Factsheet for GSMUA_Achr7P21400_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	58.71	63.19
Os05t0492600-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.07	55.41
HORVU0Hr1G031060.1	Barley	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.1	53.36
Os05t0492200-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.02	53.11
TraesCS1B01G320500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.29	52.12
HORVU1Hr1G068200.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.82	51.68
TraesCS1A01G309500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.73	51.59
KXG22249	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.72	51.58
TraesCS1D01G309000.1	Wheat	cytosol	54.01	50.34
Zm00001d038548_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.0	50.31
HORVU0Hr1G032250.1	Barley	cytosol	53.73	48.22
HORVU0Hr1G031070.1	Barley	cytosol, plastid	19.91	47.06
GSMUA_AchrUn_...	Banana	cytosol	17.51	42.32
GSMUA_AchrUn_...	Banana	cytosol	16.87	39.35
GSMUA_AchrUn_...	Banana	cytosol	13.46	38.83
GSMUA_Achr4P31030_001	Banana	cytosol	37.42	37.21
GSMUA_Achr3P22320_001	Banana	cytosol	29.49	35.79
GSMUA_Achr3P22260_001	Banana	cytosol	30.78	35.46
GSMUA_AchrUn_...	Banana	plastid	13.92	35.36
GSMUA_Achr3P22280_001	Banana	cytosol	30.97	35.22
GSMUA_Achr3P22250_001	Banana	cytosol	30.69	34.58
GSMUA_Achr9P11390_001	Banana	extracellular	30.23	33.95
GSMUA_Achr6P32070_001	Banana	cytosol	34.19	33.79
GSMUA_Achr6P08580_001	Banana	cytosol	27.83	33.3
GSMUA_Achr6P21800_001	Banana	cytosol, extracellular, nucleus	37.42	33.2
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	34.47	32.41
GSMUA_Achr9P17060_001	Banana	endoplasmic reticulum, vacuole	32.17	32.11
GSMUA_Achr10P...	Banana	cytosol, golgi	21.57	31.37
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	28.11	31.28
VIT_15s0024g00440.t01	Wine grape	cytosol	26.82	31.26
GSMUA_Achr3P22310_001	Banana	cytosol	32.07	31.21
GSMUA_Achr3P09290_001	Banana	plastid	35.39	31.17
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	34.47	30.41
GSMUA_Achr6P34690_001	Banana	extracellular	38.71	30.22
GSMUA_Achr10P...	Banana	nucleus	31.24	29.87
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	21.47	29.8
GSMUA_Achr3P22290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	30.23	28.45
VIT_15s0024g00450.t01	Wine grape	cytosol	19.08	27.09

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr7G21400_001	EnsemblPlants:GSMUA_Achr7P21400_001	EnsemblPlants:GSMUA_Achr7T21400_001	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M0TJH7	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR23155	PANTHER:PTHR23155:SF520	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI0002952907
SEG:seg	:	:	:	:	:

Description

disease resistance protein RGA2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G21400_001]

Coordinates

chr7:+:24189047..24198745

Molecular Weight (calculated)

123462.0 Da

IEP (calculated)

6.171

GRAVY (calculated)

-0.187

Length

1085 amino acids

Sequence
(BLAST)

0001: MAGQAVLSAF MQVLFEKVIT AAVDEFRLLR GVRGELQNLA TTLSTIQALL EDAEEKQLQD KSVRHWLAKL KDVAYDMDEL LDECAAAKIR WEMESRARRC
0101: SWKMQVSGCF SDSCWHRSSY HYNLAHRTKA VQERFDRIAT ERHNLGLQVS GGISQLQITE RPQTSSLEDD LKVLGREEDR EALISMLLSA NNSSHTVTVL
0201: PIIGMGGLGK TTLAKSVYND HRIKQHFQLR MWVCVSENFD ETKLTKETLE SATREFYATT TNMTLIQEDL FEQLQGKRFL LVLDDVWNED PIKWYRYRNA
0301: IIGGERGSKI LVTTRNENVG RIMGGWPSYR LKQLSDDDCW ELFRNYAFVG GNSSTHPNLE KIGKMIVKNL KGLPLAAMAI GSLLFSKLEE EEWKSILRSE
0401: IWELPADKNN ILPALRLSYK QLPSHLKQCF VFCSVFHKDF VFDKDRLVKT WMALGFIQPM GGKRMEDIGS SYFDELVSRS FFQSHKGYYV MHDAIHDLAQ
0501: SLSVEECHRL ECGLRNVGLE KKIRHLSFST GGIPDELFLR LKCLRVLKLR RRDIEELPKS IGSLIQLRYL DLANTGIRTL PQSISKLYNL QTLILRNCNF
0601: LTEIPRGITN LIHLRHLEAT STLISGIAGL GCLTCLQELE RFIVRKDDGF KITELQDMNE LRGHLCIQNL ESVVDRKEAG EANLHAKEHL SFLSLEWTKD
0701: RDLVLEDEIL CEEEVLEDLQ PHHELRELKV MGYAGTKLPS WIGNPSFCYL ETIHLSNLMR CKHLPPLGQL PLLRYLDIGG VPGLVRIGQE FHGRGDIKGF
0801: PSLIELVLED MPALEEWVCS DDDELLPCLT DLGIEDCSNL RELPCLPPTI ERLRISGVGI TTLPDLRGSN CQFSSLNVYD CPNLTSLQKG LLGQQLKAIE
0901: QLAIVDCEEL ILLPQEGFKD LVSLKSLSIY NCPKLVPLED DKRLLPRSLT ELRISSCSKL INRLLADCKD LASLKHLRVT DCADLYRFPE EGLPTALESL
1001: GVFRCYNLLL LPAKLQELHS LKSMVIDNCH QVQCSPEEGL PMELKDLLVC GCPLLQEYCL GDGAAGRHQL MHIPRVQFDD VLLRN

Best Arabidopsis Sequence Match ( AT3G14470.2 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.