Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G030200.1 | Wheat | cytosol | 78.86 | 93.55 |
| TraesCS2B01G043300.1 | Wheat | cytosol | 44.96 | 78.38 |
| TraesCS2B01G045700.1 | Wheat | mitochondrion | 80.11 | 74.21 |
| TraesCS2B01G043700.1 | Wheat | cytosol | 61.11 | 68.91 |
| TraesCS2B01G042500.1 | Wheat | cytosol | 67.44 | 67.2 |
| TraesCS2B01G042700.1 | Wheat | endoplasmic reticulum, mitochondrion, plastid, vacuole | 36.22 | 63.04 |
| TraesCS2B01G045400.1 | Wheat | cytosol, nucleus, plasma membrane | 45.76 | 45.89 |
| TraesCS2B01G044900.2 | Wheat | cytosol | 44.87 | 45.15 |
| TraesCS3B01G468200.1 | Wheat | cytosol | 37.38 | 36.95 |
| TraesCS1B01G269800.1 | Wheat | cytosol | 35.77 | 36.06 |
| TraesCS3B01G364900.1 | Wheat | cytosol | 30.06 | 30.17 |
| TraesCS1B01G320500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.28 | 28.05 |
| TraesCS5B01G444200.1 | Wheat | cytosol | 28.19 | 26.89 |
| TraesCS2B01G380100.1 | Wheat | cytosol, extracellular, nucleus, plastid | 25.69 | 26.45 |
| VIT_15s0024g00440.t01 | Wine grape | cytosol | 21.59 | 25.99 |
| TraesCS7B01G299800.2 | Wheat | extracellular, plasma membrane | 29.79 | 25.54 |
| VIT_15s0024g00400.t01 | Wine grape | cytosol, plasma membrane | 26.23 | 25.48 |
| VIT_15s0024g00450.t01 | Wine grape | cytosol | 14.81 | 21.73 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G044700.1 | EnsemblPlantsGene:TraesCS2B01G044700 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:AAA+_ATPase | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC |
| InterPro:P-loop_NTPase | PANTHER:PTHR23155 | PANTHER:PTHR23155:SF881 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg |
| SMART:SM00382 | SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF52540 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2B:+:21909243..21912608
Molecular Weight (calculated)
125585.0 Da
IEP (calculated)
7.755
GRAVY (calculated)
-0.129
Length
1121 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDVSACSGGL DPARLAKAPQ LLRSASQAME GLAADIHSSG GSGRKCAPGA SRCGGKTAAP ILEVLEAYLL EIWGISAAAE YKALALQARD AFYFNQDLQD
0101: TVDCRRFHSS NPSRVQFKPL PALRWCGWHC LPFGIVAPKP PKKIVKDIKV VNQETRKIGD LLDKGEDGSS RRRPPPPRMP DSSREILQTR VFIGRDKDKD
0201: DIVQMLIQPC ANSVICVVGD AGIGKTTIAQ MVFSDATVRE HFDVKCWVSV SSSSNKMELA AEILRSVLPA WDGSADKMVD FQMLQSELRR ALTSKRYLIV
0301: LDDVWNITDE TWMDMLAPLQ SADTGSRIMA TSRMDTMPHI FRASQLYTLN PLKSEDCWAL LKEHALPSDP CNVYQELHPI GKQIAEKING SPLAAKLVGG
0401: LLGDTRSKIH WMNIMEKGLQ DNAVFSALRL SYKYLPVHLK RCFAYCSLFP EDYKFDPAHL FRLWIAEGFV QPQDRAEKRM EDIAREYFDQ LLSRSFFQEI
0501: KLGSKTYYLV HGLLHDLARS VAAEDCFRID DGTNCDIPLT VRHLSVTMNS LPALTSFRSL KELRTLLIRP SLPSNSSCSQ EDFAVNLKDI LEKSKQLRVL
0601: DLSCFNSKEL PQCIDDLLHL RYLSIHGSIQ RLPESIGKLL HLQVLCFTGK CSFDKLPESV TMLVNLRHLL VETKCTAGLA GIGRLANLQG SLEFHIEKRE
0701: GHRLEELRNI NGLHGLLKIK GLENVSSYEE ACKAELNKKT HINSLNLEWS SASRNNPPPA DAKVLEGLKP HQDIKVLNLR RYCGNRAPSW LPLLQQLRSL
