Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94930 | Sorghum | cytosol | 41.68 | 41.77 |
| Os03t0324600-01 | Rice | cytosol | 46.64 | 39.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.64 | 35.63 |
| GSMUA_Achr9P17060_001 | Banana | endoplasmic reticulum, vacuole | 41.68 | 34.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.09 | 33.33 |
| GSMUA_AchrUn_... | Banana | plastid | 15.33 | 32.55 |
| GSMUA_Achr3P22320_001 | Banana | cytosol | 31.2 | 31.66 |
| GSMUA_Achr10P... | Banana | extracellular | 34.95 | 31.45 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 32.86 | 30.85 |
| GSMUA_Achr3P22260_001 | Banana | cytosol | 31.09 | 29.94 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 31.97 | 29.74 |
| GSMUA_Achr3P22250_001 | Banana | cytosol | 31.09 | 29.28 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 30.65 | 29.14 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 34.4 | 28.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 11.69 | 28.19 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 33.3 | 27.83 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 21.94 | 26.68 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 34.73 | 25.61 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 30.32 | 25.21 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 21.72 | 25.19 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 31.2 | 24.54 |
| GSMUA_Achr10P... | Banana | nucleus | 30.65 | 24.49 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 31.86 | 23.46 |
| GSMUA_Achr6P21800_001 | Banana | cytosol, extracellular, nucleus | 30.65 | 22.73 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 31.75 | 20.72 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 24.92 | 20.27 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr6G08580_001 | EnsemblPlants:GSMUA_Achr6P08580_001 | EnsemblPlants:GSMUA_Achr6T08580_001 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | UniProt:M0T5A7 | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 |
| PRINTS:PR00364 | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF752 | InterPro:RX-like_CC | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000295D48D | SEG:seg | : | : | : | : |
Description
Putative disease resistance protein RGA3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G08580_001]
Coordinates
chr6:-:5708593..5711536
Molecular Weight (calculated)
103075.0 Da
IEP (calculated)
7.601
GRAVY (calculated)
-0.313
Length
907 amino acids
Sequence
(BLAST)
(BLAST)
001: MDREELLRNL VSKLGELAPL VELWNKGFGW LCSTVGSEIS RLLSVEDDVQ KLHRTLLRAQ SLLSDAEDRR YIVDESVKGW LLELKAVAFD ADDLLDRYRT
101: LLDVAKLAKD GDSRKRKRFW FGFIGPDLGL LQRRSIGIEV AKIQDRFKEI ADGRNNLQLK PSDGSRRAKS SPDSVPPLAV ACFDRSNVVG RDEDCERIVR
201: ALTKECETVP SVIPIYGVAG VGKTALAQLG KGPAVAVGDD EYFDLKIWVS LPKGCDVITA TKEIVDDITK KTCNDRSLNI LHHRLKELLD GKKFLLVLDN
301: FWAEDCTFWD TLRAPLRYGA KGSKVLITTR SKVVSSRMTT QPVLPLEGLN ESDCWALLRG VAFPHPEETV VSNLEEIGRK IVSRCQGSPL AAKSLGAILY
401: DENDEEIWES IHQEMWALEE NNNEILSRLM ISYRHLTYPL KQCFAYCSLF PNGYEFDKDE VVQMWIAEGL VQRNGPRKPE AIGGRYFDRL LWGSFFERSH
501: KQKYRMPSLI HDLARLVSKN ELLIVEDGVL HDPPERPRYA SLFHPNLSTV TLEKLYAYER LRTLRSYGES KVGQVPKDLF FKLKWLRLLD LSNSDIEELP
601: DSVGDLLLLR YLGLRGTGIR RLPESVSNLY NLKTLELSEC DKLSELPKGT SKLVNLRHLG LHLDWEKDAD LNSMPPGIGR LTSLQTLSRF TVTAGSECNI
701: GELKDLNLKG ELCISKLEKM ADAGDAGAAN LMGKKYIRKL ALRWTAQPLQ TSADENRRRN PHEQVADRLR PHWNLEHLWI VNYPGRTFPN WMDDRSLWKL
801: ETMRLSGCVG CERFPSLGRL PRLKKLHVEK MDRLRNLGNI LGFPTLEVLT IRNMLILEKL FEVEAGEIPT LRELNLVSCP KLRELIPLPS TTIKLEISDC
901: ELLNSAS
101: LLDVAKLAKD GDSRKRKRFW FGFIGPDLGL LQRRSIGIEV AKIQDRFKEI ADGRNNLQLK PSDGSRRAKS SPDSVPPLAV ACFDRSNVVG RDEDCERIVR
201: ALTKECETVP SVIPIYGVAG VGKTALAQLG KGPAVAVGDD EYFDLKIWVS LPKGCDVITA TKEIVDDITK KTCNDRSLNI LHHRLKELLD GKKFLLVLDN
301: FWAEDCTFWD TLRAPLRYGA KGSKVLITTR SKVVSSRMTT QPVLPLEGLN ESDCWALLRG VAFPHPEETV VSNLEEIGRK IVSRCQGSPL AAKSLGAILY
401: DENDEEIWES IHQEMWALEE NNNEILSRLM ISYRHLTYPL KQCFAYCSLF PNGYEFDKDE VVQMWIAEGL VQRNGPRKPE AIGGRYFDRL LWGSFFERSH
501: KQKYRMPSLI HDLARLVSKN ELLIVEDGVL HDPPERPRYA SLFHPNLSTV TLEKLYAYER LRTLRSYGES KVGQVPKDLF FKLKWLRLLD LSNSDIEELP
601: DSVGDLLLLR YLGLRGTGIR RLPESVSNLY NLKTLELSEC DKLSELPKGT SKLVNLRHLG LHLDWEKDAD LNSMPPGIGR LTSLQTLSRF TVTAGSECNI
701: GELKDLNLKG ELCISKLEKM ADAGDAGAAN LMGKKYIRKL ALRWTAQPLQ TSADENRRRN PHEQVADRLR PHWNLEHLWI VNYPGRTFPN WMDDRSLWKL
801: ETMRLSGCVG CERFPSLGRL PRLKKLHVEK MDRLRNLGNI LGFPTLEVLT IRNMLILEKL FEVEAGEIPT LRELNLVSCP KLRELIPLPS TTIKLEISDC
901: ELLNSAS
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.