Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plastid | 44.97 | 94.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.27 | 80.18 |
| GSMUA_Achr3P22250_001 | Banana | cytosol | 85.46 | 79.34 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 83.56 | 78.3 |
| GSMUA_Achr3P22260_001 | Banana | cytosol | 78.41 | 74.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.47 | 72.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.4 | 62.77 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 78.08 | 60.54 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 51.34 | 41.17 |
| GSMUA_Achr6P21800_001 | Banana | cytosol, extracellular, nucleus | 48.66 | 35.57 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 50.78 | 32.66 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 32.21 | 31.48 |
| GSMUA_Achr6P08580_001 | Banana | cytosol | 31.66 | 31.2 |
| GSMUA_Achr10P... | Banana | extracellular | 34.79 | 30.85 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 36.13 | 29.61 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 35.79 | 29.49 |
| TraesCS2D01G359800.1 | Wheat | cytosol, extracellular, nucleus, plastid | 34.34 | 28.06 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 34.12 | 28.01 |
| HORVU2Hr1G087730.13 | Barley | cytosol | 35.23 | 27.63 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 28.52 | 26.4 |
| GSMUA_Achr9P17060_001 | Banana | endoplasmic reticulum, vacuole | 31.43 | 25.85 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 27.74 | 25.44 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 32.44 | 25.13 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 20.13 | 24.13 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.31 | 23.86 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 32.44 | 23.54 |
| GSMUA_Achr10P... | Banana | nucleus | 29.87 | 23.52 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 19.8 | 22.63 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 31.1 | 22.6 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 23.15 | 22.23 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 15.55 | 18.19 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr3G22320_001 | EnsemblPlants:GSMUA_Achr3P22320_001 | EnsemblPlants:GSMUA_Achr3T22320_001 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | UniProt:M0SGU8 | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PANTHER:PTHR23155 | SMART:SM00369 |
| SUPFAM:SSF52058 | SUPFAM:SSF52540 | UniParc:UPI00029675BF | SEG:seg | : | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22320_001]
Coordinates
chr3:-:23289819..23292500
Molecular Weight (calculated)
101579.0 Da
IEP (calculated)
5.696
GRAVY (calculated)
-0.309
Length
894 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWILAGLG SLGSSLIGRV KDQISDYLIG RVLEEPGVAD LDKLRNTLSG TERIIGRVEN MWIKDEDTKK RLKELLMKLK DTVYDADDLL DEIQFRVLKQ
101: QIELQGAQGY EASNQSSSSS GLHPSKRRKL YERVGRFFGR EDDVIRVGKI QMKLDEYTTY IKDFITTTDA DEKQMITSVV PRTTTSFPIE TQVFGRDEQL
201: NHLLEQLMKS ADGSGSSNSS ISTVTIVGIG GVGKTTLAQQ AYNHERVKDY FHPKVWLCVS DNFNVERLTK DIVESITEEK CDLSNLDTLQ VVVKKKLTSK
301: RFLLVLDDVW NEDGLKWERF CASLRYGEQG SKILVTTRSK KIAEMVGKPI PLGGLDEASY WEFFKKCAFG SEDAGEFPQL EAIAKKIAGR LKGLPLAART
401: VGGLLKAQMN EKHWRNIAGS EIWQLQHDEN GVLPVLQLSY QCLPPHLKRC FVFCSLFPKD NRFDGEHLVQ LWMAEGYVDQ DNMKDNMTLE AVGSDYFHEL
501: VNRSFFQEAP WGSTYVMHDL IHDLAQFISK GEFCRIDDVE SKEIPNTTRH LSATLTDGTK LMELSCYDKL RTLEINSKSF WFDFQDESPL FIQFEKLKNI
601: RVLILQNCGL QELPEKIGGL IHLRYLDISY NRYIKWLPES LCDLYNLRVL DLYECDLQSL PHGMSKLINL MHLNEEDKII SEINDVGKLT SLQGLCSFKV
701: LKDKGHEVAQ LGGLKQLHGQ LRITNLENVE SKQKAGMANL NNKQYLDELV LEWTTDDGFS LDGNELVVSE EVLEGLQPHQ ALKRLTIRGY IGVRSPSWLQ
801: TQLLANLITL DLYNCKAWED ISCIGQLQNL KKLSVKGMPA VKQISHGLST ESKFLPNLEE LVLENMVALE ELPSLGQLPC LKVLRIDQMS TMTK
101: QIELQGAQGY EASNQSSSSS GLHPSKRRKL YERVGRFFGR EDDVIRVGKI QMKLDEYTTY IKDFITTTDA DEKQMITSVV PRTTTSFPIE TQVFGRDEQL
201: NHLLEQLMKS ADGSGSSNSS ISTVTIVGIG GVGKTTLAQQ AYNHERVKDY FHPKVWLCVS DNFNVERLTK DIVESITEEK CDLSNLDTLQ VVVKKKLTSK
301: RFLLVLDDVW NEDGLKWERF CASLRYGEQG SKILVTTRSK KIAEMVGKPI PLGGLDEASY WEFFKKCAFG SEDAGEFPQL EAIAKKIAGR LKGLPLAART
401: VGGLLKAQMN EKHWRNIAGS EIWQLQHDEN GVLPVLQLSY QCLPPHLKRC FVFCSLFPKD NRFDGEHLVQ LWMAEGYVDQ DNMKDNMTLE AVGSDYFHEL
501: VNRSFFQEAP WGSTYVMHDL IHDLAQFISK GEFCRIDDVE SKEIPNTTRH LSATLTDGTK LMELSCYDKL RTLEINSKSF WFDFQDESPL FIQFEKLKNI
601: RVLILQNCGL QELPEKIGGL IHLRYLDISY NRYIKWLPES LCDLYNLRVL DLYECDLQSL PHGMSKLINL MHLNEEDKII SEINDVGKLT SLQGLCSFKV
701: LKDKGHEVAQ LGGLKQLHGQ LRITNLENVE SKQKAGMANL NNKQYLDELV LEWTTDDGFS LDGNELVVSE EVLEGLQPHQ ALKRLTIRGY IGVRSPSWLQ
801: TQLLANLITL DLYNCKAWED ISCIGQLQNL KKLSVKGMPA VKQISHGLST ESKFLPNLEE LVLENMVALE ELPSLGQLPC LKVLRIDQMS TMTK
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.