Factsheet for GSMUA_AchrUn_randomP28720_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
plasma membrane 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	47.07	38.06
GSMUA_AchrUn_...	Banana	cytosol	43.35	36.3
GSMUA_Achr3P22260_001	Banana	cytosol	72.87	29.09
GSMUA_Achr3P22280_001	Banana	cytosol	70.48	27.78
GSMUA_Achr3P22250_001	Banana	cytosol	68.88	26.9
GSMUA_Achr3P22320_001	Banana	cytosol	62.77	26.4
GSMUA_AchrUn_...	Banana	plastid	29.26	25.76
GSMUA_Achr3P22310_001	Banana	cytosol	74.73	25.2
GSMUA_Achr3P22290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	72.07	23.5
GSMUA_Achr6P21800_001	Banana	cytosol, extracellular, nucleus	52.13	16.03
GSMUA_Achr6P34690_001	Banana	extracellular	56.91	15.4
GSMUA_Achr10P...	Banana	cytosol, golgi	29.79	15.01
VIT_15s0024g00450.t01	Wine grape	cytosol	29.26	14.4
GSMUA_Achr10P...	Banana	extracellular	38.03	14.19
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	29.26	14.07
GSMUA_Achr7P21400_001	Banana	extracellular	38.83	13.46
GSMUA_Achr4P31030_001	Banana	cytosol	38.83	13.38
TraesCS2A01G362300.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	32.45	13.33
VIT_15s0024g00440.t01	Wine grape	cytosol	31.65	12.78
GSMUA_Achr9P17060_001	Banana	endoplasmic reticulum, vacuole	35.11	12.14
TraesCS2D01G359800.1	Wheat	cytosol, extracellular, nucleus, plastid	34.04	11.7
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	30.32	11.69
GSMUA_Achr6P08580_001	Banana	cytosol	28.19	11.69
TraesCS2B01G380100.1	Wheat	cytosol, extracellular, nucleus, plastid	32.71	11.29
GSMUA_Achr9P11390_001	Banana	extracellular	28.99	11.28
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	34.04	11.09
HORVU2Hr1G087730.13	Barley	cytosol	33.24	10.96
GSMUA_Achr6P32070_001	Banana	cytosol	31.65	10.84
GSMUA_Achr3P09290_001	Banana	plastid	34.31	10.47
GSMUA_Achr10P...	Banana	nucleus	31.38	10.4
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	33.24	10.16

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP28720_001	EnsemblPlants:GSMUA_AchrUn_randomT28720_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG28720_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR23155
PANTHER:PTHR23155:SF873	PFAM:PF13855	SEG:seg	SUPFAM:SSF52058	UniParc:UPI00029508B8	UniProt:M0UD80
MapMan:35.1	:	:	:	:	:

Description

Putative disease resistance RPP13-like protein 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28720_001]

Coordinates

chrchrUn_random:-:139341427..139343380

Molecular Weight (calculated)

43384.4 Da

IEP (calculated)

6.020

GRAVY (calculated)

-0.267

Length

376 amino acids

Sequence
(BLAST)

001: KNILQVLQQS YHHHLPPHLK RCFVFCSLFP KDHRSFFQEA LLGSKYVMHD LIHDLAQFIS EGEFYKIEDD ELKNIRVLIL KSCGLRELPE TIGDLIHLRY
101: LDISYNRQIW RLSESLCGLY NLRVLDLSEC ELQSGLKQLH GQLRITNIEN VESKQEASKA NLNNKQYLDA LALQWTSDDG SSLDGNELVM SEEVLEGLQP
201: HQALKRLTIR GYNGVRSPSW LQAQLLSNLI TLELENCTAW EDLSCIGQLP NLKNLYVKGM PAVKQISHGL STESKFLPNL EELVLENMIG HEFFNHIDKN
301: WLPKLEKIHL EDIPACERLP SWQEWSWADG GELFPCLRRL EIVRCPKLQR LPPLPPLETL RLDEVGLTGA TLFCFR

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.