Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- extracellular 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 20.03 | 54.57 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 61.32 | 53.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.2 | 53.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.03 | 52.13 |
| GSMUA_Achr3P22320_001 | Banana | cytosol | 35.57 | 48.66 |
| GSMUA_Achr3P22260_001 | Banana | cytosol | 36.71 | 47.66 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 36.63 | 46.96 |
| GSMUA_Achr3P22250_001 | Banana | cytosol | 36.79 | 46.73 |
| GSMUA_AchrUn_... | Banana | plastid | 16.11 | 46.14 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 41.78 | 45.83 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 37.86 | 40.16 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 28.21 | 37.7 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 33.2 | 37.42 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 33.03 | 37.1 |
| GSMUA_Achr10P... | Banana | extracellular | 30.5 | 37.0 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 32.87 | 36.85 |
| TraesCS2D01G359800.1 | Wheat | cytosol, extracellular, nucleus, plastid | 32.71 | 36.56 |
| HORVU2Hr1G087730.13 | Barley | cytosol | 33.2 | 35.61 |
| GSMUA_Achr6P08580_001 | Banana | cytosol | 22.73 | 30.65 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 30.83 | 30.6 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 28.54 | 30.24 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 27.15 | 30.24 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 23.79 | 30.12 |
| GSMUA_Achr9P17060_001 | Banana | endoplasmic reticulum, vacuole | 25.84 | 29.07 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 21.91 | 28.79 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 16.76 | 27.48 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 21.18 | 26.56 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 26.57 | 26.42 |
| GSMUA_Achr10P... | Banana | nucleus | 24.04 | 25.9 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 16.43 | 25.7 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.86 | 25.39 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr6G21800_001 | EnsemblPlants:GSMUA_Achr6P21800_001 | EnsemblPlants:GSMUA_Achr6T21800_001 | InterPro:IPR032675 |
| InterPro:LRR_dom_sf | UniProt:M0T928 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI0002954961 | SEG:seg | : | : |
Description
Putative disease resistance protein RGA3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G21800_001]
Coordinates
chr6:+:18424267..18427938
Molecular Weight (calculated)
137987.0 Da
IEP (calculated)
5.342
GRAVY (calculated)
-0.189
Length
1223 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSTALTIGGW FAQGFIQALL DKASDSAVQQ LAKRGGLQDD LRKLQTILYT TSVMVDTADM RYEKNPNLRK LMKQLKDAAY DAEDLLDELE CQALKQKIQN
