Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plastid | 37.69 | 83.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.75 | 81.29 |
| GSMUA_Achr3P22320_001 | Banana | cytosol | 74.42 | 78.41 |
| GSMUA_Achr3P22250_001 | Banana | cytosol | 78.56 | 76.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.41 | 73.76 |
| GSMUA_Achr3P22280_001 | Banana | cytosol | 74.42 | 73.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.09 | 72.87 |
| GSMUA_Achr3P22290_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 74.73 | 61.06 |
| GSMUA_Achr3P22310_001 | Banana | cytosol | 52.97 | 44.75 |
| GSMUA_Achr6P21800_001 | Banana | cytosol, extracellular, nucleus | 47.66 | 36.71 |
| GSMUA_Achr6P34690_001 | Banana | extracellular | 50.85 | 34.46 |
| GSMUA_Achr10P... | Banana | extracellular | 35.14 | 32.84 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 31.85 | 32.79 |
| GSMUA_Achr6P08580_001 | Banana | cytosol | 29.94 | 31.09 |
| GSMUA_Achr7P21400_001 | Banana | extracellular | 35.46 | 30.78 |
| GSMUA_Achr4P31030_001 | Banana | cytosol | 35.56 | 30.71 |
| TraesCS2D01G359800.1 | Wheat | cytosol, extracellular, nucleus, plastid | 33.76 | 29.07 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 33.23 | 28.74 |
| GSMUA_Achr9P11390_001 | Banana | extracellular | 28.66 | 27.95 |
| HORVU2Hr1G087730.13 | Barley | cytosol | 33.65 | 27.81 |
| GSMUA_Achr10P... | Banana | cytosol, golgi | 21.34 | 26.94 |
| GSMUA_Achr9P17060_001 | Banana | endoplasmic reticulum, vacuole | 30.79 | 26.68 |
| GSMUA_Achr8P21580_001 | Banana | cytosol, plastid | 27.6 | 26.67 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 31.63 | 25.82 |
| GSMUA_Achr10P... | Banana | cytosol, golgi, mitochondrion | 21.23 | 25.58 |
| GSMUA_Achr10P... | Banana | nucleus | 30.68 | 25.46 |
| GSMUA_Achr6P32070_001 | Banana | cytosol | 29.62 | 25.41 |
| GSMUA_Achr6P32040_001 | Banana | cytosol, extracellular, nucleus, plastid | 31.63 | 24.23 |
| GSMUA_Achr3P09290_001 | Banana | plastid | 31.42 | 24.03 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 22.29 | 22.56 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 14.97 | 18.46 |
Protein Annotations
| Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0043531 | EnsemblPlantsGene:GSMUA_Achr3G22260_001 | EnsemblPlants:GSMUA_Achr3P22260_001 | EnsemblPlants:GSMUA_Achr3T22260_001 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | UniProt:M0SGU2 | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PFAM:PF00931 | PFAM:PF13855 | PRINTS:PR00364 | PANTHER:PTHR23155 | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | UniParc:UPI000295D36C | SEG:seg | : | : | : |
