CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010266_P001	Maize	plastid	80.76	80.52
Os05t0414300-02	Rice	cytosol	61.53	62.29
TraesCS3D01G425500.1	Wheat	cytosol	37.56	21.69
TraesCS3A01G432200.1	Wheat	cytosol, mitochondrion	37.1	21.41
TraesCS3B01G468200.1	Wheat	cytosol	36.95	21.34
HORVU3Hr1G094660.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.03	20.89
KXG22004	Sorghum	cytosol	34.35	20.34
EER94930	Sorghum	cytosol	25.95	18.78
KXG34889	Sorghum	cytosol	26.87	18.11
KXG22249	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.77	17.58
KXG38154	Sorghum	endoplasmic reticulum, plasma membrane	28.86	17.48
EES11060	Sorghum	nucleus	24.27	16.55
EES03777	Sorghum	cytosol	27.94	16.46
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	27.02	15.34
OQU91451	Sorghum	cytosol, mitochondrion	24.89	14.85
OQU91449	Sorghum	mitochondrion	16.95	14.3
VIT_15s0024g00440.t01	Wine grape	cytosol	18.78	13.21
VIT_15s0024g00450.t01	Wine grape	cytosol	7.94	6.81

Protein Annotations

Gene3D:3.40.50.300	Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:8076961	UniProt:A0A1Z5R2L5	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:NB-ARC	EnsemblPlants:OQU78013	ProteinID:OQU78013	ProteinID:OQU78013.1	InterPro:P-loop_NTPase	PFAM:PF00931
PRINTS:PR00364	PANTHER:PTHR23155	EnsemblPlantsGene:SORBI_3009G138100	SUPFAM:SSF52058	SUPFAM:SSF52540	unigene:Sbi.476
UniParc:UPI000B8B9A90	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:49503582..49506047

Molecular Weight (calculated)

73379.5 Da

IEP (calculated)

8.170

GRAVY (calculated)

-0.190

Length

655 amino acids

Sequence
(BLAST)

001: MLAPAPWPVS QDVAALADRA SALSRAAAGP RNPLGALAAA LHRIQPVARE LERWRWLTPG DPEVPDLHAW LFELRNAVAD AEDILDELHS RRQVGPPLSA
101: CVYATFRGPG RKLRRLAERL DRARDDSERL RPGRASAAAG CGVRSPNRVT GSVLAERKVF GRGEECDSIV ARLVDDCEET CRSVAPVVAV VGHGGVGKTT
201: VAQCVYNDAR IEARFGMRAW VCVWDRSDEV ELTREILQSI GCADDAPCDD GLSSLDSLQE ELEKLVASKR FLLVLDDVWI DEGKTEKENR SMWKKVLAPL
301: RSAAIGSKVL VTTRMKLVAE VLNAAHVVSL DRLRSSDCWL LLKEVALGGQ PMDFPPELQE ILGAIVANVK GLPLATKAIG QMISSTRSTR KWRALMNTEI
401: SDNIIISSLQ LSYQQLPGHL QRCFAYCSIF PTTWRFNRYD LVKMWMALGF IQPPTDEGKG MEDLGQKYFD DLLSRSFFGT ANKDQQTYYF LDDLMHSLAQ
501: HFSAHDCMKI NEDVPVVIPP TVRHLSISTD YLPQLKSKYR LGRLRTLLVL RSPSLSSSHF PRKLLAKFKN LRVLDLSESD IAELPETISQ LVHLHYLAFS
601: GIANKLPKSI YRLKQLEEKE LWGEGLTCKV VWLIRQPASW CAFRIKLYNQ SQDQT

Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)

0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS

Arabidopsis Description

Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.