0801: HLTNCRSLTM LPPLGHLGSL RHLHMTELCA VDRIGHEFYG TGDVAFPSLN FLEFDDFPML HGWSGIAHGK SFPCLERLII MDCPELVKIP PFPPTTCEVT
0901: IERTQFLPYM RLAPFSSSSE KLQLDVCTTS VHFNGLLHEK HREAIVALNI SGAEQVVATE EIGSLVSLQR LQLSRCNFTD QNFSRFLQVL PCLLSLEIVD
1001: LPNMISLPAA ETLKFCTMLT ELSIRNCQLL HSLSSLQYFD SLKVLVIERC PKITATSFPL NFRSLSSLKV LRISYCSELQ SLPAYGLPSS LETLHIIGCH
1101: PELSKQSRNR AGHYVETCFG T
0101: TVDCRRFHSS NPSRVQFKPL PALRWCGWHC LPFGIVAPKP PKKIVKDIKV VNQETRKIGD LLDKGEDGSS RRRPPPPRMP DSSREILQTR VFIGRDKDKD
0201: DIVQMLIQPC ANSVICVVGD AGIGKTTIAQ MVFSDATVRE HFDVKCWVSV SSSSNKMELA AEILRSVLPA WDGSADKMVD FQMLQSELRR ALTSKRYLIV
0301: LDDVWNITDE TWMDMLAPLQ SADTGSRIMA TSRMDTMPHI FRASQLYTLN PLKSEDCWAL LKEHALPSDP CNVYQELHPI GKQIAEKING SPLAAKLVGG
0401: LLGDTRSKIH WMNIMEKGLQ DNAVFSALRL SYKYLPVHLK RCFAYCSLFP EDYKFDPAHL FRLWIAEGFV QPQDRAEKRM EDIAREYFDQ LLSRSFFQEI
0501: KLGSKTYYLV HGLLHDLARS VAAEDCFRID DGTNCDIPLT VRHLSVTMNS LPALTSFRSL KELRTLLIRP SLPSNSSCSQ EDFAVNLKDI LEKSKQLRVL
0601: DLSCFNSKEL PQCIDDLLHL RYLSIHGSIQ RLPESIGKLL HLQVLCFTGK CSFDKLPESV TMLVNLRHLL VETKCTAGLA GIGRLANLQG SLEFHIEKRE
0701: GHRLEELRNI NGLHGLLKIK GLENVSSYEE ACKAELNKKT HINSLNLEWS SASRNNPPPA DAKVLEGLKP HQDIKVLNLR RYCGNRAPSW LPLLQQLRSL
0801: HLTNCRSLTM LPPLGHLGSL RHLHMTELCA VDRIGHEFYG TGDVAFPSLN FLEFDDFPML HGWSGIAHGK SFPCLERLII MDCPELVKIP PFPPTTCEVT
0901: IERTQFLPYM RLAPFSSSSE KLQLDVCTTS VHFNGLLHEK HREAIVALNI SGAEQVVATE EIGSLVSLQR LQLSRCNFTD QNFSRFLQVL PCLLSLEIVD
1001: LPNMISLPAA ETLKFCTMLT ELSIRNCQLL HSLSSLQYFD SLKVLVIERC PKITATSFPL NFRSLSSLKV LRISYCSELQ SLPAYGLPSS LETLHIIGCH
1101: PELSKQSRNR AGHYVETCFG T
001: MAEAVVSFGV EKLWELLSRE SARLNGIDEQ VDGLKRQLGR LQSLLKDADA KKNETERVRN FLEDVKDIVY DADDIIESFL LNELRGKEKG IKKQVRTLAC
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
101: FLVDRRKFAS DIEGITKRIS EVIVGMQSLG IQHIADGGGR SLSLQERQRE IRQTFSRNSE SDLVGLDQSV EELVDHLVEN DSVQVVSVSG MGGIGKTTLA
201: RQVFHHDIVR RHFDGFSWVC VSQQFTRKDV WQRILQDLRP YDEGIIQMDE YTLQGELFEL LESGRYLLVL DDVWKEEDWD RIKAVFPHKR GWKMLLTSRN
301: EGLGLHADPT CFAFRPRILT PEQSWKLFER IVSSRRDKTE FKVDEAMGKE MVTYCGGLPL AVKVLGGLLA KKHTVLEWKR VHSNIVTHIV GKSGLSDDNS
401: NSVYRVLSLS YEDLPMQLKH CFFYLAHFPE DYKIDVKILF NYWVAEGIIT PFHDGSTIQD TGESYLEELV RRNMVVVEES YLTSRIEYCQ MHDMMREVCL
501: SKAKEENFIR VVKVPTTTST TINAQSPCRS RRLVLHSGNA LHMLGHKDNK KARSVLIFGV EEKFWKPRGF QCLPLLRVLD LSYVQFEGGK LPSSIGDLIH
601: LRFLSLYEAG VSHLPSSLGN LKLLLCLNLG VADRLLVHVP NVLKEMQELR YLRLPRSMPA KTKLELGDLV NLESLTNFST KHGSVTDLLR MTKLSVLNVI
701: FSGECTFETL LLSLRELRNL ETLSFHDFQK VSVANHGGEL LVLDFIHLKD LTLSMHLPRF PDQYRFPPHL AHIWLIGCRM EEDPMPILEK LLHLKSVYLS
801: SGAFLGRRMV CSKGGFPQLL ALKMSYKKEL VEWRVEEGSM PCLRTLTIDN CKKLKQLPDG LKYVTCLKEL KIERMKREWT ERLVIGGEDY YKVQHIPSVQ
901: FINCDH
Arabidopsis Description
RPP8L2Probable disease resistance RPP8-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P0C8S1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.