Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0324600-01 | Rice | cytosol | 55.25 | 46.6 |
| GSMUA_Achr6P08580_001 | Banana | cytosol | 41.77 | 41.68 |
| OQU78013 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 18.78 | 25.95 |
| EES03777 | Sorghum | cytosol | 30.94 | 25.18 |
| KXG22249 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.61 | 24.98 |
| KXG34889 | Sorghum | cytosol | 26.3 | 24.49 |
| KXG38154 | Sorghum | endoplasmic reticulum, plasma membrane | 27.73 | 23.22 |
| EES11060 | Sorghum | nucleus | 24.09 | 22.68 |
| OQU91449 | Sorghum | mitochondrion | 19.01 | 22.16 |
| OQU91451 | Sorghum | cytosol, mitochondrion | 25.3 | 20.86 |
| KXG22004 | Sorghum | cytosol | 22.21 | 18.17 |
Protein Annotations
| Gene3D:1.10.8.430 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:C5X1Q8 | ncoils:Coil |
| EnsemblPlants:EER94930 | ProteinID:EER94930 | ProteinID:EER94930.2 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase | PFAM:PF00931 |
| PRINTS:PR00364 | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF752 | EnsemblPlantsGene:SORBI_3001G387500 | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI00081AE99E | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:67462799..67466637
Molecular Weight (calculated)
103893.0 Da
IEP (calculated)
7.244
GRAVY (calculated)
-0.330
Length
905 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRLSNMLGD RPLKSIFAAL GLPDKIGGAV IDALCSRGAR LWNVEEEADK LRRTKERIRA VLEDAEQRRF VDHDSVRLWL RELRAAAFDV DALLDRLGTV
101: TAVSRLAAAE QSRKRKRLWP SVELGPRQRW ELDDKIAQIN ERLDEINRGR KRYRLQAGDG RRTTAQPMQR PRFLESAAHR DERPIGRNEE MEKIVRALFS
201: DSTEMGVISI WGTAGIGKTA LAQSVCKDPQ VQNFFTDKIW VWLPDRCDVR KATKMIIEAV TSKKCELLSL DILQQRLHDH LHKKHFLLVI DNLWAEGFQF
301: WEFMRPSLTG GADGSKVLIT TQHERVSRMS STILNIHLER MEDEECWQIL KLYAFLGWSS RDQHDLESIG RRIATNCQGS PLAAKSLGVL LSDTHGDREQ
401: WESILGEMQI LEDDKNTNNI LPSLQISYQH LSYHLKQCFA FCSILPPGVE FEKDELVRLW IADGLVKSNG RKRVEMEAGR CFNELLWRSF FEISHNFPNQ
501: KFRVPSLMLE LAQLVSKHES LTLSPDSSPV AEADHPEWIR YTTILCPKDE PLAFDKIYHY ENSRLLKLCP TMKLPLNQVP SALFSKLTCL RALDLSYTEL
601: DFLPDSVGFC LHLRYLNLRN TLIKTLPKTV CNLFNLQTLD LRDCYWLMDL PADMSRLVNL RHLSLHIDWD RVTAFRSMPS GIDRLQSLQT LSRFIVVSKD
701: GGKCNINELK NLKIRGELCL LNLEAATNDG VMEANLRGKE YLRELMLKWS EDTCKDEQQQ GIENSETVIE ALCPHTSLKH LRIENYPGRR FPSCFENLSS
801: LESLEIISCP RLTQFSVKMM QSLRNLKIRQ CADLAVLPRG LCNLESLHCL EADGAPNLRI SAVDILPRNI SQLVVSGCDA LERWCVEEGA ERVQQIPDVR
901: IQFNN
101: TAVSRLAAAE QSRKRKRLWP SVELGPRQRW ELDDKIAQIN ERLDEINRGR KRYRLQAGDG RRTTAQPMQR PRFLESAAHR DERPIGRNEE MEKIVRALFS
201: DSTEMGVISI WGTAGIGKTA LAQSVCKDPQ VQNFFTDKIW VWLPDRCDVR KATKMIIEAV TSKKCELLSL DILQQRLHDH LHKKHFLLVI DNLWAEGFQF
301: WEFMRPSLTG GADGSKVLIT TQHERVSRMS STILNIHLER MEDEECWQIL KLYAFLGWSS RDQHDLESIG RRIATNCQGS PLAAKSLGVL LSDTHGDREQ
401: WESILGEMQI LEDDKNTNNI LPSLQISYQH LSYHLKQCFA FCSILPPGVE FEKDELVRLW IADGLVKSNG RKRVEMEAGR CFNELLWRSF FEISHNFPNQ
501: KFRVPSLMLE LAQLVSKHES LTLSPDSSPV AEADHPEWIR YTTILCPKDE PLAFDKIYHY ENSRLLKLCP TMKLPLNQVP SALFSKLTCL RALDLSYTEL
601: DFLPDSVGFC LHLRYLNLRN TLIKTLPKTV CNLFNLQTLD LRDCYWLMDL PADMSRLVNL RHLSLHIDWD RVTAFRSMPS GIDRLQSLQT LSRFIVVSKD
701: GGKCNINELK NLKIRGELCL LNLEAATNDG VMEANLRGKE YLRELMLKWS EDTCKDEQQQ GIENSETVIE ALCPHTSLKH LRIENYPGRR FPSCFENLSS
801: LESLEIISCP RLTQFSVKMM QSLRNLKIRQ CADLAVLPRG LCNLESLHCL EADGAPNLRI SAVDILPRNI SQLVVSGCDA LERWCVEEGA ERVQQIPDVR
901: IQFNN
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.