, plasma membrane 38.79 39.84
KRH65483 Soybean extracellular, plasma membrane 39.11 39.42
KRH65561 Soybean extracellular, plasma membrane 38.95 39.39
KRH13356 Soybean extracellular 23.69 39.31
KRH65453 Soybean extracellular, plasma membrane 38.87 39.25
KRH65421 Soybean extracellular, vacuole 37.84 39.11
Bra027332.1-P Field mustard extracellular 32.35 39.06
KRH65423 Soybean extracellular, plasma membrane 38.71 39.05
KRH65486 Soybean cytosol 30.76 39.01
AT3G14470.1 Thale cress endoplasmic reticulum 32.59 38.9
CDX98463 Canola endoplasmic reticulum 27.66 38.88
KRH65454 Soybean extracellular, plasma membrane 38.55 38.83
KRH65991 Soybean plasma membrane 38.24 38.76
KRH65531 Soybean cytosol 10.97 38.66
KRH65544 Soybean cytosol 36.73 38.47
KRH65416 Soybean extracellular, plasma membrane 37.36 38.46
KRH65538 Soybean cytosol 37.84 38.45
KRH65543 Soybean nucleus 35.85 38.45
KRH65572 Soybean nucleus 32.11 37.86
KRH65554 Soybean cytosol 20.99 37.82
KRH20688 Soybean plasma membrane 36.73 37.78
KRH65580 Soybean plasma membrane 36.57 37.74
KRH65534 Soybean cytosol 35.85 37.65
KRH65532 Soybean cytosol 25.99 37.63
KRH20599 Soybean extracellular, plasma membrane 35.29 37.6
Solyc08g007630.1.1 Tomato plasma membrane 29.49 37.55
KRH65418 Soybean extracellular, plasma membrane 31.96 37.36
KRH20671 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.21 37.29
KRH76052 Soybean endoplasmic reticulum 35.93 37.05
KRH20627 Soybean extracellular, plasma membrane 34.98 36.64
PGSC0003DMT400077717 Potato cytosol 30.6 36.46
KRH13317 Soybean extracellular 34.98 36.45
KRH20659 Soybean extracellular, plasma membrane 35.69 36.44
KRH13321 Soybean cytosol 34.02 36.43
KRH13258 Soybean extracellular 35.69 36.42
KRH13352 Soybean extracellular 33.39 36.27
KRH55423 Soybean plasma membrane 34.66 36.21
KRH13358 Soybean extracellular 34.18 35.71
CDX97580 Canola extracellular, plasma membrane 28.46 35.66
KRH56350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.05 35.59
KRH20675 Soybean cytosol 24.72 35.58
KRH13325 Soybean cytosol 26.23 35.52
PGSC0003DMT400018940 Potato endoplasmic reticulum, extracellular 35.37 35.04
KRH20538 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 35.14 35.0
KRH13312 Soybean cytosol 13.59 34.55
KRH13327 Soybean extracellular 30.45 34.47
KRH13323 Soybean cytosol 27.42 34.47
KRH20633 Soybean extracellular 34.9 34.3
PGSC0003DMT400070503 Potato plasma membrane 34.98 34.29
Solyc11g071420.1.1 Tomato nucleus 32.59 33.91
Solyc03g078300.1.1 Tomato extracellular, nucleus, plasma membrane 36.09 33.86
Solyc11g069620.1.1 Tomato extracellular 33.62 33.81
PGSC0003DMT400007707 Potato cytosol, extracellular, nucleus 33.47 33.76
KRH13246 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 37.84 33.54
KRH45935 Soybean endoplasmic reticulum, extracellular 17.17 33.49
PGSC0003DMT400035672 Potato extracellular, plasma membrane 35.77 33.38
PGSC0003DMT400050640 Potato cytosol 34.82 33.13
PGSC0003DMT400024448 Potato cytosol 32.67 32.85
GSMUA_Achr9P11390_001 Banana extracellular 25.12 32.71
KRH13355 Soybean plastid 35.21 31.58
GSMUA_Achr6P32070_001 Banana cytosol 27.19 31.15
GSMUA_Achr6P32040_001 Banana cytosol, extracellular, nucleus, plastid 30.29 30.98
