Factsheet for GSMUA_AchrUn_randomP28220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plasma membrane
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	55.7	57.68
GSMUA_AchrUn_...	Banana	cytosol	38.06	47.07
GSMUA_Achr3P22320_001	Banana	cytosol	72.04	37.47
GSMUA_Achr3P22250_001	Banana	cytosol	75.48	36.45
GSMUA_Achr3P22260_001	Banana	cytosol	73.76	36.41
GSMUA_Achr3P22280_001	Banana	cytosol	70.75	34.49
GSMUA_AchrUn_...	Banana	plastid	27.1	29.51
GSMUA_Achr3P22310_001	Banana	cytosol	69.89	29.15
GSMUA_Achr3P22290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	69.89	28.19
GSMUA_Achr6P21800_001	Banana	cytosol, extracellular, nucleus	53.12	20.2
GSMUA_Achr10P...	Banana	cytosol, golgi	31.18	19.44
TraesCS2A01G362300.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	36.56	18.58
GSMUA_Achr6P34690_001	Banana	extracellular	55.27	18.49
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	30.32	18.03
GSMUA_Achr10P...	Banana	extracellular	38.92	17.96
GSMUA_Achr6P08580_001	Banana	cytosol	33.33	17.09
GSMUA_Achr4P31030_001	Banana	cytosol	39.78	16.96
GSMUA_Achr7P21400_001	Banana	extracellular	39.35	16.87
TraesCS2D01G359800.1	Wheat	cytosol, extracellular, nucleus, plastid	37.42	15.9
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	33.33	15.9
VIT_15s0024g00440.t01	Wine grape	cytosol	31.83	15.9
GSMUA_Achr9P17060_001	Banana	endoplasmic reticulum, vacuole	36.56	15.64
TraesCS2B01G380100.1	Wheat	cytosol, extracellular, nucleus, plastid	36.13	15.43
GSMUA_Achr9P11390_001	Banana	extracellular	32.04	15.42
HORVU2Hr1G087730.13	Barley	cytosol	36.77	15.0
GSMUA_Achr3P09290_001	Banana	plastid	38.92	14.69
GSMUA_Achr6P32070_001	Banana	cytosol	34.41	14.57
GSMUA_Achr10P...	Banana	nucleus	33.76	13.83
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	33.98	13.69
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	35.27	13.33
VIT_15s0024g00450.t01	Wine grape	cytosol	20.86	12.7

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP28220_001	EnsemblPlants:GSMUA_AchrUn_randomT28220_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG28220_001	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23155	PFAM:PF00931	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000296587E
UniProt:M0UD30	MapMan:35.1	:	:	:	:

Description

Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28220_001]

Coordinates

chrchrUn_random:+:137168492..137170825

Molecular Weight (calculated)

53997.2 Da

IEP (calculated)

5.053

GRAVY (calculated)

-0.337

Length

465 amino acids

Sequence
(BLAST)

001: EKVKDYFHHK VWVCVSDDFN VERLTKEIIE SLTRNTLKWE RFCAPLRSEK CAFGSEYAGE CPQLEDIAKK IVSRLKGLPL AARMVGGLLK EGMNEKDWRN
101: IAESEIWQLP QNEEGVLPVL QLSYQCLPPH LKRCFVFCSL FPKDHRFYED DLVWLWMAEG YVDQANNMEM EDTGSRYFLD LFCRIDDDES KEIPNTTRHL
201: SATLTDGTKL MELSCYDKLR TLEINSKSFW FDFRLPEKIG GLIHLRYLDI SYNNYIRRLP ESLCGLYNLR VLDLLFCELQ SSLKQLHGQL RITNLENVES
301: KQEASKANLN NKQYLEKLVL EWTSDDGNEL IMSKEVLEGL QPHQALKRLT IRGYTGVRSP SWLQAQFKFL PNLEELVLEN MVALEELPSL GQLPCLKVLR
401: IDQMSTMTKV GHGFFGYRDQ GKCFPCLEEL SLEEIKLVDI PECEELPYLG QLPSLKVLRI EGMPQ

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.