Factsheet for GSMUA_Achr3P09290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	14.69	38.92
GSMUA_Achr10P...	Banana	extracellular	30.76	37.6
GSMUA_AchrUn_...	Banana	cytosol	13.47	36.97
GSMUA_Achr7P21400_001	Banana	extracellular	31.17	35.39
GSMUA_AchrUn_...	Banana	cytosol	10.47	34.31
GSMUA_Achr4P31030_001	Banana	cytosol	29.63	33.46
GSMUA_AchrUn_...	Banana	plastid	11.36	32.79
GSMUA_Achr3P22320_001	Banana	cytosol	23.54	32.44
GSMUA_Achr3P22250_001	Banana	cytosol	25.16	32.19
GSMUA_Achr6P08580_001	Banana	cytosol	23.46	31.86
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	29.63	31.63
GSMUA_Achr9P11390_001	Banana	extracellular	24.76	31.57
GSMUA_Achr3P22260_001	Banana	cytosol	24.03	31.42
GSMUA_Achr3P22280_001	Banana	cytosol	24.03	31.03
GSMUA_Achr6P21800_001	Banana	cytosol, extracellular, nucleus	30.6	30.83
VIT_15s0024g00440.t01	Wine grape	cytosol	23.05	30.5
GSMUA_Achr9P17060_001	Banana	endoplasmic reticulum, vacuole	26.87	30.45
GSMUA_Achr6P32070_001	Banana	cytosol	26.54	29.78
GSMUA_Achr10P...	Banana	cytosol, golgi	17.94	29.62
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	23.05	29.13
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.86	28.13
GSMUA_Achr6P34690_001	Banana	extracellular	31.33	27.77
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	27.6	27.64
VIT_15s0024g00450.t01	Wine grape	cytosol	17.05	27.49
GSMUA_Achr3P22310_001	Banana	cytosol	24.84	27.44
GSMUA_Achr10P...	Banana	nucleus	25.0	27.14
GSMUA_Achr3P22290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	24.51	26.19

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	ProteinID:ABY75802	ProteinID:ABY75802.1	ProteinID:ACF21694
ProteinID:ACF21694.1	ncoils:Coil	EMBL:EU239820	EMBL:EU616673	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	EnsemblPlantsGene:GSMUA_Achr3G09290_001	EnsemblPlants:GSMUA_Achr3P09290_001	EnsemblPlants:GSMUA_Achr3T09290_001	InterPro:IPR032675
InterPro:LRR_dom_sf	UniProt:M0SD46	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PRINTS:PR00364
PANTHER:PTHR23155	InterPro:RX-like_CC	SUPFAM:SSF52058	SUPFAM:SSF52540	UniParc:UPI000295011D	SEG:seg

Description

NBS-LRR type disease resistance protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G09290_001]

Coordinates

chr3:+:6699631..6703329

Molecular Weight (calculated)

139446.0 Da

IEP (calculated)

7.165

GRAVY (calculated)

-0.198

Length

1232 amino acids

Sequence
(BLAST)

0001: MAGVTSQAAA VFSLVNEVFN RSINLIVAEL RLQLNARAEL NNLQRTLLRT HSLLDEAKAR RMTDKSLVLW LMELKEWAYD ADDILDEYEA AAIRLKVTRS
0101: TFKRLIDHVI INVPLAHKVA DIRKRLNGVT LERELNLGAL EGSQRLDATE RGVTTSLLTE SCIVGRAQDK ENLIRLLLEP SDGAVPVVPI VGLGGAGKTT
0201: LSQLIFNDKR VEEHFPLRMW VCVSDDFDVK RITREITEYA TNGRFMDLTN LNMLQVNLKE EIRGTTFLLV LDDVWNEDPV KWESLLAPLD AGGRGSVVIV
0301: TTQSKKVADI TGTMEPYVLE ELTEDDSWSL IESHSFREAS CSTTNPRMEE IGRKIAKKIS GLPYGATAMG RYLRSKNGES SWREVLEAET WEMPPAASDV
0401: LSALRRSYDN LPPQLKLCFA FCALFPKGYR FRKDTLIHMW IAQNLIQSTE SKRSEDMAEE CFDDLVCRFF FRYSWGNYVM NDSVHDLARW VSLDEYFRAD
0501: EDSPLHISKP IRHLSWCSES ITNVLEDNNT GGDAVNPLSS LRTLLFLGQS EFRSSHLLDT MFRMLSRIRV LDFSNCVIRK LPSSVGNLKH LRYLGLSNTR
0601: IQRLPESVTR LCLLQTLLLE GCELCRLPRS MSRLVKLRQL KANPDVVADI AKVGRLIELQ ELPAYNVDKK KGHGIAELSA MNQLHGGLSI RNLQNVEKTR
0701: ESRKARLDEK QKLKLLELRW AEGRGDGECD RDRKVLKGLR PHPNLRELSI KYYGGTSSPR WMTDQYLPNM ETIRLRSCAR LAELPCLGQL HLLRHLHIDG
0801: MSQVRQINLQ FYGTGEVSGF PLLELLNICR MPSLEEWSEP RRNCCYFPRL HKLLIEDCPR LRNLPSLPPT LEELRISRAG LVDLPGFHGN GDVTTNVSLS
0901: SLHVSECREL RSLSEGLLQH HLVALKTAAF TDCDSLEFLP AEGFRTAISL ESLIMTNCPL PSSFLLPSSL EHLKLQPCLY PNNNEDSLST CFQNLTSLSF
1001: LDIKDCPNLS SFPPGPLCQL SALQHLSLVN CQRLQSIGFQ ALTFLESLTI QNCPRLTMSH SLVEVNNSSD TGLAFNITRW MRRRTGDDGL MLRHRVQNDS
1101: FFGGLLQHLT FLQFLKICQC PQLVTFTGEE EEKWRNLTSL QILHIVDCPN LEVLPANLQS LCSLSTLYIV RCPRIHAFPP GGVSMSLAHL VIHECPQLCQ
1201: RCDPPGGDDW PLIANVPRIC LGRTHPCRCS TT

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.