Zm00001d019356_P001 Maize cytosol 23.45 30.76
GSMUA_Achr8P21580_001 Banana cytosol, plastid 23.61 30.46
GSMUA_Achr10P... Banana cytosol, golgi 18.04 30.43
KXG34889 Sorghum cytosol 23.29 30.14
Os07t0273900-01 Rice cytosol 17.25 30.06
Os01t0308300-00 Rice plastid 25.44 29.63
Os04t0512900-01 Rice nucleus 17.57 29.43
Os09t0314200-00 Rice cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole 23.85 29.15
GSMUA_Achr10P... Banana nucleus 25.76 28.55
OQU91449 Sorghum mitochondrion 17.57 28.48
GSMUA_Achr10P... Banana cytosol, golgi, mitochondrion 17.49 28.13
EES11060 Sorghum nucleus 20.83 27.26
Os07t0273600-01 Rice mitochondrion 9.14 26.38
OQU91451 Sorghum cytosol, mitochondrion 22.97 26.32
Os03t0579200-00 Rice cytosol 22.58 22.79
KRH20628 Soybean extracellular 36.33 20.78
Os03t0579900-01 Rice cytosol 3.74 20.26
Protein Annotations
EntrezGene:100800462Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1EMBL:ACUP02012267ncoils:Coil
EnsemblPlantsGene:GLYMA_20G046100GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0009987GO:GO:0016020GO:GO:0043531InterPro:IPR032675UniProt:K7N1J0EnsemblPlants:KRG89748
ProteinID:KRG89748ProteinID:KRG89748.1InterPro:LRR_dom_sfInterPro:Leu-rich_rpt_typical-subtypInterPro:NB-ARCInterPro:P-loop_NTPase
PFAM:PF00931PRINTS:PR00364PANTHER:PTHR23155PANTHER:PTHR23155:SF672InterPro:RX-like_CCSMART:SM00369
SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000233DC02SEG:seg::
Description
hypothetical protein
Coordinates
chr20:+:8585273..8590741
Molecular Weight (calculated)
143533.0 Da
IEP (calculated)
6.173
GRAVY (calculated)
-0.170
Length
1258 amino acids
Sequence
(BLAST)
0001: MALAMVGEAL ISASVEILLD RITSAEFRDF FANRKLNVSL LDELKIKLLT LNAVLNDAEE KQITNSAVKA WLNELKDAVL DAEDLLDEIN TDSLRCKVEG
0101: EFKTFTSQVR SLLSSPFNQF YRSMNSKLEA ISRRLENFLK QIDSLGLKIV AGRVSYRKDT DRSVEYVVAR DDDKKKLLSM LFSDEDENNN HIQVLTIWGM
0201: GGLGKTTLAQ SLLNDDAVQN HFDLKAWAWV SDPFDVFKAT KAIVESATSK TCDITNFDAL RVELKNTFKD KKFLLVLDDL WNMQYHDWDQ LIAPFSCGKK
0301: GSKIIVTTRH HRIAEITRTF PIHELKILTD DNCWCILAKH AFGNQGYDKY PILAEIGRQI ATKCKGLPLA AKTLGGLLRS NVDAEYWNGI LNSNMWANNE
0401: VLAALCISYL HLPPHLKRCF AYCSIFPRQY LLDRKELILL WMAEGFLPQI HGEKAMESIG EDYFNELLSR SLIEKDKNEG KEQFQMHDLI YNLARLVSGK
0501: RSCYFEGGEV PLNVRHLTYP QREHDASKRF ECLYELKFLR SFLPLYGYGS YPYCVSKKVT HDWLPKLTYL RTLSLFSYRN ITELPDSISN LVLLQYLDLS
0601: YTSIKSLPDA AFRLYNLQTL KLSNCESLTE LPEQIGDLLL LRYLDFSYTS INRLPEQIGN LVNLRHLDIR GTNLWEMPSQ ISKLQDLRVL TSFVVGRENG
0701: VTIRELRKFP YLQGTLSILR LQNVVDPKDA VQADLKKKEH IEELTLEWGS EPQDSQIEKD VLQNLQPSTN LKKLSIRYYS GTSFPKWLSY YSYSYVIVLC
0801: ITDCNYCFSL PPFGQLPSLK ELVIERMKMV KTVGEEFYCN NGGSLSFQPF PLLESIQFEE MSEWEEWLPF EGEGRKFPFP CLKRLSLSEC PKLRGNLPNH
0901: LPSLTEVSIS ECNQLEAKSH DLHWNTSIEK IKIREAGEGL LSLLGNFSYR NIRIENCDSL SSLPRIILAA NCLQSLTLFD IPNLISFSAD GLPTSLQSLH
1001: ISHCENLEFL SPESSHKYTS LESLVIGRSC HSLASLPLDG FSSLQFLRIE ECPNMEAITT HGGTNALQLT TLDVWNCKKL RSLPEQIDLP ALCRLYLNEL
1101: PELTSLPPRC LPSSLQTLEV DVGMLSSMSK HELGFLFQRL TSLFRLSITG FGEEDVVNTL LKECLLPTSL QYLSLRNLYD LKLLEGKGLQ HLTSLTELAI
1201: WNCKSLESLL EDQLPSSLEL LEISSCPLLE ARYQSRKGKH WSKIAHIPAI KINGEVII
Best Arabidopsis Sequence Match ( AT3G14470.2 )
(BLAST)
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.