Factsheet for Solyc11g071420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
extracellular 2
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
PProwler:	mitochondrion
PTS1:	peroxisome
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007707	Potato	cytosol, extracellular, nucleus	77.67	75.3
Solyc08g007630.1.1	Tomato	plasma membrane	60.38	73.89
Solyc11g069620.1.1	Tomato	extracellular	66.58	64.35
Solyc03g078300.1.1	Tomato	extracellular, nucleus, plasma membrane	50.29	45.34
VIT_12s0034g01660.t01	Wine grape	extracellular	30.27	39.7
VIT_13s0067g01100.t01	Wine grape	extracellular	29.53	38.06
KRH65557	Soybean	cytosol	23.66	36.76
AT3G14470.1	Thale cress	endoplasmic reticulum	31.6	36.24
Bra027332.1-P	Field mustard	extracellular	31.18	36.18
VIT_13s0064g01850.t01	Wine grape	cytosol, extracellular, nucleus, plastid	33.99	35.52
VIT_12s0034g01070.t01	Wine grape	cytosol	26.55	35.35
VIT_12s0121g00050.t01	Wine grape	cytosol	37.47	35.2
VIT_12s0121g00060.t01	Wine grape	cytosol	33.91	35.13
CDX98463	Canola	endoplasmic reticulum	25.97	35.08
KRH65531	Soybean	cytosol	10.34	35.01
KRH13356	Soybean	extracellular	21.84	34.83
KRG89840	Soybean	cytosol, endoplasmic reticulum	17.95	34.72
KRH65539	Soybean	cytosol	34.08	34.3
KRH20599	Soybean	extracellular, plasma membrane	33.5	34.29
KRH28145	Soybean	cytosol	23.57	34.21
KRH65458	Soybean	extracellular, plasma membrane	34.49	34.04
VIT_12s0034g02310.t01	Wine grape	extracellular, plasma membrane	38.21	34.0
KRH65416	Soybean	extracellular, plasma membrane	34.33	33.96
KRH13312	Soybean	cytosol	13.9	33.94
VIT_12s0034g02500.t01	Wine grape	extracellular	38.46	33.84
KRH20688	Soybean	plasma membrane	34.16	33.77
KRH13352	Soybean	extracellular	32.34	33.77
KRH20671	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.17	33.75
KRH65453	Soybean	extracellular, plasma membrane	34.74	33.71
KRH65454	Soybean	extracellular, plasma membrane	34.82	33.71
KRH65421	Soybean	extracellular, vacuole	33.91	33.69
KRH65481	Soybean	extracellular, plasma membrane	33.33	33.67
KRH65544	Soybean	cytosol	33.42	33.64
KRH65423	Soybean	extracellular, plasma membrane	34.66	33.6
KRH65483	Soybean	extracellular, plasma membrane	34.66	33.57
KRH13321	Soybean	cytosol	32.59	33.53
KRH13358	Soybean	extracellular	33.33	33.47
KRH13317	Soybean	extracellular	33.42	33.47
KRH20659	Soybean	extracellular, plasma membrane	33.91	33.28
KRH45935	Soybean	endoplasmic reticulum, extracellular	17.7	33.18
KRH65418	Soybean	extracellular, plasma membrane	29.45	33.09
KRH18620	Soybean	cytosol	33.66	32.93
VIT_13s0106g00020.t01	Wine grape	cytosol	34.82	32.89
KRG89841	Soybean	cytosol	33.66	32.85
KRH65580	Soybean	plasma membrane	33.0	32.73
KRH13325	Soybean	cytosol	25.14	32.72
KRH65561	Soybean	extracellular, plasma membrane	33.66	32.72
KRH65538	Soybean	cytosol	33.5	32.71
KRH18623	Soybean	cytosol	26.72	32.69
KRG89748	Soybean	nucleus	33.91	32.59
CDX97580	Canola	extracellular, plasma membrane	27.05	32.57
KRH55423	Soybean	plasma membrane	32.42	32.56
KRH65543	Soybean	nucleus	31.51	32.48
KRH65534	Soybean	cytosol	32.18	32.47
KRH65572	Soybean	nucleus	28.62	32.43
KRH20627	Soybean	extracellular, plasma membrane	32.18	32.39
KRH13258	Soybean	extracellular	33.0	32.36
KRH65991	Soybean	plasma membrane	33.17	32.31
KRG89749	Soybean	cytosol	33.58	32.27
KRH13327	Soybean	extracellular	29.45	32.04
KRH65486	Soybean	cytosol	26.14	31.85
KRH20675	Soybean	cytosol	22.99	31.81
KRH65532	Soybean	cytosol	22.58	31.42
KRH20633	Soybean	extracellular	33.25	31.41
KRH76052	Soybean	endoplasmic reticulum	31.68	31.39
KRH56350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.3	31.07
KRH20538	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.42	31.04
KRH13323	Soybean	cytosol	25.39	30.67
KRH65554	Soybean	cytosol	17.62	30.52
GSMUA_Achr9P11390_001	Banana	extracellular	24.23	30.33
VIT_13s0067g02430.t01	Wine grape	extracellular	35.73	29.57
VIT_13s0067g02580.t01	Wine grape	extracellular	35.24	28.96
Os04t0512900-01	Rice	nucleus	17.87	28.76
Os07t0273900-01	Rice	cytosol	17.12	28.67
Solyc02g084450.2.1	Tomato	cytosol, endoplasmic reticulum	20.93	28.56
GSMUA_Achr6P32070_001	Banana	cytosol	25.72	28.32
KRH13355	Soybean	plastid	32.84	28.3
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	28.78	28.29
GSMUA_Achr10P...	Banana	cytosol, golgi	17.45	28.28
GSMUA_Achr10P...	Banana	nucleus	26.55	28.28
KXG34889	Sorghum	cytosol	22.58	28.09
Zm00001d019356_P001	Maize	cytosol	22.08	27.84
Os01t0308300-00	Rice	plastid	24.81	27.78
Os07t0273600-01	Rice	mitochondrion	9.93	27.52
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	22.17	27.49
OQU91451	Sorghum	cytosol, mitochondrion	24.65	27.14
OQU91449	Sorghum	mitochondrion	17.29	26.93
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.04	26.34
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	22.33	26.24
EES11060	Sorghum	nucleus	20.35	25.6
Os03t0579200-00	Rice	cytosol	23.57	22.87
Os03t0579900-01	Rice	cytosol	3.97	20.69
KRH20628	Soybean	extracellular	33.5	18.42

