Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P08580_001 | Banana | cytosol | 34.77 | 41.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 15.64 | 36.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 12.14 | 35.11 |
| GSMUA_Achr10P... | Banana | extracellular | 31.83 | 34.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.17 | 34.3 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 32.11 | 32.17 |
| GSMUA_Achr3P22320_001 | Banana | cytosol | 25.85 | 31.43 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 27.51 | 31.34 |
| GSMUA_AchrUn_... | Banana | plastid | 12.14 | 30.91 |
| GSMUA_Achr3P22260_001 | Banana | cytosol | 26.68 | 30.79 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 27.23 | 30.64 |
| GSMUA_Achr3P22250_001 | Banana | cytosol | 27.05 | 30.53 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 29.53 | 29.42 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 20.06 | 29.22 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.25 | 28.96 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 24.38 | 27.18 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 30.45 | 26.91 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 30.45 | 26.87 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 18.86 | 26.21 |
| GSMUA_Achr6P21800_001 | Banana | cytosol, extracellular, nucleus | 29.07 | 25.84 |
| GSMUA_Achr10P... | Banana | nucleus | 26.95 | 25.82 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 27.23 | 25.67 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 23.37 | 22.78 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 29.07 | 22.73 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr9G17060_001 | EnsemblPlants:GSMUA_Achr9P17060_001 | EnsemblPlants:GSMUA_Achr9T17060_001 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | UniProt:M0U113 |
| InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 | PRINTS:PR00364 | PFscan:PS51450 | PANTHER:PTHR23155 |
| InterPro:RX-like_CC | SMART:SM00369 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | UniParc:UPI000295CE24 |
| SEG:seg | : | : | : | : | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G17060_001]
Coordinates
chr9:+:11600969..11604232
Molecular Weight (calculated)
123014.0 Da
IEP (calculated)
6.734
GRAVY (calculated)
-0.269
Length
1087 amino acids
Sequence
(BLAST)
(BLAST)
0001: MARWATVIQL FSLATYVGPV VEKITEKAVE GGVNGLQWVW ANLEALFDVE AELDKLRRTA KRISAILKDA EETRFIEDQT VREWLSDLKD FAFDVEDLVD
0101: EFPTVLDIAK LEKARLSPGS RKRRRPWDIL PPCLTWVYRK WTISVKIKEI KEKYEEIKQR RNDFQLREGE SRRRRQDSTQ QTPQHSGSLR GDSLVLGLEE
0201: KKNDILKHLS QGGGVSGAPN SSQREGRSVP VVAIIGPGGI GKTTLARLVF SDEEIERSSF LKIWVGVSRD FDVCRITKEI IKSITEKSCC GLSLDLLQRK
0301: LRELVLGKKF LLVLDGLCNN DLSFWDTLQA PLMVGGEGSR VLVTARSEQV LTYMRPRPSS IIWLNELGEN DSWLLFCSYA FRQAPTDHDV GREIVRRCHG
0401: LPLAIISIGG LLYSRTEEEW RSILSDIPDP EDEAHGILST LKVSYDYLPL HLKQCFAFCS IFPNGYEFDK EELVEFWVAV GLAKPRDGRS AEYIGYKYFD
0501: SLLRWSFFQG CNGRHHQKQK YKMPGLIHEL AQSVSAHECL RIENDASFSE SENARYALSC NFPMELPIFQ KLYQNKKLRT FILLGENGTP TKQVPRDLYT
0601: NLRCLRVLDL RRNELTELPD SIGNLIHLRY LNLLGTQIER LPESLSSLYN LQLLELGDCK KLVELPRGMS NLINLRYLGL HLDWENCRHR WSDIVMPPGL
0701: GRLTSLHTLS RFSVSSESGG GISELKGLKL RGEICISKLE IVDVRDAMEA SLGTKQHLET MMLQWTNCRS PASQSGGGRD VIEQLCPNSN LKHLWIENYK
0801: GAEFPSWLGD QSMNLETLRL YGCERSERLP PVGRLRNLKR LFLEGLHTVT DLGSLSGDGN FAGFPSLEMI TISNLKNLER GFELVQDEMP CLRKLVISDC
0901: SNLLQLPQLP NSLEDIEIRE CPALSTLPML SSLQQLVLTK CGLEIIESIH QFTSLSSLTI SQFPRLGSIT REHLQDLRSL RKLKIDHCDN FVSLSSQHLV
1001: SLETLEISQC HAFSSLAGEG LPASLKDLRL QSCGNLTSLP EEGMSASLQH LAIGGCPTLE QRCQVGGGDW HKIQHIPLRE IGENSTV
0101: EFPTVLDIAK LEKARLSPGS RKRRRPWDIL PPCLTWVYRK WTISVKIKEI KEKYEEIKQR RNDFQLREGE SRRRRQDSTQ QTPQHSGSLR GDSLVLGLEE
0201: KKNDILKHLS QGGGVSGAPN SSQREGRSVP VVAIIGPGGI GKTTLARLVF SDEEIERSSF LKIWVGVSRD FDVCRITKEI IKSITEKSCC GLSLDLLQRK
0301: LRELVLGKKF LLVLDGLCNN DLSFWDTLQA PLMVGGEGSR VLVTARSEQV LTYMRPRPSS IIWLNELGEN DSWLLFCSYA FRQAPTDHDV GREIVRRCHG
0401: LPLAIISIGG LLYSRTEEEW RSILSDIPDP EDEAHGILST LKVSYDYLPL HLKQCFAFCS IFPNGYEFDK EELVEFWVAV GLAKPRDGRS AEYIGYKYFD
0501: SLLRWSFFQG CNGRHHQKQK YKMPGLIHEL AQSVSAHECL RIENDASFSE SENARYALSC NFPMELPIFQ KLYQNKKLRT FILLGENGTP TKQVPRDLYT
0601: NLRCLRVLDL RRNELTELPD SIGNLIHLRY LNLLGTQIER LPESLSSLYN LQLLELGDCK KLVELPRGMS NLINLRYLGL HLDWENCRHR WSDIVMPPGL
0701: GRLTSLHTLS RFSVSSESGG GISELKGLKL RGEICISKLE IVDVRDAMEA SLGTKQHLET MMLQWTNCRS PASQSGGGRD VIEQLCPNSN LKHLWIENYK
0801: GAEFPSWLGD QSMNLETLRL YGCERSERLP PVGRLRNLKR LFLEGLHTVT DLGSLSGDGN FAGFPSLEMI TISNLKNLER GFELVQDEMP CLRKLVISDC
0901: SNLLQLPQLP NSLEDIEIRE CPALSTLPML SSLQQLVLTK CGLEIIESIH QFTSLSSLTI SQFPRLGSIT REHLQDLRSL RKLKIDHCDN FVSLSSQHLV
1001: SLETLEISQC HAFSSLAGEG LPASLKDLRL QSCGNLTSLP EEGMSASLQH LAIGGCPTLE QRCQVGGGDW HKIQHIPLRE IGENSTV
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.