0101: GGEQASDLFS LAFNTSGYDA GTKLREIQGN LSEITANMKY TMELLNLHDP GRRSNMKLPC RETSSFLTET RVYGRDRELE KVVELLSTSV EKSEPDINNL
0201: CVLPLLGIGG IGKTTLAQFV YNDATVRKHF QLKIWVCVSD SFDVKRLTKE IIESVTNEKQ SDLMNLDTLQ VILKVKIASK RFLLVLDDVW SVDTHGLDEW
0301: QKLCAPLRFG AQGSMVMVTT RDLRIASIVG TMKEILLDGL EDDDYWELFK KCAFGSLNPE EHPELEAIGR KIAGKLKGSP LAAKTIGSLL RSNANKGYWR
0401: TTMESEVWEL PQDENGVLSV LRLSYRYLPG HLKQCFTFCS LFPKAHEFYQ DQLIQIWMAE GYITPEENKT VEDVGRSYVC ELVNRSFFQA SADGDYYVMH
0501: DLVHDLAQYI SVEECYRISD GKSKRIRSMI RHLSAELTDG TKLMEFSGYE KLRTLMINCN RSRFLCWPRV ESCLLPRDML KRLRSIHVLV LQNCGLPELP
0601: ETIGDLIHLR YLDVSYNAGI QRLPDALFGL YNLQALLLWD CQLQRLPKGM SNLINLRHLS ASYEIVSEIY EVGKLTSLQE LSAFRVLKDH GHRLAELKGL
0701: TQLHGTLRIT NLENVESREE AAKAKLSNKE YIDALELEWA SDDDGSSSDD NETPVEEGEI LEGLQPHHAL KCLRITGYHS ARSPGWLKAQ VLSNLESVIL
0801: ENCRTWEDLS CIGQLPNLKV LHIMGMPSVK KIGHELFGPQ GRCFLRLEEV VLRDMPALEE WSWIEGRMLF PSLRKLEVRK CPELLILPLL PPPLTELELR
0901: QVGLAQLSGS REGINGSGRT SVNPSDAEEE LLSYHLPHIN SIKISECGEL LWLPVKRLKD LTSLEDLSIL GCPKLMSTRR DEDIIDPLLP PSIKQLELTD
1001: CGNLGKSLPG CLHNLTSLTQ LLIRDCPCVV SLPVEALLRL EQLEILTVMH CIELISIEGL GVLKSLQGLR ISGCPKLLVN EAGDEQGEGL SLVDLEIDDT
1101: ALLKLSPLRN TLPSIRNLTI SSSPQAVMFD GEEQELLRSF TDLKLLEFFS CKNLRSLPTE LHALPSLQDL HVYYCPQIQS LPEMGLPTSL KNLQFDCCHP
1201: TLTEQLEKHL VKMKISGRFN GDY
0101: GGEQASDLFS LAFNTSGYDA GTKLREIQGN LSEITANMKY TMELLNLHDP GRRSNMKLPC RETSSFLTET RVYGRDRELE KVVELLSTSV EKSEPDINNL
0201: CVLPLLGIGG IGKTTLAQFV YNDATVRKHF QLKIWVCVSD SFDVKRLTKE IIESVTNEKQ SDLMNLDTLQ VILKVKIASK RFLLVLDDVW SVDTHGLDEW
0301: QKLCAPLRFG AQGSMVMVTT RDLRIASIVG TMKEILLDGL EDDDYWELFK KCAFGSLNPE EHPELEAIGR KIAGKLKGSP LAAKTIGSLL RSNANKGYWR
0401: TTMESEVWEL PQDENGVLSV LRLSYRYLPG HLKQCFTFCS LFPKAHEFYQ DQLIQIWMAE GYITPEENKT VEDVGRSYVC ELVNRSFFQA SADGDYYVMH
0501: DLVHDLAQYI SVEECYRISD GKSKRIRSMI RHLSAELTDG TKLMEFSGYE KLRTLMINCN RSRFLCWPRV ESCLLPRDML KRLRSIHVLV LQNCGLPELP
0601: ETIGDLIHLR YLDVSYNAGI QRLPDALFGL YNLQALLLWD CQLQRLPKGM SNLINLRHLS ASYEIVSEIY EVGKLTSLQE LSAFRVLKDH GHRLAELKGL
0701: TQLHGTLRIT NLENVESREE AAKAKLSNKE YIDALELEWA SDDDGSSSDD NETPVEEGEI LEGLQPHHAL KCLRITGYHS ARSPGWLKAQ VLSNLESVIL
0801: ENCRTWEDLS CIGQLPNLKV LHIMGMPSVK KIGHELFGPQ GRCFLRLEEV VLRDMPALEE WSWIEGRMLF PSLRKLEVRK CPELLILPLL PPPLTELELR
0901: QVGLAQLSGS REGINGSGRT SVNPSDAEEE LLSYHLPHIN SIKISECGEL LWLPVKRLKD LTSLEDLSIL GCPKLMSTRR DEDIIDPLLP PSIKQLELTD
1001: CGNLGKSLPG CLHNLTSLTQ LLIRDCPCVV SLPVEALLRL EQLEILTVMH CIELISIEGL GVLKSLQGLR ISGCPKLLVN EAGDEQGEGL SLVDLEIDDT
1101: ALLKLSPLRN TLPSIRNLTI SSSPQAVMFD GEEQELLRSF TDLKLLEFFS CKNLRSLPTE LHALPSLQDL HVYYCPQIQS LPEMGLPTSL KNLQFDCCHP
1201: TLTEQLEKHL VKMKISGRFN GDY
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.