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531
InterPro:IPR032675	UniProt:K4DAJ9	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR23155	PANTHER:PTHR23155:SF414	SUPFAM:SSF52058	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc11g071420.1
EnsemblPlants:Solyc11g071420.1.1	UniParc:UPI00027696BC	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:+:54902118..54905747

Molecular Weight (calculated)

137934.0 Da

IEP (calculated)

6.041

GRAVY (calculated)

-0.206

Length

1209 amino acids

Sequence
(BLAST)

0001: MEVGLAVGGA FLSSGLQVIF DRLAPKGDLL KMFQKHKKDV RLLKKLRMTL LGLQAVLSDA ENKQASNQFV REWLNELRDA VDGAENLIEQ VNYEALRLEA
0101: EGKHQNLGET SNQQVSELNL CLSDDFFLNI KNKLEYTIET LKDLQEQIGD LGLKEHFGST KQETRTPSTS LVDDSDIFGR QNDIEELIDR LLSEDASGKK
0201: LTVVPIVGMG GVGKTTLAKV VYNDEKVKDY FDLRAWFCVS EAYDAFRITK GLLQEIDSYD LKADENLNQL QVKLKESLKG KKFLVVLDDV WNDNYTEWDE
0301: LRNVFVQGDI GSKIIVTTRK ESVALMMGCG AINVGTLSDE ASWDLLKRHS LEYKDPKEHP EFEEIGKQIA CKCKGLPLAL KALAGALRCK SEVDEWRDIL
0401: RSEIWELPSC LNGILPALML SYNDLPAPLK QCFAYCAIYP KDYQFCKDQI IHLWIANGLV QQLLSGNQYF LELRSRSLFE RVPESSEWNS EKFLMHDLVN
0501: DLSQIASSNL CIRLEEKKGL HMLEQCRHMS CLIGEDGDFE KLKSLFKSEQ LRTLLPINIQ PYYNNNNLSK RVQLNILPRL RSLRVLSLSH YSIKELSNDL
0601: FIKLKLLRFL DISHTKFKRL PDSICVLYNL ETLLLSSCAD IEELPLQMEK LINLHYLDIS NTPRLKMPLH LSKLKSLQVL VGAKFLLGGS RMEDLGEVHN
0701: LYGSLSVLEL QHVVDIREVL KAKMREKNHV DKLSLEWSGS SSADNAQTER DILEELRPHK NIKEVEIIGY RGTNFPDWVA DPLFVKLVKL SLRNCKNCYS
0801: LPALGQLPCL KFLWIRGMHG ITEVTEEFYG SLSPFNSLVE LRFEDMPEWK QWHLPGRGEF PTLEKLLVKN CPELSLETPI QLSSLKRFNV IGCPKVGVVF
0901: DEGMKQIEEF YIRDCNSLPF SILPSSLKVV ECDCIDDISA ELLPTARNLS IRNCHNLTRL SIPTATESLY IQKCEKLSMA CGGTQMTYLC IRDCKKLNWL
1001: PELLPSLKTL ELINCPEIES FPRGRLQQLV IWNCKKLVNR RKEWRLQTLP CLRELLISHD GSDEDIEHWE LPCSITRLEV SNLKTLSSQH LKSLTSLQYL
1101: CIEGNLPQIQ SMLEQGHFSH LTSLQTLLIM NFRNLQSLPQ SALPSSLSQL TIYDCSNLQS LPLKGMPSSL SKLSISKCPL LTPLLEFEKG EYWTEIAQIP
1201: SIYIDGECL

Best Arabidopsis Sequence Match ( AT3G14470.2 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.