Factsheet for PGSC0003DMT400018940

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 2
extracellular 4
cytosol 1
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024448	Potato	cytosol	72.68	73.78
PGSC0003DMT400007707	Potato	cytosol, extracellular, nucleus	70.63	71.93
PGSC0003DMT400077717	Potato	cytosol	58.58	70.45
PGSC0003DMT400050640	Potato	cytosol	70.71	67.93
PGSC0003DMT400070503	Potato	plasma membrane	66.93	66.25
PGSC0003DMT400035672	Potato	extracellular, plasma membrane	50.71	47.77
VIT_12s0034g01660.t01	Wine grape	extracellular	28.27	38.94
VIT_13s0067g01100.t01	Wine grape	extracellular	28.5	38.59
VIT_12s0034g01070.t01	Wine grape	cytosol	27.32	38.22
KRH65557	Soybean	cytosol	22.68	37.02
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	33.62	36.91
VIT_12s0121g00060.t01	Wine grape	cytosol	33.86	36.85
KRH28145	Soybean	cytosol	24.02	36.61
KRG89840	Soybean	cytosol, endoplasmic reticulum	17.72	36.0
KRH20599	Soybean	extracellular, plasma membrane	33.46	35.99
KRH65539	Soybean	cytosol	33.86	35.8
AT3G14470.1	Thale cress	endoplasmic reticulum	29.68	35.77
Bra027332.1-P	Field mustard	extracellular	29.29	35.7
KRH20671	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.31	35.61
VIT_12s0121g00050.t01	Wine grape	cytosol	36.06	35.59
KRG89841	Soybean	cytosol	34.57	35.43
KRG89748	Soybean	nucleus	35.04	35.37
KRH13312	Soybean	cytosol	13.78	35.35
KRH65544	Soybean	cytosol	33.39	35.3
KRH65458	Soybean	extracellular, plasma membrane	34.02	35.27
KRH20688	Soybean	plasma membrane	33.94	35.24
KRH18623	Soybean	cytosol	27.4	35.22
VIT_12s0034g02500.t01	Wine grape	extracellular	38.03	35.15
KRH65453	Soybean	extracellular, plasma membrane	34.49	35.15
KRH65416	Soybean	extracellular, plasma membrane	33.78	35.11
KRH65483	Soybean	extracellular, plasma membrane	34.49	35.1
KRH13356	Soybean	extracellular	20.94	35.09
KRH20659	Soybean	extracellular, plasma membrane	34.02	35.06
KRH13317	Soybean	extracellular	33.23	34.96
KRH65421	Soybean	extracellular, vacuole	33.46	34.92
KRH65454	Soybean	extracellular, plasma membrane	34.33	34.91
KRH65561	Soybean	extracellular, plasma membrane	34.17	34.89
KRH65423	Soybean	extracellular, plasma membrane	34.25	34.88
KRH13321	Soybean	cytosol	32.2	34.81
KRG89749	Soybean	cytosol	34.41	34.74
KRH13352	Soybean	extracellular	31.65	34.72
KRH18620	Soybean	cytosol	33.78	34.71
KRH65481	Soybean	extracellular, plasma membrane	32.68	34.67
KRH20675	Soybean	cytosol	23.86	34.67
KRH13325	Soybean	cytosol	25.35	34.66
KRH65532	Soybean	cytosol	23.7	34.64
KRH13358	Soybean	extracellular	32.83	34.63
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	36.93	34.51
KRH65531	Soybean	cytosol	9.69	34.45
KRH65543	Soybean	nucleus	31.81	34.44
KRH65538	Soybean	cytosol	33.54	34.41
KRH65580	Soybean	plasma membrane	32.99	34.37
VIT_13s0106g00020.t01	Wine grape	cytosol	34.33	34.06
CDX98463	Canola	endoplasmic reticulum	23.94	33.97
KRH65572	Soybean	nucleus	28.5	33.93
KRH13258	Soybean	extracellular	32.91	33.9
KRH65534	Soybean	cytosol	31.89	33.81
KRH65418	Soybean	extracellular, plasma membrane	28.58	33.74
KRH20627	Soybean	extracellular, plasma membrane	31.89	33.72
KRH13327	Soybean	extracellular	29.37	33.57
KRH65486	Soybean	cytosol	26.22	33.57
KRH55423	Soybean	plasma membrane	31.81	33.55
KRH65991	Soybean	plasma membrane	32.68	33.44
PGSC0003DMT400012949	Potato	extracellular	36.14	33.07
KRH45935	Soybean	endoplasmic reticulum, extracellular	16.77	33.02
KRH20538	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.83	33.02
KRH56350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.4	32.77
KRH76052	Soybean	endoplasmic reticulum	31.42	32.7
KRH65554	Soybean	cytosol	17.72	32.23
CDX97580	Canola	extracellular, plasma membrane	25.2	31.87
KRH20633	Soybean	extracellular	31.89	31.64
KRH13323	Soybean	cytosol	24.49	31.07
VIT_13s0067g02430.t01	Wine grape	extracellular	34.96	30.39
GSMUA_Achr9P11390_001	Banana	extracellular	23.07	30.33
VIT_13s0067g02580.t01	Wine grape	extracellular	34.49	29.78
KXG34889	Sorghum	cytosol	22.68	29.63
Zm00001d019356_P001	Maize	cytosol	22.2	29.41
GSMUA_Achr6P32070_001	Banana	cytosol	25.2	29.14
KRH13355	Soybean	plastid	32.13	29.08
GSMUA_Achr10P...	Banana	cytosol, golgi	16.85	28.69
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	27.72	28.62
GSMUA_Achr10P...	Banana	nucleus	25.28	28.28
Os04t0512900-01	Rice	nucleus	16.69	28.23
Os07t0273900-01	Rice	cytosol	15.91	27.98
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	21.34	27.79
Os01t0308300-00	Rice	plastid	23.62	27.78
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	16.77	27.24
OQU91449	Sorghum	mitochondrion	16.61	27.19
OQU91451	Sorghum	cytosol, mitochondrion	23.23	26.87
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	21.73	26.82
EES11060	Sorghum	nucleus	20.08	26.53
Os07t0273600-01	Rice	mitochondrion	8.66	25.23
Os03t0579200-00	Rice	cytosol	22.76	23.19
Os03t0579900-01	Rice	cytosol	4.09	22.41
KRH20628	Soybean	extracellular	32.91	19.01

