Factsheet for Os05t0492200-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G068200.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.29	77.88
TraesCS1A01G309500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.29	77.88
TraesCS1B01G320500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.11	77.7
Os05t0492600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.06	77.07
KXG22249	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.44	76.47
HORVU0Hr1G031070.1	Barley	cytosol, plastid	31.05	76.03
TraesCS1D01G309000.1	Wheat	cytosol	78.56	75.86
Zm00001d038548_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.33	75.07
HORVU0Hr1G031060.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.03	73.5
HORVU0Hr1G032250.1	Barley	cytosol	78.38	72.87
GSMUA_Achr10P...	Banana	extracellular	50.18	55.95
GSMUA_Achr7P21400_001	Banana	extracellular	53.11	55.02
Os05t0414200-01	Rice	cytosol	12.54	32.94
Os07t0273900-01	Rice	cytosol	20.55	31.99
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	32.65	31.8
Os04t0512900-01	Rice	nucleus	21.17	31.69
VIT_15s0024g00440.t01	Wine grape	cytosol	25.62	30.93
Os03t0324600-01	Rice	cytosol	28.83	30.2
Os04t0111900-02	Rice	cytosol, mitochondrion	29.45	30.12
Os05t0414300-02	Rice	cytosol	17.17	29.83
Os03t0566700-01	Rice	cytosol, extracellular	5.07	29.38
Os09t0314200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, plastid, vacuole	26.69	29.15
Os01t0308300-00	Rice	plastid	26.33	27.41
Os06t0619000-01	Rice	cytosol	28.11	26.99
VIT_15s0024g00450.t01	Wine grape	cytosol	18.33	26.96
Os07t0273600-01	Rice	mitochondrion	10.23	26.38
Os06t0667900-00	Rice	plasma membrane	24.91	23.81
Os03t0579200-00	Rice	cytosol	25.71	23.19
Os01t0178900-01	Rice	cytosol	9.79	20.91
Os04t0112100-01	Rice	cytosol, plastid	5.07	16.81
Os03t0579900-01	Rice	cytosol	2.58	12.5

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:4339179	EMBL:AK243033	UniProt:B7F9W6
ProteinID:BAS94671.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlantsGene:Os05g0492200	EnsemblPlants:Os05t0492200-01	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR23155	PANTHER:PTHR23155:SF520	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000188B006
RefSeq:XP_015640706.1	SEG:seg	:	:	:	:

Description

YR1, YR7, YR11, YR20, YR22, YR24NB-ARC domain containing protein. (Os05t0492200-01)

Coordinates

chr5:+:24184504..24189203

Molecular Weight (calculated)

127371.0 Da

IEP (calculated)

5.903

GRAVY (calculated)

-0.132

Length

1124 amino acids

Sequence
(BLAST)

0001: MVIGEAVLSA FMQALFDKVI AAAIGELKFP QDIAEELQKL SSSLSTIQAH VEDAEARQLK DRAARSWLAK LKDVAYEMDD LLDEYAAETL QSELEGSSRS
0101: RHLSKVRSSF CCLWLNNCFS NHKIVQQIRK IEEKIDRLVK ERQLIGPDMS STMDREEIKE RPKTSSLIDG SSVFGREEDK ENIVKMLLTP NNSNHANVSV
0201: LPIVGMGGLG KTTLTQLVYN DPRVKEYFQL RVWLCVSENF DEMKLTKETI ESVASGFSSV TTNMNLLQED LSKKLEGKRF LLVLDDVWNE DPEKWDRYRC
0301: ALVSGSNGSR IVVTTRNKNV GKLMGGMTPY FLKQLSENDC WNLFRSYAFA DGDSSLHPHL EIIGKEIVKK LKGLPLAAKA IGSLLCTKDT EDDWKNVLRS
0401: EIWELPSDKN NILPALRLSY NHLPAILKRC FAFCSVFHKD YVFEKETLVQ IWMALGFIQS PGRRTIEELG SSYFDELLSR SFFQHHKGGY VMHDAMHDLA
0501: QSVSMDECLR LDDPPNSSST SRSSRHLSFS CHNRSRTSFE DFLGFKRART LLLLNGYKSR TSPIPSDLFL MLRYLHVLEL NRRDITELPD SIGNLKMLRY
0601: LNLSGTGITV LPSSIGRLFN LQTLKLKNCH VLECIPESIT NLVNLRWLEA RIDLITGIAR IGNLTCLQQL EEFVVHNDKG YKISELKTMM SIGGRICIKN
0701: LEAVDSAEEA GEALLSKKTR IRILDLVWSD RRHLTSEEAN QEKEILEQLQ PHCELRELTV KGFVGFYFPK WLSRLCHLQT IHLSDCTNCS ILPALGELPL
0801: LKFLDIGGFP AIIQINQEFS GSDEVKGFPS LKELVIEDMV NLQRWVSFQD GELLPSLTEL EVIDCPQVTE FPPLPPTLVK LIISETGFTI LPEVHVPNCQ
0901: FSSSLACLQI HQCPNLISLQ NGLLSQKLFS LQQLTITKCA ELTHLPAEGF RSLTALKSLH IYDCEMLAPS EQHSLLPPML EDLRITSCSN LINPLLQELN
1001: ELSSLIHLTI TNCANFYSFP VKLPVTLQTL EIFQCSDMSY LPADLNEVSC LTVMTILKCP LITCLSEHGL PESLKELYIK ECPLITERCQ EIGGEDWPKI
1101: AHVPVIEIDD DYFIPNRSIR RRLS

Best Arabidopsis Sequence Match ( AT3G14470.2 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.