Description
Putative disease resistance protein RGA1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22260_001]
Coordinates
chr3:-:23170675..23173641
Molecular Weight (calculated)
107205.0 Da
IEP (calculated)
5.118
GRAVY (calculated)
-0.283
Length
942 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSWILAGLG WLGESFIRSL KDQIGDYLIR WLLEELGVVA GLGWLRDSIG SLMDNIRDSA IRGFLDDLGV GDDLGELMNT LTRTMHIIGE VENKWIEDED
101: TKKRLKEWMM ELKDTVYDAD DLLDEIQLWV LKQQIEQQGA QRDEASNQSS SSSGLPPRKK MKISVSKVAS SLFGRGDDVN RARKIQMKLD EITTYIKDFI
201: TTLDADEKQM IASVVPRTTT SFPIETQVFG REEQLNHLLE QLMKSADGSG SSNSSISTLT IVGVGGVGKT TLAQQAYNHE RVQDYFQPKV WLCVSDNFNV
301: ERLTKDIIEF ITEEKCDLSN LDTLQEVVKE KLTSKRFLLV LDDVWNEDSL KWERFCAPLR SAVPGSKILV TTRSKKIAEM VGNPIPLEGL DEASCWKLFK
401: KCAFGSEDAG EFPHLEAIAK KIEGRLKGLP LAARVIGELL KAQMNEKHWS NIAESEIWQL QQDEQGDLPV LQLSYQCLPS HLKRCFVFCS LFPKDHRFDG
501: EHLVRLWMAE GYVAQDNNMT MEDTGSRYFL DLVNRSFFQE TPWGSTYVMH DLIHDLAQFI SEGEFCRIDD ESKEIPNTTR HLSTTLTDGT KLIELSCYDK
601: LRTLMINYKS HWFGFGVESP LFIQFEKLKN IRVLILQNCG LRELPEKISG LIHLRYLDIS YNCQIWRLPE SLCGLYNLQV LDLFQCPLQS FPHGMSKLIN
701: LMHLNAADEI IFKINDIGKL TSLQRLSSFI ALKDQRHKVA QLDGLTQLHG ELRITNLENV ESKQEASKAN LNNKQYLDAL ALQWTSDDGS NLNGNELVMS
801: EEVLEGLQPH QALKRLTIRG YNGVRPPSWL QAQLLSNLIT LELENCTAWE DLSCIGQLPN LKNLYVKGMP AGMSAVTKVG HEFFGCRDQG KCFPCLEELK
901: FSDMPAWQEW SWADGGELFP CLRRLEIVRC PKLQRLPPLP PL
101: TKKRLKEWMM ELKDTVYDAD DLLDEIQLWV LKQQIEQQGA QRDEASNQSS SSSGLPPRKK MKISVSKVAS SLFGRGDDVN RARKIQMKLD EITTYIKDFI
201: TTLDADEKQM IASVVPRTTT SFPIETQVFG REEQLNHLLE QLMKSADGSG SSNSSISTLT IVGVGGVGKT TLAQQAYNHE RVQDYFQPKV WLCVSDNFNV
301: ERLTKDIIEF ITEEKCDLSN LDTLQEVVKE KLTSKRFLLV LDDVWNEDSL KWERFCAPLR SAVPGSKILV TTRSKKIAEM VGNPIPLEGL DEASCWKLFK
401: KCAFGSEDAG EFPHLEAIAK KIEGRLKGLP LAARVIGELL KAQMNEKHWS NIAESEIWQL QQDEQGDLPV LQLSYQCLPS HLKRCFVFCS LFPKDHRFDG
501: EHLVRLWMAE GYVAQDNNMT MEDTGSRYFL DLVNRSFFQE TPWGSTYVMH DLIHDLAQFI SEGEFCRIDD ESKEIPNTTR HLSTTLTDGT KLIELSCYDK
601: LRTLMINYKS HWFGFGVESP LFIQFEKLKN IRVLILQNCG LRELPEKISG LIHLRYLDIS YNCQIWRLPE SLCGLYNLQV LDLFQCPLQS FPHGMSKLIN
701: LMHLNAADEI IFKINDIGKL TSLQRLSSFI ALKDQRHKVA QLDGLTQLHG ELRITNLENV ESKQEASKAN LNNKQYLDAL ALQWTSDDGS NLNGNELVMS
801: EEVLEGLQPH QALKRLTIRG YNGVRPPSWL QAQLLSNLIT LELENCTAWE DLSCIGQLPN LKNLYVKGMP AGMSAVTKVG HEFFGCRDQG KCFPCLEELK
901: FSDMPAWQEW SWADGGELFP CLRRLEIVRC PKLQRLPPLP PL
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.