Factsheet for GSMUA_AchrUn_randomP25350_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
extracellular 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22320_001	Banana	cytosol	94.15	44.97
GSMUA_Achr3P22280_001	Banana	cytosol	88.76	39.73
GSMUA_Achr3P22250_001	Banana	cytosol	89.46	39.67
GSMUA_Achr3P22260_001	Banana	cytosol	83.14	37.69
GSMUA_AchrUn_...	Banana	cytosol	36.77	34.97
GSMUA_Achr3P22290_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	79.39	29.4
GSMUA_AchrUn_...	Banana	cytosol	25.76	29.26
GSMUA_AchrUn_...	Banana	cytosol	29.51	27.1
GSMUA_Achr6P21800_001	Banana	cytosol, extracellular, nucleus	46.14	16.11
GSMUA_Achr6P34690_001	Banana	extracellular	51.76	15.9
GSMUA_Achr3P22310_001	Banana	cytosol	41.22	15.78
GSMUA_Achr6P08580_001	Banana	cytosol	32.55	15.33
GSMUA_Achr10P...	Banana	extracellular	35.6	15.08
GSMUA_Achr4P31030_001	Banana	cytosol	37.94	14.85
TraesCS2A01G362300.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	31.62	14.75
GSMUA_Achr7P21400_001	Banana	extracellular	35.36	13.92
GSMUA_Achr9P11390_001	Banana	extracellular	30.91	13.66
TraesCS2D01G359800.1	Wheat	cytosol, extracellular, nucleus, plastid	34.43	13.44
HORVU2Hr1G087730.13	Barley	cytosol	35.83	13.42
TraesCS2B01G380100.1	Wheat	cytosol, extracellular, nucleus, plastid	33.96	13.31
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	33.72	12.48
GSMUA_Achr9P17060_001	Banana	endoplasmic reticulum, vacuole	30.91	12.14
GSMUA_Achr8P21580_001	Banana	cytosol, plastid	27.63	12.1
GSMUA_Achr6P32070_001	Banana	cytosol	29.51	11.48
GSMUA_Achr10P...	Banana	nucleus	30.45	11.45
GSMUA_Achr3P09290_001	Banana	plastid	32.79	11.36
GSMUA_Achr6P32040_001	Banana	cytosol, extracellular, nucleus, plastid	32.32	11.22
GSMUA_Achr10P...	Banana	cytosol, golgi	17.33	9.92
GSMUA_Achr10P...	Banana	cytosol, golgi, mitochondrion	17.8	9.72
VIT_15s0024g00440.t01	Wine grape	cytosol	19.67	9.02
VIT_15s0024g00450.t01	Wine grape	cytosol	12.88	7.2

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP25350_001	EnsemblPlants:GSMUA_AchrUn_randomT25350_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG25350_001	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC
InterPro:P-loop_NTPase	PANTHER:PTHR23155	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SUPFAM:SSF52058
SUPFAM:SSF52540	UniParc:UPI0002965941	UniProt:M0UC93	MapMan:26.8.2.1	:	:

Description

Putative NB-ARC domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG25350_001]

Coordinates

chrchrUn_random:-:125200592..125203016

Molecular Weight (calculated)

48405.4 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.281

Length

427 amino acids

Sequence
(BLAST)

001: MSSWILAGLG SLGSSLIGRV KDQISDYLIG RVLEDPGVAD LHELRNTLSG TERIIGRVEN MWIKDEDKKK RLKELLMKLK DTVYDADDLL DEIQFRVLKQ
101: QIEQQGAQGR FFGREYDVIR MITSVVPRTT TSFPIETQVF GRDEQLNHLL EQLMKSADGS GSSNSSISTV TIVGIGGVGK TTLAQQAYNH ERVKDYFHPK
201: VWLCVSDNFN EVKEKLTSKR YGEPGSKILV TTRSKKIAEM VGNPIPLYLE AIAKKIAGRL KGLPLAARTQ DEEGVLPVLQ LSYQSPVGSK YVMHDLIHDL
301: AQFISEGEFC RIDDDDHWFG FFESPLFIQF EKLKNIRWLT ESLCDLYNLR VLDLSECDLQ SLPHGMSNLK QLHGQLRITN LENEVLEGLQ PHQALKRLTI
401: RGYIGVRSPS WLQTQLLANL ITLDLYN

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.