Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G044700.1 | Wheat | cytosol, nucleus, plastid | 93.55 | 78.86 |
| TraesCS2A01G029600.1 | Wheat | cytosol | 50.48 | 73.95 |
| TraesCS2A01G031000.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 84.13 | 71.43 |
| TraesCS2A01G031400.1 | Wheat | plastid | 74.81 | 57.53 |
| TraesCS2A01G029800.1 | Wheat | cytosol | 50.69 | 42.88 |
| TraesCS2A01G030000.2 | Wheat | cytosol | 50.26 | 42.41 |
| TraesCS3A01G432200.1 | Wheat | cytosol, mitochondrion | 41.38 | 34.45 |
| TraesCS1A01G259500.3 | Wheat | cytosol | 39.15 | 33.33 |
| TraesCS5A01G440600.1 | Wheat | cytosol | 18.73 | 27.02 |
| TraesCS2A01G362300.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 26.14 | 26.99 |
| TraesCS3A01G333900.1 | Wheat | cytosol, plastid | 32.91 | 26.45 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 25.29 | 25.67 |
| TraesCS7A01G399400.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 17.99 | 25.41 |
| TraesCS1A01G309500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.16 | 25.22 |
| TraesCS7A01G399600.1 | Wheat | plastid | 18.52 | 24.72 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 29.63 | 24.26 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 17.88 | 22.12 |
| TraesCS7A01G399300.1 | Wheat | cytosol | 12.49 | 21.53 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G030200.1 | EnsemblPlantsGene:TraesCS2A01G030200 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 |
| SUPFAM:SSF52540 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:13847469..13850306
Molecular Weight (calculated)
106087.0 Da
IEP (calculated)
7.499
GRAVY (calculated)
-0.085
Length
945 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDSSREILH TRRGFVGRDK EKDDILQLLI QPCAKSAVIS VVGEAGIGKT TLAQMVFTDA TVQEHFDVKC WVSVSSSSNK MELAAEILRS VLPAWDGSAD
101: KMLDFKMLQS ELRRALTSKR YLIVLDDVCN ITDETWMDML APLQSADTGS RIMATSRMDT MPHIFRASQL YTVNPLKSED CWTLLKEHAL PSDPGNVYQE
201: LHPIGKQIAE KINGSPLAAK LVGGLLGDTR STIHWMNIME KGLQDNAVFS ALCLSYKYLP VHLKRCFAYC SLFPEDYKFD PAHLFRLWIA EGFVQPQDRA
301: EKRMEDIARE YFDQLLSRSF FQEIKLGSKT YYLVHGLLHD LARSVAAEDC FRIDDGTNCD IPLTVRHLSV TMNSLPALTS FRSLKELRTL LIRPSLPSNS
401: SCSQEDFAVN LKSILEKSKQ LRVLDLSCFK SKELPQCIDD LLHLRYLSIH GSIQRLPESI GKLLHLQVLC FTGKCSFDKL PENVTMLVNL RHLLVETKCT
501: AGLAGIGRLA NLQGSLEFHS EKREGHRLEE LRNINGLHGL LKIKGLENVS SYEEACKAEL NKKTHLNSLN LEWSSASRNN PPPADVKVLE GLKPHQDIKV
601: LNLRRYCGAR APSWLPLLQQ LRSLHLTNCR SLTMLPPLGH LGSLRHLHMK ELCAVDCIGH EFYGTGDVAF PSLNFLEFDD FPRLHDWSGI AHGKSFPCLE
