Factsheet for TraesCS3A01G432200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	secretory
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G468200.1	Wheat	cytosol	91.37	91.45
TraesCS3D01G425500.1	Wheat	cytosol	91.01	91.09
HORVU3Hr1G094660.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.49	84.87
TraesCS1A01G259500.3	Wheat	cytosol	41.85	42.79
TraesCS2A01G030200.1	Wheat	cytosol	34.45	41.38
TraesCS2A01G029600.1	Wheat	cytosol	23.44	41.24
TraesCS2A01G030000.2	Wheat	cytosol	39.65	40.18
TraesCS2A01G029800.1	Wheat	cytosol	39.47	40.11
Os05t0414300-02	Rice	cytosol	21.41	37.56
Zm00001d010266_P001	Maize	plastid	21.5	37.14
OQU78013	Sorghum	cytosol, mitochondrion, nucleus, plastid	21.41	37.1
TraesCS2A01G031000.2	Wheat	cytosol, endoplasmic reticulum, nucleus	36.12	36.84
TraesCS2A01G031400.1	Wheat	plastid	37.27	34.42
TraesCS5A01G440600.1	Wheat	cytosol	19.47	33.74
TraesCS7A01G399400.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.21	32.59
TraesCS7A01G399600.1	Wheat	plastid	19.82	31.78
TraesCS2A01G362300.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	24.05	29.84
TraesCS1A01G309500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.28	28.41
VIT_15s0024g00400.t01	Wine grape	cytosol, plasma membrane	28.37	27.9
TraesCS3A01G333900.1	Wheat	cytosol, plastid	28.81	27.81
VIT_15s0024g00440.t01	Wine grape	cytosol	22.29	27.18
TraesCS7A01G399300.1	Wheat	cytosol	11.54	23.91
VIT_15s0024g00450.t01	Wine grape	cytosol	15.59	23.17

Protein Annotations

EnsemblPlants:TraesCS3A01G432200.1	EnsemblPlantsGene:TraesCS3A01G432200	Gene3D:3.40.50.300	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0043531	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:NB-ARC	InterPro:P-loop_NTPase
ncoils:Coil	PANTHER:PTHR23155	PANTHER:PTHR23155:SF880	PFAM:PF00931	PRINTS:PR00364	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF52540	MapMan:35.1	:

Description

No Description!

Coordinates

chr3A:-:673445240..673448647

Molecular Weight (calculated)

126981.0 Da

IEP (calculated)

8.198

GRAVY (calculated)

-0.116

Length

1135 amino acids

Sequence
(BLAST)

0001: MAPPSAAGAA GAAARWLVSP LLQCLGDRAR SFADDLARYL PGGSGDAPAD LARLSGELLR LQVNAADVER ARRRPSDPAL VAWLHRLRDA AHDADDLLDD
0101: IHYGRLADSL AAPRHKLRRI LDFSLSICRR LFRSDEPLNR LPSVLENLTD ASAAYTEMAH RGLKLDAPAS SWLGNESATS PRLGNFSSAL PVDSTFFGRG
0201: RELADLLERL VGCNGPAQLG NQGVPVVAIV GDGGIGKTTL AQMAFNDVSI QAHFDLRMWV CVSSCMHVME LTREILQLAK EGKDYRGVLN FNYLQESLVS
0301: AVAGKRFLLI LDDVWNDNGS ELWQNVDQGK ALLSPLQNGQ QGSRIVVTTR TKMVADMLGV RIPMMLVGLG AEEHWLLLKK HALVCEESSG YSQLKEIGRK
0401: IALKLRGSPL AAKVIGGTLS GTRRARDWNS ILETDIHGDI VATLLSSYYH LPPHLQCCFA YCSIFPKNWK FEPKKLVRMW ISQGFIQMEN GRSMEDCGKE
0501: YFKQLLLRSF FQTVKQGNKR LYLMHDLIHD LAQMVSDGDC GRVEGDMSKN ILPTIRHLSV SSNCLGKIKN QNYLKRLRTL IVFRDPLMPP SPIPDGFLAE
0601: IKNVRTLDFT GCDISKLPEA IDVLTHLRYI ALPDTIKTIP ESVSRLLHLQ TFDIPKKCQL DGFPEGMHQL TSLRHLGIES KYISTIRGIG SLVNLQGSVE
0701: FHVKKEKGRT LEELKDMRDL HGLLSIKNLE NVQCKEEACE AQLANKQHVN ILKFEWSVAN LDFGPNIDAE VLNCLQPHPN LEELHIARYK GASSPRWLQL
0801: KTLSHLKCLY LANCRRWEWL PPLGQLPSLR VLHLKEMNSV AEIGPSFYGG LMAFQSLKDL EFDDMPNLVR WTGETGNSFL PSLQKLKISN CPKLDEVPLL
0901: PYTIKRVTVE RSKVSHLKLS PHCSSRSSKF MLEISSTSIL SEGFLLHQQH LEATEVLNIR GCWGSVAAEK FKLLTSLRKL RLWQCDMDDA RLNLCLQHLT
1001: VLASLEIIDC KNIKSFVLPV GSRYFTTLQH LCFENCLNLS SLATLESSIF LKSLIIERCP MVTAVSLPSE MKRMTSLNKL SISHCQGFQS LPSSIPPSLE
1101: FLHLVGCDSR LTEGLLERQG PEWEKIAFIS QITVY

Best Arabidopsis Sequence Match ( AT3G07040.1 )
(BLAST)

001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS

Arabidopsis Description

RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.