Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plastid | 39.67 | 89.46 |
| GSMUA_Achr3P22320_001 | Banana | cytosol | 79.34 | 85.46 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.94 | 83.52 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 81.1 | 81.87 |
| GSMUA_Achr3P22260_001 | Banana | cytosol | 76.84 | 78.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.45 | 75.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.9 | 68.88 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 74.87 | 62.53 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 53.17 | 45.92 |
| GSMUA_Achr6P21800_001 | Banana | cytosol, extracellular, nucleus | 46.73 | 36.79 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 49.64 | 34.39 |
| GSMUA_Achr10P... | Banana | extracellular | 34.27 | 32.74 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 31.05 | 32.68 |
| GSMUA_Achr6P08580_001 | Banana | cytosol | 29.28 | 31.09 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 35.2 | 31.07 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 34.58 | 30.69 |
| TraesCS2D01G359800.1 | Wheat | cytosol, extracellular, nucleus, plastid | 33.44 | 29.43 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 33.02 | 29.2 |
| HORVU2Hr1G087730.13 | Barley | cytosol | 33.85 | 28.6 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 27.41 | 27.33 |
| GSMUA_Achr9P17060_001 | Banana | endoplasmic reticulum, vacuole | 30.53 | 27.05 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 26.48 | 26.15 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 20.15 | 26.01 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 30.95 | 25.82 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.28 | 25.68 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 32.19 | 25.16 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 20.35 | 25.06 |
| GSMUA_Achr10P... | Banana | nucleus | 28.76 | 24.41 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 30.11 | 23.58 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 22.43 | 23.2 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.58 | 19.63 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | EMBL:AM931387 | ProteinID:CAP66347 | ProteinID:CAP66347.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr3G22250_001 |
| EnsemblPlants:GSMUA_Achr3P22250_001 | EnsemblPlants:GSMUA_Achr3T22250_001 | InterPro:IPR032675 | InterPro:LRR_dom_sf | UniProt:M0SGU1 | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PANTHER:PTHR23155 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI00029542F7 | SEG:seg | : | : | : | : |
Description
Putative Disease resistance protein RGA2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22250_001]
Coordinates
chr3:-:23164050..23167079
Molecular Weight (calculated)
109700.0 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.289
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWILAGLG SLGQALIGRV KDQISDCLIG RVLEEPGVAD LDKLRNTLSG TERIIGRVEN MWIKDEDTKK RLKELLMKLK DTVYDADDLL DEIQFPVLKQ
101: QIEQQGAQGY EASNQSSSSS GLHPSKRRKL YERVGRFFGR EDDVIRVGKI QMKLDEYTTY IKDFITTTDA DEKQMITSVV PRTTTSFPIE TQVFGREKQL
201: NHLLEQLMIS ADGSGSSNSS ISTLTIVGIG GVGKTTLAQH AYHHERVKDY FHHKVWVCVS DNFNVERLTK EIIESLTQNT CDLNNFDTLQ VVVKEKLTSK
301: RFLLVLDDVW NEDSLKWERF CAPLRYGEPG SKILVTTRSK KIAEMVGNPI PLGGLDEASY WKLFKKCAFG SKDAGEFPQL EAIAKKIAGR LEGLPLAART
401: VGGLLKDPMN EKHWRNIAES EIWQLQQDEQ GVLPVLQLSY QCLPPHLKRC FVFCSLFPKD HRFEGEHLVR LWMAEGYVAQ DNNMTMEDTG SRYFLDLVNR
501: SFFQEAPWRS KYVMHDLIHD LAQFISDGEF CRIDDESKEI PNTTRHLSTK LTDGTKLMEL SCYDKLRTLW INSRSIWFDS PVESPLFIQF EKLKNIRVLL
601: LKNYGLRELP ETIGELIHLR YLDISYNRYI RWLPESLCDL YNLRVLDLQD CKLQSFPHGM SKLINLMHLN AADEIISKIN NIGKLTSLQG LSSFKVLKDQ
701: GHEVAQLGSL KQLHGRLRIT NLENVESKQE ANKANLNNKQ YLDELVLGWT SDDGASLDGN ELVVSEEVLE GLQPHQALQR LMIVGYIGVR SPSWLQAQLL
801: ANLRTLILIN CKAWKDLSYI GQLPNLKKLY VKRMPAVKQI MTKVGHGFFG CRDRGKCFPC LEVLNFSSMP AWAEWSWADG RELFPCLLKL QIVQCPRLKR
901: MPPLPPSLKS LSLCKVGLTE VPRLWAEIDG SSSSMTVSEL KLYSLEKVEL EDIPKCEGLP CLG
101: QIEQQGAQGY EASNQSSSSS GLHPSKRRKL YERVGRFFGR EDDVIRVGKI QMKLDEYTTY IKDFITTTDA DEKQMITSVV PRTTTSFPIE TQVFGREKQL
201: NHLLEQLMIS ADGSGSSNSS ISTLTIVGIG GVGKTTLAQH AYHHERVKDY FHHKVWVCVS DNFNVERLTK EIIESLTQNT CDLNNFDTLQ VVVKEKLTSK
301: RFLLVLDDVW NEDSLKWERF CAPLRYGEPG SKILVTTRSK KIAEMVGNPI PLGGLDEASY WKLFKKCAFG SKDAGEFPQL EAIAKKIAGR LEGLPLAART
401: VGGLLKDPMN EKHWRNIAES EIWQLQQDEQ GVLPVLQLSY QCLPPHLKRC FVFCSLFPKD HRFEGEHLVR LWMAEGYVAQ DNNMTMEDTG SRYFLDLVNR
501: SFFQEAPWRS KYVMHDLIHD LAQFISDGEF CRIDDESKEI PNTTRHLSTK LTDGTKLMEL SCYDKLRTLW INSRSIWFDS PVESPLFIQF EKLKNIRVLL
601: LKNYGLRELP ETIGELIHLR YLDISYNRYI RWLPESLCDL YNLRVLDLQD CKLQSFPHGM SKLINLMHLN AADEIISKIN NIGKLTSLQG LSSFKVLKDQ
701: GHEVAQLGSL KQLHGRLRIT NLENVESKQE ANKANLNNKQ YLDELVLGWT SDDGASLDGN ELVVSEEVLE GLQPHQALQR LMIVGYIGVR SPSWLQAQLL
801: ANLRTLILIN CKAWKDLSYI GQLPNLKKLY VKRMPAVKQI MTKVGHGFFG CRDRGKCFPC LEVLNFSSMP AWAEWSWADG RELFPCLLKL QIVQCPRLKR
901: MPPLPPSLKS LSLCKVGLTE VPRLWAEIDG SSSSMTVSEL KLYSLEKVEL EDIPKCEGLP CLG
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.