701: RLIIMDCPKL VKIPPLPPTT CEVTIERTQL LPYMRLAPFS SSSEKLQLDV CTTNVHFNGL LHEQHRGAIV AVNISGAEQF VATEEIGSLV SLQRLQLSRC
801: NFTDQNFSRF LQALPCLSSL EMIDLPNMTS LPASETLKFC TMLTELSIRN CQLLHSLSSL QFFDSLKVLV IERCPKITAT SFPLNFSSLS SLKVLRISYC
901: SELQSLPVCG LPSSLETLHI IGCHPELSKQ SRNRTAALVP SVPIQ
101: KMLDFKMLQS ELRRALTSKR YLIVLDDVCN ITDETWMDML APLQSADTGS RIMATSRMDT MPHIFRASQL YTVNPLKSED CWTLLKEHAL PSDPGNVYQE
201: LHPIGKQIAE KINGSPLAAK LVGGLLGDTR STIHWMNIME KGLQDNAVFS ALCLSYKYLP VHLKRCFAYC SLFPEDYKFD PAHLFRLWIA EGFVQPQDRA
301: EKRMEDIARE YFDQLLSRSF FQEIKLGSKT YYLVHGLLHD LARSVAAEDC FRIDDGTNCD IPLTVRHLSV TMNSLPALTS FRSLKELRTL LIRPSLPSNS
401: SCSQEDFAVN LKSILEKSKQ LRVLDLSCFK SKELPQCIDD LLHLRYLSIH GSIQRLPESI GKLLHLQVLC FTGKCSFDKL PENVTMLVNL RHLLVETKCT
501: AGLAGIGRLA NLQGSLEFHS EKREGHRLEE LRNINGLHGL LKIKGLENVS SYEEACKAEL NKKTHLNSLN LEWSSASRNN PPPADVKVLE GLKPHQDIKV
601: LNLRRYCGAR APSWLPLLQQ LRSLHLTNCR SLTMLPPLGH LGSLRHLHMK ELCAVDCIGH EFYGTGDVAF PSLNFLEFDD FPRLHDWSGI AHGKSFPCLE
701: RLIIMDCPKL VKIPPLPPTT CEVTIERTQL LPYMRLAPFS SSSEKLQLDV CTTNVHFNGL LHEQHRGAIV AVNISGAEQF VATEEIGSLV SLQRLQLSRC
801: NFTDQNFSRF LQALPCLSSL EMIDLPNMTS LPASETLKFC TMLTELSIRN CQLLHSLSSL QFFDSLKVLV IERCPKITAT SFPLNFSSLS SLKVLRISYC
901: SELQSLPVCG LPSSLETLHI IGCHPELSKQ SRNRTAALVP SVPIQ
001: MASATVDFGI GRILSVLENE TLLLSGVHGE IDKMKKELLI MKSFLEDTHK HGGNGSTTTT TQLFQTFVAN TRDLAYQIED ILDEFGYHIH GYRSCAKIWR
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
101: AFHFPRYMWA RHSIAQKLGM VNVMIQSISD SMKRYYHSEN YQAALLPPID DGDAKWVNNI SESSLFFSEN SLVGIDAPKG KLIGRLLSPE PQRIVVAVVG
201: MGGSGKTTLS ANIFKSQSVR RHFESYAWVT ISKSYVIEDV FRTMIKEFYK EADTQIPAEL YSLGYRELVE KLVEYLQSKR YIVVLDDVWT TGLWREISIA
301: LPDGIYGSRV MMTTRDMNVA SFPYGIGSTK HEIELLKEDE AWVLFSNKAF PASLEQCRTQ NLEPIARKLV ERCQGLPLAI ASLGSMMSTK KFESEWKKVY
401: STLNWELNNN HELKIVRSIM FLSFNDLPYP LKRCFLYCSL FPVNYRMKRK RLIRMWMAQR FVEPIRGVKA EEVADSYLNE LVYRNMLQVI LWNPFGRPKA
501: FKMHDVIWEI ALSVSKLERF CDVYNDDSDG DDAAETMENY GSRHLCIQKE MTPDSIRATN LHSLLVCSSA KHKMELLPSL NLLRALDLED SSISKLPDCL
601: VTMFNLKYLN LSKTQVKELP KNFHKLVNLE TLNTKHSKIE ELPLGMWKLK KLRYLITFRR NEGHDSNWNY VLGTRVVPKI WQLKDLQVMD CFNAEDELIK
701: NLGCMTQLTR ISLVMVRREH GRDLCDSLNK IKRIRFLSLT SIDEEEPLEI DDLIATASIE KLFLAGKLER VPSWFNTLQN LTYLGLRGSQ LQENAILSIQ
801: TLPRLVWLSF YNAYMGPRLR FAQGFQNLKI LEIVQMKHLT EVVIEDGAMF ELQKLYVRAC RGLEYVPRGI ENLINLQELH LIHVSNQLVE RIRGEGSVDR
901: SRVKHIPAIK HYFRTDNGSF YVSLSS
Arabidopsis Description
RPM1Disease resistance protein RPM1 [Source:UniProtKB/Swiss-Prot;Acc:Q39214]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.