Protein Annotations

EntrezGene:102599115	Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:ABB00505	ProteinID:ABB00505.1
ProteinID:ABB00509	ProteinID:ABB00509.1	ncoils:Coil	EMBL:DQ206128	EMBL:DQ206134	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0043531
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1ABE4	InterPro:NB-ARC	InterPro:P-loop_NTPase
PFAM:PF00931	EnsemblPlantsGene:PGSC0003DMG400007344	PGSC:PGSC0003DMG400007344	EnsemblPlants:PGSC0003DMT400018940	PRINTS:PR00364	PANTHER:PTHR23155
PANTHER:PTHR23155:SF414	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295EFA6	RefSeq:XP_006361751.1
SEG:seg	:	:	:	:	:

Description

Disease resistance protein R3a [Source:PGSC_GENE;Acc:PGSC0003DMG400007344]

Coordinates

chr11:+:38087018..38091006

Molecular Weight (calculated)

144167.0 Da

IEP (calculated)

5.532

GRAVY (calculated)

-0.165

Length

1270 amino acids

Sequence
(BLAST)

0001: MDIGLAVGGA FLSSALNVLF DRLTPQGDLL NMFQKHTNDV RLLKKLRMTL LGLQTVLSDA ENKQASNQFV SQWLNELRDA VDSAENLMEQ VNYEVLRLQV
0101: SSNQQVSDLN LCLSDDFFLN IKEKLEDTIE TLKDLQEQIG LLGLKEHFGS TKRETRTPST SLVDDSDIFG RQNDIENLID HLLSEDVNGN FLTVVPIVGM
0201: GGVGKTTLAK AVYNDEKVKN HFGLKAWFCV SEAYDAFRIT KGLLQEIGSF DLKVGDNLNQ LQAKLKESLK GKKFLVVLDD VWNDNYNEWD DLRNLFVQGD
0301: MGSKIIVTTR KENVASMMGS RAINVGTLSS EVSWDLFKRH SLENRDPEEH PKFEEVGRKI ADKCKGVPLA LKTLAGILRC KSEVEEWRDI LSRKIWDQPS
0401: CLNGILPALM LSYNDLPPDL KRCFAYCAIY PKDYLFCKDQ VIYLWIANGL VQQFHSGNQY FCELRSRSLF ERVPESEGKP EGFLMHDLVN DLARIASSKL
0501: CIRLEENKGS HMLEQSRHMS YSMGEGDDFE QLKPLYKLQQ LRTLLLIDTD YSPPLTKRVL HNILPRLTSL RSLSLSNSWI VELPDVLFIK LKLLRFLDLS
0601: RVLIEKLPDS ICVLYNLETL LLSHCSNLKE LPLQMEKLIN LRHLDVSNTF SLKMLLHLSK LKSLQVLVGA KLLLGGHGGL RMEDLGELHN LYGSLSILEL
0701: QNVVDRREAL KANFWEKNHV DKLSLEWSES TADNSQTERD ILDELCPHTN IKELQITGYR GTKFPNWPPS LSFLELVKLS IDSLPALGQL PSLKFLFIRR
0801: MHRITEVTEE FYGSSSSGKH FNSLEKLEFE DMPEWKQWHV LGSGEFPILE NLSIENCPKL IGKLPENLCS LTELSISRCP ELNLETPLFN EAELFTSQLK
0901: GMKHIVDLYI VGCNSLTSLP FSILPSTLKT ITISRCQKLK LDPPVGEISY CNMFLERLKL HECVSIDDIS PELVPRACKL NISSCHNITS FSIPTVTERL
1001: FIFGCHNLSV ACGGSQMTYL GIVYCEKLKW LPERMQELLP SLKELELLDC PEIESFPEGG MPFNLQQLRI GNCKKLVNSR KEWSLHRLPC LRKLVIEHDG
1101: SDEEIEHWEL PCSIQRFEVS NLKTLSTQLL KSLTSLEDLR IGNLPQIQSM LEEGLPSSLS HLTSLQSLSI FSCHQLQSLS LPSSLSKLNI ENCPNLQSLS
1201: ESALPSSLYE LTIAHCANLQ SLPAKGMLSS LSKLDISNCP FLKPLLEFDK GEYWPEIAHI SIIEIDEEYL

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.